Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal20g1281 ATGGATTTTTTGAAAATCAAGAAGTTTATCAAATTTCATAAAGCAGACGGAGAAAATGATTTGGCTGACAAGGCAGTGTCAGAGCCTGAGGAACCAAAGCCTAACACAAGGCAGTGTAAATCAGCAAATGATGATTCTGTCACTGAAGCTGAGGATGATGATGATGATTTTATTACAAATGAGGTGAAAAGGAGGCTGAAAGAATTGAGAAGAAACAGTTTTATGGTATTGATTCCTGAAGAGGATTCATGCCCAGAGGAAGGGGATGATGAAGAGGAAGCAGGAGAGACATGCTCTTATGAATGGAGGGATGTGGAAGCTGAAGGTCAGCAATGGTGGCATGGCTTTGATGCTGTATTTGAAAAGTACTGTGACAGAATGCTTTTCTTTGACAAGATGAGCATGCATCAGCTTAATGAAGTTGGCAAAGGTTCACAGTCACCTTTGATTCCATCTCCAAGATCTGCATCAAAGAGGCTGGCATCTCCCCTTCGCTGTCTTTCCTTGAAATTTTTTGAAGAACCTGATGATGAGATGGAACATCTTCGACAGCCTGAAAATGATCCCTACCAAGATATTGAAACAGCTTATGTTGGTCAAATATGCTTGACTTGGGAGGCACTTCACTGTCAATATTCTCATATGAGTCAAAAGATATATTGGCAACCTGAAAATCCTACCTGTTACAACCACTGTGTGCAGCAGTTTCAACTGTTCCAGGTTCTATTACAAAGGTTTATTGAGAATGAACCTTTTGAGCTGGGTGCCCGAGCTGAAATTTATGCTCGCACAAGGAAAACTTCGCCTAAACTGCTTCAGGTTCCAAATGTGCAAGGTGAATTTTCTGTGCACCATTTACATTCCATTTGGGCTATCATAGATATTGCTGATGTTATTAGTTCAGATCACAAATCAACAGATGATTCAGACATGAGAGTTCTTGCACCTGATCTTATCAAGACAATTGAAAGCTCTATCCTTACATTTCATCTTTTTCTGAAAAGGGACAAGAAAAAGTCAAGTGGTGTTGTCAACCTGTTTGGAAATCATAGTCAGCTTGCAACTCTTCTACACCAGGTTCAGTCTACTCTTGAAAAGAAAATGGTGAAAGTGAAGGAACTGCGTAGAAAAAAGATAGGGTGGCCACAAAAGCATGAGGAGATTCAGCTGTTGCTTGGGCTTATTGACATGAAAATCATTTCAAGGGTTGTGAGAATGACAAAGATGAGTAAAGAACAACTGTTTTGGTGTGAAGAAAAGATGAAAAAACTGGACTTATCAAATAGTAAGTTAGAAAGGGATCCATGCCCCATCCTCTTCCCTTGCTAG 1329 0.4003 MDFLKIKKFIKFHKADGENDLADKAVSEPEEPKPNTRQCKSANDDSVTEAEDDDDDFITNEVKRRLKELRRNSFMVLIPEEDSCPEEGDDEEEAGETCSYEWRDVEAEGQQWWHGFDAVFEKYCDRMLFFDKMSMHQLNEVGKGSQSPLIPSPRSASKRLASPLRCLSLKFFEEPDDEMEHLRQPENDPYQDIETAYVGQICLTWEALHCQYSHMSQKIYWQPENPTCYNHCVQQFQLFQVLLQRFIENEPFELGARAEIYARTRKTSPKLLQVPNVQGEFSVHHLHSIWAIIDIADVISSDHKSTDDSDMRVLAPDLIKTIESSILTFHLFLKRDKKKSSGVVNLFGNHSQLATLLHQVQSTLEKKMVKVKELRRKKIGWPQKHEEIQLLLGLIDMKIISRVVRMTKMSKEQLFWCEEKMKKLDLSNSKLERDPCPILFPC 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal20g1281 442 PANTHER DNA LIGASE (DUF1666)-RELATED 1 442 - -
Lal20g1281 442 MobiDBLite consensus disorder prediction 19 56 - -
Lal20g1281 442 Pfam Protein of unknown function (DUF1666) 191 441 IPR012870 -
Lal20g1281 442 MobiDBLite consensus disorder prediction 19 38 - -
Lal20g1281 442 Coils Coil 357 377 - -
Lal20g1281 442 PANTHER DUF1666 FAMILY PROTEIN (DUF1666) 1 442 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal20g1281 Lal-Chr20 17268828 17272189 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal20g1281 - - gmx:100776804 635.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal20g1281 20 17268828 17272189 Lal1g1178 1 13030935 13037250 LSH
Lal20g1281 20 17268828 17272189 Lal18g0007 18 53425 56048 LSH