Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g1178 ATGGATTTTTTGAAAATCAAGAAGTTCATCAAATCTCACACAGCAGATGGAGAAAATGGTTTGGCTGACAAGGCTGTGCCAGAGCCTGAGGAACCAAAGCCTAACAAAAATGATGATTCTGTCACTGAAGCTGAGGATGATGATGATTTTATTACTAATGAGGTGAAGAGGAGGTTGAAAGAATTGAGAAGGAACAGTTTTATGGTTTTGATTCCGGAAGAGGATTCATGCCCGGAGGAAGGGGATGATAAAGAAGAAGCAGGAGAGACAGGCTATAATGAATGGAGGGATGTGGAAGCTGAAGGTCAGCAATGGTGGCGTGGCTTTGATGCTGTATTTGAAAAGTACTGTGAAAGAATGCTTTTCTTTGATCGGATGAGCATGCAGCAACTTAATGAAGTTGGCAAAGGTACACAGCCTCCTTTGACTCCATCTCCAAGATCTGCATCAAAGAAGCTGGCTTCTCCCTTCCGTTGTCTTTCCTTGAAAAAAATTGAAGAACCTGACGATGAGATGGAAAATCTTCAACAGCCTGAAAATGATCCCTACCAAGATATTGAAACAGCTTATGTTGGTCATATATGCTTGACTTGGGAGGCACTTCACTGTCAATATTCTCACATGAGTCAGAAGATATCTTGGCAACCCGAAAATCCTACCTGTTACAATCACAGCACACAGCAGTTTCAACAGTTCCAGGTTCTATTGCAGAGATTTATAGAGAATGAACCTTTTGAGCAAGGCGGTCGAGCTGAAATTTATGCTCGCACAAGGAAAACTTTGCCTAAACTGCTTCAGGTTCCTAATATACAAGGTTCAGATCCTCAATCAACAGATGAATCAGAGATGGGAGTTCTTGCTCCTGATCTTATCATGGCAATTGAAAGCTCTATCCTCACATTTTACCTTTTCCTGAAAAGGGACAAGAAAAAGTCAAGCAGTACTCTCAACCTGTTTGGAAATCAGAGTCAGCTTTCAACTCCTCTACACCAGGTTCAGTCTACCCTTGAAAAGAAAGTGGTGAAAGTGAAGGAATTGCGTAGGAAAAAGAAAGGGTGGAAAATGAATAGTTGGCCGCAAAAGCATGAGGAGATTCAGCTGTTGCTTGGGGTTATTGACATGAAAATCCTTTCAAGGGTTATGAGAATGAGAAAGATTAGCAGAGAACAACTGTTTTGGTGTGAAGAAAAGATGAAAAAGGTGGATGTATCAAATAGTAAGTTAGAGAGGGATCCATGTCCCATCCTCTTCCCTTGCTAG 1260 0.4143 MDFLKIKKFIKSHTADGENGLADKAVPEPEEPKPNKNDDSVTEAEDDDDFITNEVKRRLKELRRNSFMVLIPEEDSCPEEGDDKEEAGETGYNEWRDVEAEGQQWWRGFDAVFEKYCERMLFFDRMSMQQLNEVGKGTQPPLTPSPRSASKKLASPFRCLSLKKIEEPDDEMENLQQPENDPYQDIETAYVGHICLTWEALHCQYSHMSQKISWQPENPTCYNHSTQQFQQFQVLLQRFIENEPFEQGGRAEIYARTRKTLPKLLQVPNIQGSDPQSTDESEMGVLAPDLIMAIESSILTFYLFLKRDKKKSSSTLNLFGNQSQLSTPLHQVQSTLEKKVVKVKELRRKKKGWKMNSWPQKHEEIQLLLGVIDMKILSRVMRMRKISREQLFWCEEKMKKVDVSNSKLERDPCPILFPC 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g1178 419 Coils Coil 329 349 - -
Lal1g1178 419 MobiDBLite consensus disorder prediction 16 49 - -
Lal1g1178 419 MobiDBLite consensus disorder prediction 73 92 - -
Lal1g1178 419 PANTHER DNA LIGASE (DUF1666)-RELATED 1 419 - -
Lal1g1178 419 MobiDBLite consensus disorder prediction 16 40 - -
Lal1g1178 419 Pfam Protein of unknown function (DUF1666) 184 418 IPR012870 -
Lal1g1178 419 PANTHER DUF1666 FAMILY PROTEIN (DUF1666) 1 419 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g1178 Lal-Chr1 13030935 13037250 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g1178 - - ahf:112795511 667.537
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g1178 1 13030935 13037250 Lal1g1178 1 13030935 13037250 ECH
Lal20g1281 20 17268828 17272189 Lal1g1178 1 13030935 13037250 LSH
Lal1g1178 1 13030935 13037250 Lal18g0007 18 53425 56048 LSH