Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g0467 ATGGAGAATTTAATCTCTTTGGTGAACAAAATCCAGCGAGCTTGCACCGCCTTAGGTGACCACGGCGAAGCCAGTGCCCTCCCCACTCTATGGGACTCCCTCCCTGCTATCGCCGTCGTTGGTGGCCAGAGCTCTGGAAAGTCTTCAGTGTTGGAAAGCGTTGTCGGCAAAGATTTCTTACCTCGTGGATCAGGGATTGTGACTCGGCGACCTCTTGTGTTGCAGCTTCACAAAATTGAAGAGGGAAGCAGAGAGTATGCTGAGTTTCTTCACCTTCCAAGGAAAAGGTTCACTGATTTCGTTGCTGTGAGGAAGGAGATTTCAGATGAAACTGATAGGGAGACTGGACGAAGCAAACAAATTTCAACTGTCCCAATTCATCTTAGTATATATTCACCTAATGTTGTTAACTTGACGCTCATTGATCTTCCCGGGCTTACGAAGGTAGCTGTAGAGGGTCAATCAGATAGTATTGTGCAAGACATTGAGAATATGGTTCGCTCCTACATTGAGAAGCCGAACTGTATAATTTTGGCTATTTCACCAGCCAATCAAGATCTTGCAACATCTGACGCAATTAAAATTTCCCGTGAAGTGGACCCTACTGGGGAGAGGACCATTGGCGTTTTGACGAAGATTGATCTTATGGACAAGGGTACTGACGCTGTTGAAATATTGGAAGGGAGAGCTTTTAAGTTAAAGTTTCCATGGATTGGTGTTGTGAATAGATCACAACAAGATATAAACAAGAATGTTGACATGATTGCTGCCAGGCGTAGAGAACGTGAGTACTTTGCTAGCACCCCTGAATATAGACACCTTGCTCACAGGATGGGTTCTGAGCATCTAGCTAAGATGCTATCAAAGTGGCTTCCATTGGCTAAATCACAATGCTTAATGTCTCAGCATTTGGAGACAGTAATCAAGTCCAAAATTCCAGGCATTCAATCTCTTATTAGCAAAACAATTGCTGAACTTGAATCTGAACTGACTCGTTTAGGAAAGCCGGTGGCAGCGGATGCTGGGGGCAAGTTGTATGCAATCATGGAAATATGTCGCACATTTGATCAAATATTTAAAGAACATCTTGATGGCATACGACCTGGAGGTGATAAAATCTATAATGTCTTTGACAATCAGCTCCCTGCTGCTTTAAAAAGGTTGCAGTTTGATAAGCAGCTTTCAATGGAAAATATAAGGAAACTTATTACGGAAGCTGATGGGTATCAACCTCATCTAATCGCTCCAGAACAAGGATACCGTCGTCTCATTGAATCTTCTCTAACTACTATCAGAGGCCCTGCTGATGCAGCTGTTGATGCGATTCATTCCCTATTGAAGGACCTGGTTCACAAAGCTGTTAGCGAGACTCTGGAGCTGAAGCAATATCCTGGTCTGCGGGTTGAAGTTACTGCTGCAGCTATTGAATCACTAGAGAGAATGAGGGAGGAAAGCAGAAAAGCAACACTACTCCTAGTTGATATGGAGTGTGGCTATCTCACAGTTGATTTTTTCCGGAAGCTTCCTCAAGAAGTTGATAAGGGTGGCAATCCCACACATTCTATTTTCGATAGATATAATGACTCATATCTAAGGCGAATCGGAACTACAATTTTGTCCTATGTCAATATGGTCTGTGCAACTCTGCGGCATGCTATTCCCAAGTCCATTGTCTATTGTCAAGTGCGAGAAGCAAAACGAAGCCTACTTGATCACTTTTTCACTGATCTAGGCAAAATGGATCCAAAGCGGTTGTCAGCTTTGCTGAATGAGGATCCCGAAGTTATGGAACGACGTAGTGCGCTCGCAAAGAGACTTGAATTATACCGGAGTGCACAAGATGAAATAGACGCAGTTGCTTGGTCTAAGTAA 1872 0.4359 