Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g1378 ATGCAACTCGTCGGGTTCTCGCTTAAGCGAGCCCATTCTCGCTCAAACGAGAAAATCCCACTCATTTTAAAAAACTCAGATCTGACCCTCTCGCCCAGGCGAGGGAACTCTCGCCAAGGCGAGGCAGCTCTCGCTCAAGCGAGGATCCCAGGTGAGACAACTCTCACTCAGGCGAGATCCAAAATGTCACTTTTCTCGCCCAGGCGAGACAACTCTCACTCAGGCGAGATCACTCTCGCTCAAGCGAGAATCCTTCAGTATAACCCAAAATTTCACCCTCCCAGTGAATTACTATCAGAGATGTCATTGCAAGAGAGTCTAGAGAGATTCAAGAAGCAACAAGAAAAGTGTCATTCAACACTTTCAAGCATTGCAAATGGAAGAAATTCGGTTCCTTCTTCTTCTGCTGCTGTTGTTAAATTCTCCAATGACACGGAGCGTCTTCAACATATTAACAGCATTCGTAAAGCCCCCGTTGGTGCTCAGATGAAGCGTGTTATCGATCTCTTGTTCGAGACCCGAAAGGCTTTTACACCAGAGCAAATAAATGAAGCATGCCATGTTGACATGAAGGCTAATAAAGATGTTTTTGACAGTCTGAGGAAAAATCCAAAAGTGAAGTATGATGGGCAACGATTCTCGTACAAGTCAAAGCATAACCTTAAGGACAAACATCAGCTTCTTCAGCTGATACGCAAGTTTCCAGAGGGTATTGCTGTTATTGACCTAAAAGATGCTTACCCCACTGTGATGGAGGACCTTCAGGCTTGGAAAGCCGCAGGGCAGATTTGGCTGCTGTCCAACTTCGATTCGCAGGAAGACATTGCATACCCTAATGACCCCAAATTGCCCGTTAAGGTGGATGATGACCTAAAACAGCTTTTTCGGAGTATCGAATTGCCTCGCGATATGATTGATATAGAGAAAGACCTTCAAAAGAATGGAATGAAGCCCGCCACCAACACTGCAAAGAGAAGAAGTGCAGCGCAAATTCAAGGTGCTTCTCCCAAGCCCAAGACTAAGAAGAAGAAGAGTGAAATTAGCAAGAGGACCAAGCTGACCAATGCCCATCTTCCTGAACTTTTTCAGAACTTAAACGGTTCTTGA 1107 0.4553 MQLVGFSLKRAHSRSNEKIPLILKNSDLTLSPRRGNSRQGEAALAQARIPGETTLTQARSKMSLFSPRRDNSHSGEITLAQARILQYNPKFHPPSELLSEMSLQESLERFKKQQEKCHSTLSSIANGRNSVPSSSAAVVKFSNDTERLQHINSIRKAPVGAQMKRVIDLLFETRKAFTPEQINEACHVDMKANKDVFDSLRKNPKVKYDGQRFSYKSKHNLKDKHQLLQLIRKFPEGIAVIDLKDAYPTVMEDLQAWKAAGQIWLLSNFDSQEDIAYPNDPKLPVKVDDDLKQLFRSIELPRDMIDIEKDLQKNGMKPATNTAKRRSAAQIQGASPKPKTKKKKSEISKRTKLTNAHLPELFQNLNGS 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g1378 368 Pfam TFA2 Winged helix domain 2 222 279 IPR040501 -
Lal15g1378 368 Pfam TFIIE beta subunit core domain 161 220 IPR003166 GO:0006367
Lal15g1378 368 PANTHER BNAA02G21830D PROTEIN 101 367 - -
Lal15g1378 368 MobiDBLite consensus disorder prediction 315 329 - -
Lal15g1378 368 ProSiteProfiles TFIIE beta central core DNA-binding domain profile. 147 222 IPR003166 GO:0006367
Lal15g1378 368 MobiDBLite consensus disorder prediction 313 368 - -
Lal15g1378 368 PANTHER TRANSCRIPTION INITIATION FACTOR IIE, BETA SUBUNIT 101 367 IPR016656 GO:0005673|GO:0006367
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g1378 Lal-Chr15 15917194 15921214 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal15g1378 K03137 - gmx:100802433 434.876
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal15g1378 15 15917194 15921214 Lal15g1378 15 15917194 15921214 ECH
Lal15g0071 15 494683 497378 Lal15g1378 15 15917194 15921214 PCT
Lal23g1126 23 12792222 12802689 Lal15g1378 15 15917194 15921214 PCT