Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g1126 ATGGCGTTGCAAGAAAAGCTAGATAGATTCAAAAAGCAGCAAGAGAAGTGTCAATCGACGCTTGTATCTACGAAAGCTGCTCAAACCCTAAAATCATCATCTTCATCATCTACCAATGGAAGAGTTACTCCAATTCCTTCTGTCAAATTCTCAAACGATACTGAGAGGCTTCAACACATTAACTCTATTCGCAAAGCCCCCGTTGGTGCTCAGATGAAGCGTGTTATTGATCTCCTCTTTGAGACCCGTCAGGCTTTAACACCAGACCAGATTAATCAAGTATGCTATGTGGACATGAATGCTAATAGAAATGTTTTTGAAAGTATGAGGAAAAATCCTAAAATTAAATATGATGGGGAACGATTCTCTTACAAGTCGAAGCATGATGTTAGGGATAGAAAGGAGCTGCTTGTCCTGATACGTAAGTTTCTTGAGGGCATTGCTGTTATTGATTTAAAGGATGCTTACCCAACTGTGATGGAGGACTTGCAGAGTCCTGTGGTAACTGGGGTAAAAAGATGGCTTTTGAATGTCATTACTGAAGGAGTTCAGTTTTGTATCAATCATTTAGCAGCCTGGAGGGGAATTCCAGCTTTAAAAGCTGCAGGGCAGATTTGGCTTCTGTCCAACTTTGATTCACAGGAAGACATTGCTTACCCTAATGACCCCCGAGTCCCTATTAAGGTGGATGATGACCTAAAATTGCTCTTTCGGGGGATTGAATTGCCTCGTGATATGCTTGATATAGAGAAGGATCTCCTAAAGAATGGAATGAAGCCTGCTACTAACACTGCAAAGAGGAGAAGCACAGCACAAATGGAAGGCATTCCTGCCTCCAAGTCCAAGCCTAAGAAGAAGAACAAAGAAATCAGCAAGAGGACCAAGCTGACTAATGTCCATCTTCCAGAGCTTTTTCAGAATTTAAAGGGTGACTGA 936 0.4177 MALQEKLDRFKKQQEKCQSTLVSTKAAQTLKSSSSSSTNGRVTPIPSVKFSNDTERLQHINSIRKAPVGAQMKRVIDLLFETRQALTPDQINQVCYVDMNANRNVFESMRKNPKIKYDGERFSYKSKHDVRDRKELLVLIRKFLEGIAVIDLKDAYPTVMEDLQSPVVTGVKRWLLNVITEGVQFCINHLAAWRGIPALKAAGQIWLLSNFDSQEDIAYPNDPRVPIKVDDDLKLLFRGIELPRDMLDIEKDLLKNGMKPATNTAKRRSTAQMEGIPASKSKPKKKNKEISKRTKLTNVHLPELFQNLKGD 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g1126 311 Pfam TFA2 Winged helix domain 2 131 164 IPR040501 -
Lal23g1126 311 ProSiteProfiles TFIIE beta central core DNA-binding domain profile. 56 131 IPR003166 GO:0006367
Lal23g1126 311 MobiDBLite consensus disorder prediction 262 276 - -
Lal23g1126 311 PANTHER BNAA02G21830D PROTEIN 197 309 - -
Lal23g1126 311 PANTHER BNAA02G21830D PROTEIN 1 166 - -
Lal23g1126 311 MobiDBLite consensus disorder prediction 258 295 - -
Lal23g1126 311 Pfam TFIIE beta subunit core domain 70 130 IPR003166 GO:0006367
Lal23g1126 311 PANTHER TRANSCRIPTION INITIATION FACTOR IIE, BETA SUBUNIT 1 166 IPR016656 GO:0005673|GO:0006367
Lal23g1126 311 PANTHER TRANSCRIPTION INITIATION FACTOR IIE, BETA SUBUNIT 197 309 IPR016656 GO:0005673|GO:0006367
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g1126 Lal-Chr23 12792222 12802689 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal23g1126 K03137 - cpap:110811575 396.741
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal15g0071 15 494683 497378 Lal23g1126 23 12792222 12802689 LSH
Lal23g1126 23 12792222 12802689 Lal15g1378 15 15917194 15921214 PCT