Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g1150 ATGGAGAACTTAATCTCTTTGGTTAACAAAATCCAGAGAGCTTGCACCGCCTTAGGTGACCACGGCGAAGCCACTGCTCTTCCTACACTCTGGGACTCTCTTCCTGCTATCGCCGTCGTCGGTGGCCAGAGCTCTGGAAAGTCTTCAGTGTTGGAAAGCGTTGTCGGCAAAGATTTCTTACCTCGTGGATCAGGGATTGTGACTAGGCGACCTCTTGTGTTGCAGCTTCACAAAATTGAAGAGGGAAGCAGAGAGTATGCTGAATTCCTTCACCTTCCGAGGAAAAGGTTCACTGATTTCGTTGCTGTGAGGAAGGAGATTTCAGATGAAACTGATAGGGAGACAGGACGTACCAAACAGATTTCAACTGTCCCAATTCATCTTAGTATATATTCTCCCAACGATATTCAGGCACAATACCCAGTGACAGTTTGGTTGACCTCTTGGACCTATGCAGTTGTTAACTTGACGCTCGTTGATCTTCCTGGGCTTACAAAGATAGCAGTAGATGGTCAATCGGATAGTATTGTGCAAGACATTGAGAATATGGTTCGGTCCTATATTGAGAAGCCAAACTGTATAATTTTGGCTATTTCACCAGCCAATCAAGATCTTGCAACATCTGACGCAATTAAAATTTCCCGTGAAGTGGACCCCACTGGGGAGAGGACCATTGGCGTTTTGACAAAGATTGATCTTATGGACAAGGGCACTGATGCTGTTGAAAATATGATGTTGAATTCAGTTGATAAGGAGGTGGATGAAATATTGGAAGGAAGAGCTTTTAAGTTAAAGTTTCCGTGGATTGGTGTTGTGAATAGATCACAACAAGACATAAACAAGAATGTTGACATGATTGCTGCCAGGCGTAGAGAACGCGAGTACTTTGCTAGTACCCCTGAATATAGACACCTTGCTCACAGAATGGGCTCTGAGCATCTAGCTAAGATGCTCTCAAAGCATTTGGAGACAGTAATCAAGTCCAAAATTCCAGGCATTCAGTCTCTTATTAGCAAAACAATTGCTGAGCTTGAATCTGAACTGACTCGTTTAGGAAAGCCTGTAGCAGCTGATGCTGGGGGAAAGTTGTATGCGATCATGGAAATATGTCGCACATTTGACCAAATATTTAAGGAACATCTTGATGGCATAATTTTATTTATCCTCCATCCATTGTTTCAAACTAACATCAATAATTTGCAAATCTCCCACAGACGGCCTGGAGGTGATAAAATCTATAATGTCTTTGACAATCAGCTCCCAGCTGCTTTAAAACGGTTGCAGTTTGATAAGCAGCTTTCAATGGAAAATATAAGGAAACTTATTACAGAAGCTGATGGGTATCAACCTCATCTAATAGCTCCAGAACAAGGATACCGTCGTCTCATTGAATCTTCTCTAACTACTATCAGGGCCCCTGCTGATGCAGCTGTTGATGCGGTTCATTCCCTATTAAAGGACCTGATTCACAAATCTGTTAGTGAGACTCTGTTTTCAAATACTCAGAGCTGTAATATTTTCTCCCTTCCATTCACAAATTTCCCAGCTAATAAACATGTTGTTGGTTTGTTTGACTCACAGGAGCTGAAGCAATATCCTGGTCTACGGGTTGAAGTTGGTACTGCAGCTATTGAGTCACTTGAAAAAATGAGGGAGGAAAGCAGAAAAGCAGCTCTGCTGCTAGTTGATATGGAGATTGGCTATCTCACAGTTGATTTCTTCAGAAAGCTCCCTCAAGATGTTGATAAGGGTGGCAATCCTACACATTCAATTTTCGATAGATATAATGATTCATATCTAAGGCGAATCGGAACTACAATTTTGTCCTATGTCAATATGGTCTGTGCAACTCTGCGGCATGCTATTCCCAAGTCCATCGTTTATTGTCAAGTGCGGGAGGCAAAACGAGCCCTACTTGATCACTTTTTCACTGATCTAGGCAAAATGGATCCGAAGCGTTTGTCGGCATTACTGAATGAGGATCCCGCAGTTATGGAACGGCGGACTGCCCTCGCGAAGAGGCTCGAGTTATACAGGAGTGCGCAAGATGAAATAGATGCAGTTGCTTGGTCTAAATAG 2079 0.4281 