Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g1114 ATGAATAACTCGAAAGGCCGTGACAATGATAGTTTGGGTGTGAACAAAATGGGAAAGAATATAAGGAAGAGTCCTTTACACCAGCCCAATTTTAGTAATAATGCTGCTAGACAACAGCCTCAACCTCAGGTTTACAACATAAGCAAAAATGATTTCCGGGATATTGTTCAGCAGCTTACTGGATCGCCTTCGCACCACTCGCAGGATCATCCACCTAGACCTCTGAACAATCAACCCAAACTGCAGAGTATGCGTCTTCAAAAAATTAGACCTCCCCCATTGACACCTATTAATCGACCACACATGCCCCCGCAAATGCCGGTGTATACAGCCCCTCCTCCAATGCCTTACAATAATGCCATACCTAGACCACCTGCTCAGTTTGGACAACCATCTCCTACTCCTTTGCAACCATTAACGTCAGGGGATCTGTGGGCTAATACTGCTGAATCACCCATCTCTGCTTACATGCGTTACCTTCAAAATTCAATGAATGAACCAAGTCCCTGGGGTAACCAAGTTCACCCTCAACCACATCCACATCAACACCCTCAACCACATCCACATCAACACCCTCAACCGCATCCACATCAATACCCTCAACCGCATCCACAACAACACCCTCAACCACATCCACAACAACACCCTCAACCACATCCACACCCGCAATCCCAAGTACCAGGCAATGTCCAGCCTCAACCACCTTCATCTGCTTTGCTTCCTAATCCTCACATGCCTGCATTTCCATCTCCAAGATTTAATGGTCCTATCCCACATATGAATGCTAATAACCACCTTCCAATGCCTAGTCTTCCTTCCCCACAAAGAAATGGCCCTCCCCCTTTACTTTCTCCTACCTCTCAATTCCTCATGGCTTCTCCAACTGGTTACATGAATTTGCTATCCCCTCGGTCACCTTATCCGCTGCTGTCACCTGGCATTCAATTTCCTTCTCCCCTTTCACCTGGTTTTCCATTCTCACCCATTGCACAATCAAGGATTTTAGGTCCTGGCCCTCAACATCCACATTCTCCAGGCATTATGTTTCCATCATCTCCTTCAGGGTTTTTCCCAATGTCAAGTCCTAGGCTATATTTTGAAGATCAGACAACTCAATTGGACAGCTGGACAGGATCTGATCTTTTCAGAGTCAAAGAGAAGGCAATATAG 1170 0.4615 MNNSKGRDNDSLGVNKMGKNIRKSPLHQPNFSNNAARQQPQPQVYNISKNDFRDIVQQLTGSPSHHSQDHPPRPLNNQPKLQSMRLQKIRPPPLTPINRPHMPPQMPVYTAPPPMPYNNAIPRPPAQFGQPSPTPLQPLTSGDLWANTAESPISAYMRYLQNSMNEPSPWGNQVHPQPHPHQHPQPHPHQHPQPHPHQYPQPHPQQHPQPHPQQHPQPHPHPQSQVPGNVQPQPPSSALLPNPHMPAFPSPRFNGPIPHMNANNHLPMPSLPSPQRNGPPPLLSPTSQFLMASPTGYMNLLSPRSPYPLLSPGIQFPSPLSPGFPFSPIAQSRILGPGPQHPHSPGIMFPSSPSGFFPMSSPRLYFEDQTTQLDSWTGSDLFRVKEKAI 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g1114 389 MobiDBLite consensus disorder prediction 1 79 - -
Lal23g1114 389 PANTHER PROTEIN HAIKU1 1 226 IPR039612 -
Lal23g1114 389 PANTHER PROTEIN HAIKU1 229 364 IPR039612 -
Lal23g1114 389 MobiDBLite consensus disorder prediction 164 285 - -
Lal23g1114 389 PANTHER PROTEIN HAIKU1 1 226 IPR039825 GO:0009960|GO:0080113
Lal23g1114 389 PANTHER PROTEIN HAIKU1 229 364 IPR039825 GO:0009960|GO:0080113
Lal23g1114 389 MobiDBLite consensus disorder prediction 25 79 - -
Lal23g1114 389 MobiDBLite consensus disorder prediction 191 253 - -
Lal23g1114 389 Pfam VQ motif 40 65 IPR008889 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g1114 Lal-Chr23 12709300 12713052 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal23g1114 - - aprc:113868951 473.011
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal23g1114 23 12709300 12713052 Lal23g1114 23 12709300 12713052 ECH
Lal16g0471 16 2925791 2926729 Lal23g1114 23 12709300 12713052 LSH
Lal15g0414 15 2793449 2795319 Lal23g1114 23 12709300 12713052 LSH