Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g0764 ATGTATTCTTCAGATTCTAGTACTAGTGTGAGACCTTGTTACTTGGAAAAGAAACATGGTTTGGCATCCTTAAAAGACATAGATTCTGTTCATTGCGCCAATAACAGTTTTGTGTCTAGGTCTATGATGCCTATGACTATGGGTTATGCTGCAGCCACCTCTTCTGTTTCCTCACCAAGATTATATGGAAGAAGATTCTATGATGCTAGATTTGAAGATCACAAACCTCACTTCCTTCAAGCTTGTTTTCTATGCAAGAAGCCACTTGGAGATAATAGTGACATCTTCATGTATAGAGGGGACACACCATTTTGTAGTGAAGAGTGCAGGGCAGAGCAAATAGATATAGATGAAGCTAAAGAGAAGAAAAAGAACCTTTCTTCATCAATGAAGGTTATGAGGAACAAGGAACAAAGGAAATCAGGGTCCCCAAACAAGTCTCAAGGTTACTCCTTCCGTACAGGAGCAGTTGCTGCTTAA 480 0.3979 MYSSDSSTSVRPCYLEKKHGLASLKDIDSVHCANNSFVSRSMMPMTMGYAAATSSVSSPRLYGRRFYDARFEDHKPHFLQACFLCKKPLGDNSDIFMYRGDTPFCSEECRAEQIDIDEAKEKKKNLSSSMKVMRNKEQRKSGSPNKSQGYSFRTGAVAA 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g0764 159 PANTHER FCS-LIKE ZINC FINGER 1-RELATED 51 158 - -
Lal23g0764 159 Coils Coil 109 136 - -
Lal23g0764 159 PANTHER FCS-LIKE ZINC FINGER 1-RELATED 51 158 IPR044533 -
Lal23g0764 159 Pfam zinc-finger of the FCS-type, C2-C2 69 120 IPR007650 -
Lal23g0764 159 MobiDBLite consensus disorder prediction 120 141 - -
Lal23g0764 159 Gene3D Cysteine Rich Protein 60 154 - -
Lal23g0764 159 ProSiteProfiles Zinc finger FLZ-type profile. 77 121 IPR007650 -
Lal23g0764 159 MobiDBLite consensus disorder prediction 120 159 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g0764 Lal-Chr23 10216514 10218153 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal23g0764 - - aprc:113849917 226.868
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal23g0764 23 10216514 10218153 Lal23g0764 23 10216514 10218153 ECH
Lal15g0836 15 6244505 6246260 Lal23g0764 23 10216514 10218153 LSH
Lal23g0764 23 10216514 10218153 Lal15g0836 15 6244505 6246260 PCT
Lal23g0764 23 10216514 10218153 Lal23g1258 23 13700331 13701870 PCT