Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g0414 ATGAATAACTCGAACAGCAGGAATAATGATAGTTTAGGTGTGAACAAGACGGGGAAGAATATAAGGAAGAGCCCTTTACACCAGCCAAATTTTGGTAATAATGCTGCTAAACAACAGCCTCAACCTCAGGTTTACAACATCAGCAAGAATGATTTCAGGGATATTGTTCAGAAGCTTACTGGATCGCCCTCGCACCACTCACAGGATCATCCACCTAGACCTCCGAACAATCCACACAAACCACAGAGTATGCGTCTTCAAAAAATTAGACCTCCCCCGTTGACACCTATCAATCGACCATGCATGCCGTCACAAATGCCAGTATACACAGCCTCTCCCCAAATTCCTTATAACAATGCCATACCTAGACCACCTGCTCAGTTTGGACAACCATCTCCTACTCCTTTGCAACCATTAACACCCGGGGATCTATGGGCTAATACTACTGAGTCACCCATCTCCGCTTACATGCGTTACCTTCAAAATTCAATGAATGAACCGAGTCCCTGGGGTAACCAAGTTCACCCTCAATACCAATTACCAGGCAATGACCATCCTCAACCACCTTCATCTGCTTTGCTACCTAATCCTCCCATGCCAGTGTTTCCTTCTCCAATATGTAACGGTCCTATTCCATCAATGAATGCTAGTAACCACCCTCCAATGCCTTCTCTTCCTTCCCCACAAGCAAATGGCCCTCCCCTTTTACCTTCCCCTACCTCTCAATTCCTTCTGCCTTCTCCAACTGGTTACATGAATTTGTTATCCCCTCGATCACCTTATCCACTGTTTCCACCTGACTTTCAGTTTCCATCTCCCCGTACACCCAAATTTCCATTCTCACCCATTGCACAATCAGGGATTTTTGGTCCTGGCCCTCAGCATCCACCTTCTCCAGGAATTATGTTTCCACTATCTCCTTCAGGGTTTTTCCCCATACCAAGTCCTAGGGTGATTCTTTTCACTTTAACAAGTTTTACGTCAGGCTATATACTGAAGATCGAACAACTCAATTGGATAGATGGACAGAAACGGCTTCAAGTTGTTAATGACTTCCTTCTATCTGATTATGAATATGTTACTGTTCTTTTACCACCCAGACACTTCATCTAG 1113 0.4456 MNNSNSRNNDSLGVNKTGKNIRKSPLHQPNFGNNAAKQQPQPQVYNISKNDFRDIVQKLTGSPSHHSQDHPPRPPNNPHKPQSMRLQKIRPPPLTPINRPCMPSQMPVYTASPQIPYNNAIPRPPAQFGQPSPTPLQPLTPGDLWANTTESPISAYMRYLQNSMNEPSPWGNQVHPQYQLPGNDHPQPPSSALLPNPPMPVFPSPICNGPIPSMNASNHPPMPSLPSPQANGPPLLPSPTSQFLLPSPTGYMNLLSPRSPYPLFPPDFQFPSPRTPKFPFSPIAQSGIFGPGPQHPPSPGIMFPLSPSGFFPIPSPRVILFTLTSFTSGYILKIEQLNWIDGQKRLQVVNDFLLSDYEYVTVLLPPRHFI 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g0414 370 MobiDBLite consensus disorder prediction 60 97 - -
Lal15g0414 370 MobiDBLite consensus disorder prediction 167 197 - -
Lal15g0414 370 MobiDBLite consensus disorder prediction 1 46 - -
Lal15g0414 370 PANTHER PROTEIN HAIKU1 1 318 IPR039825 GO:0009960|GO:0080113
Lal15g0414 370 MobiDBLite consensus disorder prediction 167 186 - -
Lal15g0414 370 Pfam VQ motif 40 65 IPR008889 -
Lal15g0414 370 MobiDBLite consensus disorder prediction 212 231 - -
Lal15g0414 370 PANTHER PROTEIN HAIKU1 1 318 IPR039612 -
Lal15g0414 370 MobiDBLite consensus disorder prediction 216 231 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g0414 Lal-Chr15 2793449 2795319 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal15g0414 - - aprc:113868951 500.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal15g0414 15 2793449 2795319 Lal15g0414 15 2793449 2795319 ECH
Lal16g0471 16 2925791 2926729 Lal15g0414 15 2793449 2795319 LSH
Lal15g0414 15 2793449 2795319 Lal23g1114 23 12709300 12713052 LSH