Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g0836 ATGTACTCTACAGATTCTACTAGTACGAGTACTTGGTACATGGGAAAGGGTCACGGTTTAGCATCCTTAAAAAACATGGATTCCGGCCATTGTGCCAATAATTTTGTGTGTAGGTCTATTATGACTATGGGTTATGGAACTACCTCTTCTGTTTCCTCACCAAGATCTGGAATAAGGTTCTATGATCCCAGATTTGAAGATCATCATCCTCACTTTCTTCAAGCTTGTTTTCTATGCAAGAAGCCACTTGGAGACAATAGTGACATCTTCATGTATAGAGGGGACACAGCATTTTGTAGCGAAGAGTGCAGGGCAGAACAAATAGAGTGTTCTCCCAACAAAGAGATAAACAAAGCTAAGGAGAAGAAAAAGAACCATTCATCATCCATGAAGGGTATGAAGAAAAAGGAACAAACAAGATCAGGGTCCCCAAACAAGGTCGAAGGTTACTCCTTCAGTACAGGGCCAGTTGCTGCTTAA 480 0.4125 MYSTDSTSTSTWYMGKGHGLASLKNMDSGHCANNFVCRSIMTMGYGTTSSVSSPRSGIRFYDPRFEDHHPHFLQACFLCKKPLGDNSDIFMYRGDTAFCSEECRAEQIECSPNKEINKAKEKKKNHSSSMKGMKKKEQTRSGSPNKVEGYSFSTGPVAA 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g0836 159 ProSiteProfiles Zinc finger FLZ-type profile. 71 115 IPR007650 -
Lal15g0836 159 Pfam zinc-finger of the FCS-type, C2-C2 65 110 IPR007650 -
Lal15g0836 159 PANTHER - 45 159 - -
Lal15g0836 159 Coils Coil 116 136 - -
Lal15g0836 159 MobiDBLite consensus disorder prediction 114 159 - -
Lal15g0836 159 PANTHER FCS-LIKE ZINC FINGER 1-RELATED 45 159 IPR044533 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g0836 Lal-Chr15 6244505 6246260 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal15g0836 - - lang:109337865 230.335
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal15g0836 15 6244505 6246260 Lal15g0836 15 6244505 6246260 ECH
Lal15g0836 15 6244505 6246260 Lal23g1258 23 13700331 13701870 LSH
Lal15g0836 15 6244505 6246260 Lal23g0764 23 10216514 10218153 LSH
Lal15g0836 15 6244505 6246260 Lal15g0836 15 6244505 6246260 PCT
Lal15g0836 15 6244505 6246260 Lal23g1258 23 13700331 13701870 PCT
Lal23g0764 23 10216514 10218153 Lal15g0836 15 6244505 6246260 PCT