Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal20g1241 ATGTGGTCAAAAGGATATAGCATAATGTTCTGCAAGAAAAGTTCTGAAAACGACGTCGTATCAGGTTGTGGATCAGTGCCAGTGTACTTGAATGTTTATGATCTAACACCCATCAATGGTTGTGCTTATTGGGCTGGCCTTGGAATTCATCATTCTGGTGTTCAAGTGCATGGTGTCGAATATGCATTTGGGGCACATGAGGACCTATCATCAGGGATATTTGAAGGGGCACCAAAGAAATCTGAAATATTCAGGTTCAGAAAATCTATATTAATTGGTACAACAAATATGGGATGTGATGGAGTGAAAGGTTTGATGAAAGAACTTGGTGCTGAGTATAGAGGAAATGCTTATCATTTGATCACAAAAAATTGCAACCATTTTTGCAATGATGTTTGTCTTAAGCTCACCGGAAATCATATTCCTAGTTGGGTCAATCGTCTTGCCAGAATCGGGTTAATGGTGAATTGTATTCTTCCTGTGACATTGAAATCAGCTAAAGTTAGGGATCATACAACAAAAAACAAAGAAATACAATTTGAAGGAAAGAAAGAAGCATTAACTAGTGACTCCAACAATGTTACTCCTTCTTCTTCTTCTAGCTTAACATTGTTCTTTACTCCTTCCCCTGTATCTACATCCGAAAATGTATATAGGGGAAGAAGTAGAATCACACGTCACATTTCTCTACCTTTAATTATTGAGTATTCATCTTGA 717 0.3724 MWSKGYSIMFCKKSSENDVVSGCGSVPVYLNVYDLTPINGCAYWAGLGIHHSGVQVHGVEYAFGAHEDLSSGIFEGAPKKSEIFRFRKSILIGTTNMGCDGVKGLMKELGAEYRGNAYHLITKNCNHFCNDVCLKLTGNHIPSWVNRLARIGLMVNCILPVTLKSAKVRDHTTKNKEIQFEGKKEALTSDSNNVTPSSSSSLTLFFTPSPVSTSENVYRGRSRITRHISLPLIIEYSS 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal20g1241 238 PANTHER DESUMOYLATING ISOPEPTIDASE 17 237 IPR008580 GO:0008233
Lal20g1241 238 SMART DUF862_2a 26 164 IPR008580 GO:0008233
Lal20g1241 238 Gene3D PPPDE domains 23 183 IPR042266 -
Lal20g1241 238 PANTHER F23A5.4 PROTEIN 17 237 - -
Lal20g1241 238 Pfam PPPDE putative peptidase domain 27 160 IPR008580 GO:0008233
Lal20g1241 238 ProSiteProfiles PPPDE domain profile. 26 163 IPR008580 GO:0008233
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal20g1241 Lal-Chr20 16939889 16942680 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal20g1241 K22763 - gmx:100817929 270.011
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal20g1241 20 16939889 16942680 Lal1g1229 1 13565293 13567935 LSH
Lal20g1241 20 16939889 16942680 Lal18g0048 18 346655 349464 LSH