Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g1032 ATGCTTCCCCTTCGATTAAACGCCGTCGTTTTGCCCTTCATTCTATGTCTCCTCTTCAAACGCTTCTGCTTCGGCATCCGTACCTTCCCAACCTCCACCTTCGCTGCTTCCACTGACCAAAGCCTCTTCCATTTCACGGAGGCGCCAGAATACCGAAACGGAGCGTTTTGTTCCGGGTCGGGTAACCGGGTTTCATCCCTATCATGCGACCCATCTCTGGTTCACATCGCCATGACCCTCGACTCCGGCTATCTCCGCGGCTCCATCGCTGCCGTTCACTCCGTCCTCCGCCACTCTTCATGCCCAGAGAACGTGTTCTTCCATTTCATATCCGCGGAGTTCGACCCGGTTTCCCCACGGGTCCTGACCCGGTTAGTTCTATCCACTTTCCCTTCTTTGAACTTCAAAGTTTACATCTTTAGAGAAGACAGAGTCATAAACCTAATCTCTTCTTCAATAAGACGAGCCCTTGAAAACCCATTGAACTACGCAAGGAACTACCTCGGTGAAATTCTTGACCCTTGTGTTGAACGAGTTGTCTACCTTGACTCGGACATAATCGTAGTTGATGACATACACAAGCTCTGGAACATGTCACTCTCCGGTACACGTGTGATTGGTGCACCAGAATATTGCCACGCAAATTTCACTAAGTACTTCACCGATGAATTCTGGAACGACCCTTTGTTGACACGTGTATTTTCTTCTAGAAATCCGTGTTATTTCAACACTGGGGTGATGATAATGGACTTGGTAAGGTGGAAGGAGGGGAATTATAGGGAAAAGGTTGAAGCTTGGATGGAGTTGCAAAAGAAGAAGAGGATTTATGAGTTGGGGTCATTGCCACCTTTTTTGCTTGTATTTGGTGGGAATGTTGAGGCTATAGATCATAGGTGGAACCAGCATGGGTTAGGTGGGGATAATGTGAATGGGGTGTGTAGGTCATTGCATCCTGGTCCTGTTAGTCTTTTGCATTGGAGTGGGAAAGGGAAACCTTGGGTTAGGCTTGATGAGAAGAATCCTTGTCCTTTGGATATTCTTTGGGAGCCTTATGATTTGTATAAGCCATATCTTGTTCATCATCACAACAGGGAAAAGGAGGAGGAGGAGCAGAATTTGAGCTTCTCTTCTTCCACATTGGTTGATTTAGATTGGTTAGAAGAAGACATTCTTGTAAGCATGTCTCCAACAAAAATGAAACCAACGTGA 1209 0.4648 MLPLRLNAVVLPFILCLLFKRFCFGIRTFPTSTFAASTDQSLFHFTEAPEYRNGAFCSGSGNRVSSLSCDPSLVHIAMTLDSGYLRGSIAAVHSVLRHSSCPENVFFHFISAEFDPVSPRVLTRLVLSTFPSLNFKVYIFREDRVINLISSSIRRALENPLNYARNYLGEILDPCVERVVYLDSDIIVVDDIHKLWNMSLSGTRVIGAPEYCHANFTKYFTDEFWNDPLLTRVFSSRNPCYFNTGVMIMDLVRWKEGNYREKVEAWMELQKKKRIYELGSLPPFLLVFGGNVEAIDHRWNQHGLGGDNVNGVCRSLHPGPVSLLHWSGKGKPWVRLDEKNPCPLDILWEPYDLYKPYLVHHHNREKEEEEQNLSFSSSTLVDLDWLEEDILVSMSPTKMKPT 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g1032 402 PANTHER GLYCOSYLTRANSFERASE 8 DOMAIN-CONTAINING PROTEIN 11 366 - -
Lal23g1032 402 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 75 342 IPR029044 -
Lal23g1032 402 SUPERFAMILY Nucleotide-diphospho-sugar transferases 74 355 IPR029044 -
Lal23g1032 402 PANTHER GALACTURONOSYLTRANSFERASE-LIKE 9-RELATED 11 366 - -
Lal23g1032 402 Pfam Glycosyl transferase family 8 75 335 IPR002495 GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g1032 Lal-Chr23 12124696 12127871 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal23g1032 6 377 Glycosyltransferase AT1G70090 72.823 0.0 556
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal23g1032 - - vra:106762685 617.076
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal23g1032 23 12124696 12127871 Lal23g1032 23 12124696 12127871 ECH
Lal16g0573 16 3688149 3689306 Lal23g1032 23 12124696 12127871 LSH
Lal15g0514 15 3550592 3551749 Lal23g1032 23 12124696 12127871 LSH