MENLISLVNKIQRACTALGDHGEATALPTLWDSLPAIAVVGGQSSGKSSVLESVVGKDFLPRGSGIVTRRPLVLQLHKIEEGSREYAEFLHLPRKRFTDFVAVRKEISDETDRETGRTKQISTVPIHLSIYSPNDIQAQYPVTVWLTSWTYAVVNLTLVDLPGLTKIAVDGQSDSIVQDIENMVRSYIEKPNCIILAISPANQDLATSDAIKISREVDPTGERTIGVLTKIDLMDKGTDAVENMMLNSVDKEVDEILEGRAFKLKFPWIGVVNRSQQDINKNVDMIAARRREREYFASTPEYRHLAHRMGSEHLAKMLSKHLETVIKSKIPGIQSLISKTIAELESELTRLGKPVAADAGGKLYAIMEICRTFDQIFKEHLDGIILFILHPLFQTNINNLQISHRRPGGDKIYNVFDNQLPAALKRLQFDKQLSMENIRKLITEADGYQPHLIAPEQGYRRLIESSLTTIRAPADAAVDAVHSLLKDLIHKSVSETLFSNTQSCNIFSLPFTNFPANKHVVGLFDSQELKQYPGLRVEVGTAAIESLEKMREESRKAALLLVDMEIGYLTVDFFRKLPQDVDKGGNPTHSIFDRYNDSYLRRIGTTILSYVNMVCATLRHAIPKSIVYCQVREAKRALLDHFFTDLGKMDPKRLSALLNEDPAVMERRTALAKRLELYRSAQDEIDAVAWSK 692
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g1150 692 Pfam Dynamin family 37 231 IPR045063 -
Lal16g1150 692 ProSiteProfiles GED domain profile. 600 692 IPR020850 -
Lal16g1150 692 SMART dynamin_3 1 282 IPR001401 GO:0003924|GO:0005525
Lal16g1150 692 CDD DLP_1 33 331 IPR001401 GO:0003924|GO:0005525
Lal16g1150 692 PANTHER DYNAMIN 525 691 IPR022812 -
Lal16g1150 692 PANTHER DYNAMIN 2 496 IPR022812 -
Lal16g1150 692 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 8 339 IPR027417 -
Lal16g1150 692 ProSitePatterns Dynamin-type guanine nucleotide-binding (G) domain signature. 60 69 IPR019762 -
Lal16g1150 692 PRINTS Dynamin signature 34 52 IPR022812 -
Lal16g1150 692 PRINTS Dynamin signature 59 76 IPR022812 -
Lal16g1150 692 PRINTS Dynamin signature 150 167 IPR022812 -
Lal16g1150 692 PRINTS Dynamin signature 200 218 IPR022812 -
Lal16g1150 692 PRINTS Dynamin signature 219 235 IPR022812 -
Lal16g1150 692 SMART GED_2 595 688 IPR003130 GO:0003924|GO:0005525
Lal16g1150 692 Gene3D Dynamin, middle domain 362 668 - -
Lal16g1150 692 Pfam Dynamin central region 255 494 IPR000375 -
Lal16g1150 692 Gene3D - 1 340 IPR027417 -
Lal16g1150 692 Pfam Dynamin GTPase effector domain 596 688 IPR003130 GO:0003924|GO:0005525
Lal16g1150 692 ProSiteProfiles Dynamin-type guanine nucleotide-binding (G) domain profile. 31 331 IPR030381 GO:0005525
Lal16g1150 692 PANTHER DYNAMIN-LIKE PROTEIN 1E 525 691 - -
Lal16g1150 692 PANTHER DYNAMIN-LIKE PROTEIN 1E 2 496 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g1150 Lal-Chr16 7838851 7845707 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g1150 - - gmx:100037461 1069.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g1150 16 7838851 7845707 Lal16g1150 16 7838851 7845707 ECH
Lal16g1150 16 7838851 7845707 Lal15g1454 15 16760816 16767459 LSH
Lal16g1150 16 7838851 7845707 Lal23g0467 23 7392506 7399596 LSH