Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g1454 ATGGAGAATTTAATCTCTTTAGTTAACAAAATTCAACGAGCTTGCACCGCCTTAGGTGACCACGGCGAAGCCACCGCTCTTCCTACTCTTTGGGATTCTCTTCCTTCTATCGCCGTCGTCGGTGGCCAGAGTTCTGGAAAATCATCAGTGTTGGAAAGCGTTGTCGGAAAAGATTTCTTACCTCGTGGATCAGTTATTGTGATTGGTTTGAAATTGAAACGTGTTGCAGGGATTGTGACTCGGCGACCACTCGTGTTGCAGCTTCACAAAATTGAAGAGGGGAGTAGAGAGTATGCTGAATTCCTTCACGTTCCGAGGAAAAGGTTCACTGATTTTGCTGCTGTGAGGAATGAGATTCAAGAGGAAACTGATAGGGAGACTGGACGAACCAAACAAATTTCAACAGTCCCAATTCATCTTAGTATATATTCTCCTAATGTTGTTAACTTGACGCTCGTTGATCTTCCCGGGCTGACGAAGATAGCTGTAGAGGGTCAATCGGATAGTATTGTGCAAGACATTGAGAATATGGTTCGCTCCTACATTGAGAAGCCAAACTGTATAATTTTGGCTATTTCACCAGCCAATCAAGATCTTGCAACATCTGATGCAATTAAAATTTCCCGTGAAGTGGACCCTACTGGGGAGAGGACCATTGGCGTTTTGACGAAGATTGATCTTATGGACAAGGGTACTGATGCTGTTGAAATATTGGAAGGGAGAGCTTTTAAGTTAAAGTTTCCTTGGATTGGTGTTGTGAATAGATCACAACAAGACATAAACAAGAATGTTGACATGATTGCTGCCAGGCGTAGAGAACGTGAGTACTTTGCTAGTACCCCTGAATATGGACACCTTGCTCACAGAATGGGTTCTGAGCATCTAGCTAAGATGCTCTCAAAGCATTTGGAGACAGTAATCAAGTCCAAAATTCCGGGAATTCAATCTCTTATTAGCAAAACGATTGCTGAACTTGAATTTGAACTGGCTCGTTTAGGAAAGCCTGCGGCAATTGATGCTGGGGGCAAGTTGTATGCAATCATGGAAATATGTCGCACCTTTGATCAAATATTTAAAGAACATCTTGATGGCATACGGCCTGGAGGTGATAAAATCTATAATGTCTTCGACAATCTGCTCCCTGCTGCTTTAAAAAGGTTGCAGTTTGATAAGCAGCTTTCGATGGAAAATATAAGGAAACTTGTTATGGAAGCTGATGGTTATCAACCTCATCTAATAGCTCCAGAACAAGGATACCGTCGTCTCATTGAATCTTCTCTAACTACTATCAGGGGGCCTGCTGTTGCAGCTGTTGATGCAGTTCATTCCATGTTAAAGGACCTGGTTCACAAAGCTATCGGTGAGACTCTGGAGCTGAGGCAATATCCTGGTCTACGGGTTGAAGTCAGTAATGCAGCTAATGAGTCACTAGAAAGAATGAGGGAGGAAAGCAGAAAAGCAACACTACTGCTAGTTGATATGGAGAGTAGCTATCTCACGGTTGATTTCTTTCGGAGGCTTCCTCAAGATGTTGATAAGGGTGGCAATCCTACACATTCAATTTTCGATAGATATAATGAATCATATCTAAGGCGAATCGGAACTACAATTTTGTCCTATGTCAATATGGTCTGTGCAACTCTGCGGCATTCTATTCCCAAGTCCATCGTCTATTGTCAAGTGCGCGAAGCGAAACGAACCCTACTTGATCATTTTTTCACTGATCTAGGCAAAATGGGTTCCATGCGGTTGTCGTCGTTGTTGAATGAGGATCCTGCACTTATGGAACGACGCACTGCGCTCGCGAAGAGACTCGAGTTATATCGGAGTGCACAAGATGAAATAGATGCAGTTGCTAGGTCTAAGTAG 1869 0.4307 