Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g0471 ATGGGAAAGAATATAAGGAAGAGTCCTTTACACCAGCCCAATTTTGGCAATAATGCTGCTAGACAACAACCCCAGCCTCAGGTTTATAACATAAGCAAGAATGATTTCAGGGATATTGTTCAGCAGCTTACTGGATCGCCCTCGCACCACTCGCAGGATCATCCACCTAGGCCTCCTAACAATCCACCCAAACCGCAGAGTATTCGTCTTCAAAAAATTAGACCTCCTCCGTTGAATCCTATCAATCGACCACAAATGTCCCACCAAATGCCAGTATACACAGCCCCTCCTCCAATGCCTTACAGTAACGCCATACCCAGGCCACCTGCTCAGTTTGGACAGCCATCTCCTACTCCTTTGCAGCCATTAACACCGGGGAATCTATGGGCTAATACTACTGATTCACCCATCTCCGCTTACATGCGTTACCTTCAAAATTCTATGAATGAACCAAGTCCCTGGGGTAACCAAGTTCAACCTCAACTACATCCACACCCTCAATCCCAAGTACCGGGCAATGTCCAGCAGCCTCAACCACCTTCATCTGCTTTGCTTCCTAGTCCTCACATGCTGGCATTCCCTTCTCCAAGATTTAATGGTCCTATTCCACCTATGAATGCTAGTAACCACCGTCCGATGCCTAGCCTTCCTTCCCCACAAGGAAATGGCCCTGCCTTTTTGCCTTCTCCAACCTCTCAATTCCTCCTGCCTTCTCCAACTGGTTACATGAATTTGCTATCCCCTCGGTCACCTTATCCGCTGCTGTCACCTGGCATTCAGTTTCCATCTCCCCTTACACCTGGTTTTCCATTCTCACCCATCGCACAATCAAGTATTTTAGGCCCTGGCCCTCAACATCCACCCTCTCCAGGCATTATGTTTCCATTATCCCCTTCAGGATTTTTCCCTATGTCAAGTCCTAGGTGGAGAGATCATTAG 939 0.4814 MGKNIRKSPLHQPNFGNNAARQQPQPQVYNISKNDFRDIVQQLTGSPSHHSQDHPPRPPNNPPKPQSIRLQKIRPPPLNPINRPQMSHQMPVYTAPPPMPYSNAIPRPPAQFGQPSPTPLQPLTPGNLWANTTDSPISAYMRYLQNSMNEPSPWGNQVQPQLHPHPQSQVPGNVQQPQPPSSALLPSPHMLAFPSPRFNGPIPPMNASNHRPMPSLPSPQGNGPAFLPSPTSQFLLPSPTGYMNLLSPRSPYPLLSPGIQFPSPLTPGFPFSPIAQSSILGPGPQHPPSPGIMFPLSPSGFFPMSSPRWRDH 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g0471 312 MobiDBLite consensus disorder prediction 1 120 - -
Lal16g0471 312 PANTHER PROTEIN HAIKU1 1 311 IPR039612 -
Lal16g0471 312 MobiDBLite consensus disorder prediction 148 180 - -
Lal16g0471 312 MobiDBLite consensus disorder prediction 148 227 - -
Lal16g0471 312 MobiDBLite consensus disorder prediction 91 120 - -
Lal16g0471 312 MobiDBLite consensus disorder prediction 10 51 - -
Lal16g0471 312 Pfam VQ motif 24 49 IPR008889 -
Lal16g0471 312 PANTHER PROTEIN HAIKU1 1 311 IPR039825 GO:0009960|GO:0080113
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g0471 Lal-Chr16 2925791 2926729 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g0471 - - aprc:113868951 476.863
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g0471 16 2925791 2926729 Lal16g0471 16 2925791 2926729 ECH
Lal16g0471 16 2925791 2926729 Lal15g0414 15 2793449 2795319 LSH
Lal16g0471 16 2925791 2926729 Lal23g1114 23 12709300 12713052 LSH