MENLISLVNKIQRACTALGDHGEASALPTLWDSLPAIAVVGGQSSGKSSVLESVVGKDFLPRGSGIVTRRPLVLQLHKIEEGSREYAEFLHLPRKRFTDFVAVRKEISDETDRETGRSKQISTVPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQSDSIVQDIENMVRSYIEKPNCIILAISPANQDLATSDAIKISREVDPTGERTIGVLTKIDLMDKGTDAVEILEGRAFKLKFPWIGVVNRSQQDINKNVDMIAARRREREYFASTPEYRHLAHRMGSEHLAKMLSKWLPLAKSQCLMSQHLETVIKSKIPGIQSLISKTIAELESELTRLGKPVAADAGGKLYAIMEICRTFDQIFKEHLDGIRPGGDKIYNVFDNQLPAALKRLQFDKQLSMENIRKLITEADGYQPHLIAPEQGYRRLIESSLTTIRGPADAAVDAIHSLLKDLVHKAVSETLELKQYPGLRVEVTAAAIESLERMREESRKATLLLVDMECGYLTVDFFRKLPQEVDKGGNPTHSIFDRYNDSYLRRIGTTILSYVNMVCATLRHAIPKSIVYCQVREAKRSLLDHFFTDLGKMDPKRLSALLNEDPEVMERRSALAKRLELYRSAQDEIDAVAWSK 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g0467 623 Pfam Dynamin GTPase effector domain 527 619 IPR003130 GO:0003924|GO:0005525
Lal23g0467 623 SMART GED_2 526 619 IPR003130 GO:0003924|GO:0005525
Lal23g0467 623 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 23 292 IPR027417 -
Lal23g0467 623 CDD DLP_1 33 307 IPR001401 GO:0003924|GO:0005525
Lal23g0467 623 PANTHER DYNAMIN 2 622 IPR022812 -
Lal23g0467 623 Gene3D Dynamin, middle domain 345 599 - -
Lal23g0467 623 SMART dynamin_3 1 251 IPR001401 GO:0003924|GO:0005525
Lal23g0467 623 ProSiteProfiles GED domain profile. 531 623 IPR020850 -
Lal23g0467 623 ProSitePatterns Dynamin-type guanine nucleotide-binding (G) domain signature. 60 69 IPR019762 -
Lal23g0467 623 PANTHER DYNAMIN-LIKE PROTEIN 1E 2 622 - -
Lal23g0467 623 PRINTS Dynamin signature 34 52 IPR022812 -
Lal23g0467 623 PRINTS Dynamin signature 59 76 IPR022812 -
Lal23g0467 623 PRINTS Dynamin signature 132 149 IPR022812 -
Lal23g0467 623 PRINTS Dynamin signature 182 200 IPR022812 -
Lal23g0467 623 PRINTS Dynamin signature 201 217 IPR022812 -
Lal23g0467 623 PRINTS Dynamin signature 224 243 IPR022812 -
Lal23g0467 623 Pfam Dynamin family 37 213 IPR045063 -
Lal23g0467 623 Gene3D - 1 322 IPR027417 -
Lal23g0467 623 Pfam Dynamin central region 221 501 IPR000375 -
Lal23g0467 623 ProSiteProfiles Dynamin-type guanine nucleotide-binding (G) domain profile. 31 300 IPR030381 GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g0467 Lal-Chr23 7392506 7399596 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal23g0467 - - gmx:100037461 1117.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal23g0467 23 7392506 7399596 Lal23g0467 23 7392506 7399596 ECH
Lal16g1150 16 7838851 7845707 Lal23g0467 23 7392506 7399596 LSH
Lal15g1454 15 16760816 16767459 Lal23g0467 23 7392506 7399596 LSH