Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g0007 ATGGATTTTTTGCAAATCAAGAAGTTCATCAAATCTCACAAAGCAGGTGGAGAAAATAATTTGGCTGACAAGGCAGTGCCAGAGTCTGAGGAACCAAAGGCTAACACTGGTGGTCTTGATCGGCGTAAATCGACAAATGATGATTCTGTCACTGAAGCTGAGGATGATGATGATTTTATTACAAATGAGGTGAAGAGGAGGCTGAAAGAATTGAGAAGAAACAGTTTTATGGTGTTGATTCCCGAAGAGGAATCGTGCCTGGAGGAAGGGGAGGATGAAGACGAAGCAGGAGAGACATTCTCTAAAGAATGGAGAGATGTGGAAGCTGAAGGTCAGCAATGGTGGCGCGGCTTTGACGCTGTATATGAAAATTACTGTGAAAGAATGCTTTTCTTTGATCGGATGAGCACACATCAGCTTGATCAAGTTTGCAAGGGTTCACAGTCTCCTTTGACTCCATCTCCAAGGTCTGCATCGAAGAAGCTGGCATCTCCCCTTCGTTGTCTTTCCTTGAAAAAAATTGAAGAACCTGATGATGAGATGGACCATCTTCAACAGCCGGAAAATGACCCCTACCAAGATATTGAAACAGCATATGTTGGTCAAATATGCTTGACTTGGGAGGCACTTCATTGTCAATATTCTCATATGAGTCAGAAGATATCTTGGCAACCTGAAAATCCTACCTGTTACAACCACAGTGCCCAGCAGTTTCAACAATTCCAGGTTCTATTGCAAAGGTTTATTGAGAATGAACCTTTTGAGCAGGGCGCCCTAGCTGAAATTTATGCTCGCACAAGGAAAACTTTCCCTAAACTGCTTCAGGTTCCTAATATACAAGGTTCAGATCCTGAATCAACTGATGATTCAGATATGAGAGTTCTTGCTCCTGATCTTATCAAGATAATTGAAATCTCCATCCTTACATTTCACCTTTTCCTGAAAAGGGACAAGAAAAAGTCAAGTGTACACATCAACCTGTTTGGAAATCATAGTCAGCTTGCAACTCCTCTGCACCAGGTTCAGTCTACCCTCGAAAAGAAAGTGGCGAAAATGAAGGAACTGCGTAGAAAAAAGAAAGGGTGGAAAAAGAATTGTTGGCCTGAAAAGCATGAAGAGATTCAGCTGTTGCTTGGGCTTATTGACATCAAAATCCTTTCAAGGGTTTTGAGAATGAGAAAGATGAGTAGAGAACAAGTGTTTTGGTGTGAAGAAAAGTTGAAAAAATTGGAAGTATCAAATAGTAAGTTAGAGAGAGATCCATGTCCCTGTCTCTTCCCTTGCTAG 1287 0.4149 MDFLQIKKFIKSHKAGGENNLADKAVPESEEPKANTGGLDRRKSTNDDSVTEAEDDDDFITNEVKRRLKELRRNSFMVLIPEEESCLEEGEDEDEAGETFSKEWRDVEAEGQQWWRGFDAVYENYCERMLFFDRMSTHQLDQVCKGSQSPLTPSPRSASKKLASPLRCLSLKKIEEPDDEMDHLQQPENDPYQDIETAYVGQICLTWEALHCQYSHMSQKISWQPENPTCYNHSAQQFQQFQVLLQRFIENEPFEQGALAEIYARTRKTFPKLLQVPNIQGSDPESTDDSDMRVLAPDLIKIIEISILTFHLFLKRDKKKSSVHINLFGNHSQLATPLHQVQSTLEKKVAKMKELRRKKKGWKKNCWPEKHEEIQLLLGLIDIKILSRVLRMRKMSREQVFWCEEKLKKLEVSNSKLERDPCPCLFPC 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g0007 428 MobiDBLite consensus disorder prediction 17 56 - -
Lal18g0007 428 PANTHER DUF1666 FAMILY PROTEIN (DUF1666) 1 428 - -
Lal18g0007 428 Coils Coil 338 365 - -
Lal18g0007 428 MobiDBLite consensus disorder prediction 144 159 - -
Lal18g0007 428 MobiDBLite consensus disorder prediction 144 163 - -
Lal18g0007 428 MobiDBLite consensus disorder prediction 17 49 - -
Lal18g0007 428 PANTHER DNA LIGASE (DUF1666)-RELATED 1 428 - -
Lal18g0007 428 Pfam Protein of unknown function (DUF1666) 193 427 IPR012870 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g0007 Lal-Chr18 53425 56048 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g0007 - - ahf:112795511 661.759
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal20g1281 20 17268828 17272189 Lal18g0007 18 53425 56048 LSH
Lal1g1178 1 13030935 13037250 Lal18g0007 18 53425 56048 LSH