Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g0102 ATGTTCACACACTCTCTTCTCTATATTCTCCATTCACTCCCCACCTTTCTCAATATGGATTCCCTCTCTCTCTTCTGCACCGCCGCTCTCATTGCCGGCGTCCTCTACTGGTTCGTCTGTATTCTCGGCCCCGCCGAACAAAAGGGAATACGCGCCACTGATCTCTCCGGCGGCTCCATCTCCGCCGAGAAAGTCCGTGACAACTACAACAGCTACTGGTCCTTCTTCCGCCGCCCCAAGGAGATCGAAACGGCCGAGAAAGTCCCCGATTTTGTGGACACCTTCTACAACCTCGTAACCGACATCTACGAGTGGGGTTGGGGCCAGTCCTTCCACTTCTCCCCTTCCATCCCTGGCAAATCCCACCGTGACGCCACGCGCCTCCACGAGGAGATGGCCGTCGATCTCATCGAGGCCAAACCTGAACACAAGATCCTGGACGTAGGTTGCGGCGTTGGTGGGCCCATGCGTGCAATCGCTGCTCACTCGCGGGCAAACGTGGTGGGAATCACGATCAACGAGTACCAAGTGAACAGGGCCAAATTGCACAACAAAAAAGCAGGTCTCGACGCGCTCTGTGAGGTGGTGTGTGGAAACTTCCTTGAGATGCCGTTCGCGGATAACAGTTTCGACGGCGCGTACTCAATCGAAGCCACATGTCACGCGCCGAAACTCGAAGAGGTATACGGTGAGATATTTAGGGTTTTGAAGCCGGGTGGTCTTTACGTTTCTTACGAGTGGGTGACGACAGACAAGTACAATTGTGATAACGCGGAACACGTGGCAGTCATTCAGGGAATAGAAAGAGGTAACGCTTTACCAGGACTAAGGAGCTATGATGATATTGCTGAGTCAGCTAAGAAGGTTGGGTTCGAAGTGGTGAAGGAGAAAGATCTGGCTAAACCACCGGCTCAACCATGGTGGAGCCGGTTGAAGATGGGTCGAGTCGCTTACTGGAGGAACCACATTCTGGTCACAATTCTAGCTGCTTTGGGAATTGCACCTAAAGGAACCGTTGATGTTCATGAGATGTTGTTTCACACCGCTGACCATTTGACCCGTGGGGGTGAAACTGGTATTTTCTCTCCGATGCACATGATCCTTTGCAAAAAGCCTTAA 1119 0.5255 MFTHSLLYILHSLPTFLNMDSLSLFCTAALIAGVLYWFVCILGPAEQKGIRATDLSGGSISAEKVRDNYNSYWSFFRRPKEIETAEKVPDFVDTFYNLVTDIYEWGWGQSFHFSPSIPGKSHRDATRLHEEMAVDLIEAKPEHKILDVGCGVGGPMRAIAAHSRANVVGITINEYQVNRAKLHNKKAGLDALCEVVCGNFLEMPFADNSFDGAYSIEATCHAPKLEEVYGEIFRVLKPGGLYVSYEWVTTDKYNCDNAEHVAVIQGIERGNALPGLRSYDDIAESAKKVGFEVVKEKDLAKPPAQPWWSRLKMGRVAYWRNHILVTILAALGIAPKGTVDVHEMLFHTADHLTRGGETGIFSPMHMILCKKP 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g0102 372 PANTHER 24-METHYLENESTEROL C-METHYLTRANSFERASE 3 19 372 - -
Lal21g0102 372 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 95 372 IPR029063 -
Lal21g0102 372 CDD AdoMet_MTases 144 248 - -
Lal21g0102 372 Gene3D Vaccinia Virus protein VP39 62 329 IPR029063 -
Lal21g0102 372 ProSiteProfiles SAM-dependent methyltransferase Erg6/SMT-type domain profile. 95 372 IPR030384 GO:0008168
Lal21g0102 372 PANTHER - 19 372 IPR044625 GO:0008168|GO:0032259
Lal21g0102 372 Pfam Sterol methyltransferase C-terminal 309 372 IPR013705 GO:0006694|GO:0008168
Lal21g0102 372 Pfam Methyltransferase domain 146 243 IPR013216 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g0102 Lal-Chr21 700420 701538 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal21g0102 134 298 Acyl Lipid Metabolism Gene Families AT1G73600 28.916 2.39e-11 63.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g0102 K08242 - gmx:100791154 664.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal21g0102 21 700420 701538 Lal21g0102 21 700420 701538 ECH
Lal17g0050 17 299729 300802 Lal21g0102 21 700420 701538 LSH
Lal21g0102 21 700420 701538 Lal4g0057 4 327986 329056 LSH