MENLISLVNKIQRACTALGDHGEATALPTLWDSLPSIAVVGGQSSGKSSVLESVVGKDFLPRGSVIVIGLKLKRVAGIVTRRPLVLQLHKIEEGSREYAEFLHVPRKRFTDFAAVRNEIQEETDRETGRTKQISTVPIHLSIYSPNVVNLTLVDLPGLTKIAVEGQSDSIVQDIENMVRSYIEKPNCIILAISPANQDLATSDAIKISREVDPTGERTIGVLTKIDLMDKGTDAVEILEGRAFKLKFPWIGVVNRSQQDINKNVDMIAARRREREYFASTPEYGHLAHRMGSEHLAKMLSKHLETVIKSKIPGIQSLISKTIAELEFELARLGKPAAIDAGGKLYAIMEICRTFDQIFKEHLDGIRPGGDKIYNVFDNLLPAALKRLQFDKQLSMENIRKLVMEADGYQPHLIAPEQGYRRLIESSLTTIRGPAVAAVDAVHSMLKDLVHKAIGETLELRQYPGLRVEVSNAANESLERMREESRKATLLLVDMESSYLTVDFFRRLPQDVDKGGNPTHSIFDRYNESYLRRIGTTILSYVNMVCATLRHSIPKSIVYCQVREAKRTLLDHFFTDLGKMGSMRLSSLLNEDPALMERRTALAKRLELYRSAQDEIDAVARSK 622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g1454 622 CDD DLP_1 33 312 IPR001401 GO:0003924|GO:0005525
Lal15g1454 622 SMART dynamin_3 1 263 IPR001401 GO:0003924|GO:0005525
Lal15g1454 622 PANTHER DYNAMIN-LIKE PROTEIN 1E 2 620 - -
Lal15g1454 622 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 8 320 IPR027417 -
Lal15g1454 622 Pfam Dynamin family 37 225 IPR045063 -
Lal15g1454 622 Gene3D Dynamin, middle domain 338 586 - -
Lal15g1454 622 ProSiteProfiles Dynamin-type guanine nucleotide-binding (G) domain profile. 31 312 IPR030381 GO:0005525
Lal15g1454 622 PANTHER DYNAMIN 2 620 IPR022812 -
Lal15g1454 622 SMART GED_2 525 618 IPR003130 GO:0003924|GO:0005525
Lal15g1454 622 PRINTS Dynamin signature 34 52 IPR022812 -
Lal15g1454 622 PRINTS Dynamin signature 59 76 IPR022812 -
Lal15g1454 622 PRINTS Dynamin signature 144 161 IPR022812 -
Lal15g1454 622 PRINTS Dynamin signature 194 212 IPR022812 -
Lal15g1454 622 PRINTS Dynamin signature 213 229 IPR022812 -
Lal15g1454 622 PRINTS Dynamin signature 236 255 IPR022812 -
Lal15g1454 622 Pfam Dynamin GTPase effector domain 526 618 IPR003130 GO:0003924|GO:0005525
Lal15g1454 622 Pfam Dynamin central region 233 500 IPR000375 -
Lal15g1454 622 ProSiteProfiles GED domain profile. 530 622 IPR020850 -
Lal15g1454 622 Gene3D - 1 321 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g1454 Lal-Chr15 16760816 16767459 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal15g1454 - - gmx:100037461 1077
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal15g1454 15 16760816 16767459 Lal15g1454 15 16760816 16767459 ECH
Lal16g1150 16 7838851 7845707 Lal15g1454 15 16760816 16767459 LSH
Lal15g1454 15 16760816 16767459 Lal23g0467 23 7392506 7399596 LSH