Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g0514 ATGCTTCCCCCACGCTTAAACGCTGTCGTTTTATCCCTCATTCTATATCTCCTCTTCCAACCCTTCTGCTTCGGTATCCGTTCCTTCCCAACCTCCGCCGTCTCTGCCGCCGGAAACGGCCTCTTCCACTTCATTGAGGCTCCAGATTACAGAAACGGAGCGGGTTGTAGCGGATCGGGTAACCGGGTATTGTCCTTATCATGTGACCCGTCTTTAGTCCACATCGCCATGACCCTCGACTCCGGTTACCTCCGTGGCTCAATCGCCGCCGTGCACTCTGTCCTCCGCCACTCATCATGCCCGGAGAACGTGTTCTTCCATTTCATATCAGCAGAGTTCGACCCGGTTAGTCCACGGGTCCTGACCCGTTTAGTTCGATCCACTTTCCCTTCTCTGAACTTCAAAGTTTACATCTTTAGAGAAGACAAAGTCATAAACCTTATCTCCTCTTCAATAAGACAAGCCCTAGAAAACCCATTAAACTACGCAAGAAACTACCTTGGTGACATGCTTGACCCATGCGTTGACCGAGTTATCTACCTTGACTCAGACGTAATCGTAGTTGATGACATACACAAGCTTTGGAGCATGCCACTCACCGGCGCACGTGTGATCGGAGCACCGGAATATTGCCACGCGAATTTCACAAAGTACTTCACCGATGAGTTCTGGAGTGACCCTTTGTTGGCACGTGTGTTTTATTCTAGAAGGCCGTGTTATTTCAACACTGGGGTGATGATAATGGACTTGGTGAAGTGGAGGGAAGGGAATTATAGGAAAAAGATTGAAGCTTGGATGCAGTTGCAGAAAAAGAAGAGGATTTATGAGTTGGGGTCATTGCCACCTTTTTTGCTTGTTTTTGGTGGGAATGTTGAGGCTATAGAGCATAGATGGAATCAACATGGGCTTGGTGGTGATAACATGAATGGGATTTGTAGGTCATTGCATCCTGGACCTGTTAGTCTTTTGCATTGGAGTGGGAAAGGGAAACCTTGGGTGAGGCTTGATGAAAAGAATCCTTGTCCTTTGGATAGTCTTTGGGAGCCTTATGATTTGTATAAGCTACATCTTGTTCATCAGCACAATATGGCAAAGGAGGAGCAGAATTGGAGTTTTTCTTCTTCCATATTGGTTGGTCATGCCCATGATTTGTTATGA 1158 0.4689 MLPPRLNAVVLSLILYLLFQPFCFGIRSFPTSAVSAAGNGLFHFIEAPDYRNGAGCSGSGNRVLSLSCDPSLVHIAMTLDSGYLRGSIAAVHSVLRHSSCPENVFFHFISAEFDPVSPRVLTRLVRSTFPSLNFKVYIFREDKVINLISSSIRQALENPLNYARNYLGDMLDPCVDRVIYLDSDVIVVDDIHKLWSMPLTGARVIGAPEYCHANFTKYFTDEFWSDPLLARVFYSRRPCYFNTGVMIMDLVKWREGNYRKKIEAWMQLQKKKRIYELGSLPPFLLVFGGNVEAIEHRWNQHGLGGDNMNGICRSLHPGPVSLLHWSGKGKPWVRLDEKNPCPLDSLWEPYDLYKLHLVHQHNMAKEEQNWSFSSSILVGHAHDLL 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g0514 385 Pfam Glycosyl transferase family 8 74 334 IPR002495 GO:0016757
Lal15g0514 385 PANTHER GLYCOSYLTRANSFERASE 8 DOMAIN-CONTAINING PROTEIN 9 364 - -
Lal15g0514 385 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 74 350 IPR029044 -
Lal15g0514 385 PANTHER GALACTURONOSYLTRANSFERASE-LIKE 9-RELATED 9 364 - -
Lal15g0514 385 SUPERFAMILY Nucleotide-diphospho-sugar transferases 73 355 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g0514 Lal-Chr15 3550592 3551749 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal15g0514 6 374 Glycosyltransferase AT1G70090 73.740 0.0 566
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal15g0514 - - vra:106762685 643.654
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal15g0514 15 3550592 3551749 Lal15g0514 15 3550592 3551749 ECH
Lal16g0573 16 3688149 3689306 Lal15g0514 15 3550592 3551749 LSH
Lal15g0514 15 3550592 3551749 Lal23g1032 23 12124696 12127871 LSH