Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g0071 ATGGCGTTGCAAGAAAAGCTAGATAGATTCAAAAAGCAGCAAGAGAAGTGTCAATCGACGCTTGTATCTACCAAAGCTGCTCAAACCCTAAAATCACCATCTTCATCATCTACCAATGGAAGAGTTACTCCAATTCCTTCTGTCAAATTCTCAAACGATACTGAGAGGCTTCAACACATTAACTCTATTCGTAAAGCCCCCGTTGGTGCTCAGATGAAGCGTGTTATTGATCTCCTCTTTGAGACCCGTCAGGCTTTAACACCAGACCAGATTAATCAAGTATGCTATGTGGACATGAATGCTAATAGAAATGTTTTTGAAAGTATGAGGAAAAATCCTAAAATTAAATATGATGGGGAACGATTCTCTTACAAGTCGAAGCATGATGTTAGGGATAAAAAAGAGCTGCTTGTCCTGATACGTAAGTTTCTTGAGGGCATTGCTGTTATTGATTTAAAGGATTCTTACCCAACTGTGATGGAGGACTTGCAGGCTTTAAAAGCTGCAGGGCAGATTTGGCTTCTGTCGAACTTTGATTCACAGGAAGACATTGCTTACCCCAATGACCCCCGAGTCCCTATTAAGGTGGATGATGACCTAAAACTGCTTTTTCGTGGGATTGAATTGCCTCGTGATATGCTTGATATAGAGAGGGATCTCCTAAAGAATGGAATGAAGCCTGCTACTAACACTGCAAAGAGGAGAAGCACAGCACAAATGGAAGGCATTCCTGCCTCCAAGTCCAAGCCTAAGAAGAAGAACAAAGAAATCAGCAAGAGGACCAAGCTCACTAATGTCCATCTTCCAGAGCTTTTTCAGAATTTAAAGGGTGACTGA 837 0.4158 MALQEKLDRFKKQQEKCQSTLVSTKAAQTLKSPSSSSTNGRVTPIPSVKFSNDTERLQHINSIRKAPVGAQMKRVIDLLFETRQALTPDQINQVCYVDMNANRNVFESMRKNPKIKYDGERFSYKSKHDVRDKKELLVLIRKFLEGIAVIDLKDSYPTVMEDLQALKAAGQIWLLSNFDSQEDIAYPNDPRVPIKVDDDLKLLFRGIELPRDMLDIERDLLKNGMKPATNTAKRRSTAQMEGIPASKSKPKKKNKEISKRTKLTNVHLPELFQNLKGD 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g0071 278 PANTHER TRANSCRIPTION INITIATION FACTOR IIE, BETA SUBUNIT 1 276 IPR016656 GO:0005673|GO:0006367
Lal15g0071 278 PANTHER BNAA02G21830D PROTEIN 1 276 - -
Lal15g0071 278 MobiDBLite consensus disorder prediction 24 46 - -
Lal15g0071 278 ProSiteProfiles TFIIE beta central core DNA-binding domain profile. 56 131 IPR003166 GO:0006367
Lal15g0071 278 MobiDBLite consensus disorder prediction 225 264 - -
Lal15g0071 278 Pfam TFIIE beta subunit core domain 70 130 IPR003166 GO:0006367
Lal15g0071 278 Pfam TFA2 Winged helix domain 2 131 188 IPR040501 -
Lal15g0071 278 MobiDBLite consensus disorder prediction 229 243 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g0071 Lal-Chr15 494683 497378 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal15g0071 K03137 - jre:108990514 421.009
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal15g0071 15 494683 497378 Lal15g0071 15 494683 497378 ECH
Lal15g0071 15 494683 497378 Lal23g1126 23 12792222 12802689 LSH
Lal15g0071 15 494683 497378 Lal15g1378 15 15917194 15921214 PCT