Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lal1g1229 | ATGCTGTGCAGAAAAAGCTCTCGAAACGGCGTCGTGGGTGGTTCAGGATCGGTGCCGGTGTACCTTAATGTTTACGATCTCACAACCATCAATGGTTATGCTTATTGGTTCGGCCTTGGAGTTTACCATTCTGGGGTTCAAGTACACGATGTTGAGTATGCATTCGGGGCGCACGAGTACCCCTCGACCGGAATATTTGAAGGGGAACCAAAGAGATGCCATGGGTTCAGATTCAGGAAGACCATAGCGATTGGGAAGACAGATATGGAACATGGTGAAGTGAAGGGTTTGATGGAAGAACTTGCCAATGAGTATAAAGGGAATGCTTATAATTTGATCACAAAAAACTGTAACCATTTCTGCAATGCTGCTTGTCTTAAGCTCACTGGAAATCATATTCCTAACTGGGTTAATCGCCTCGCCCGAATCGGGTTTTTGTTCAATTGTGTTCTTCCAGTGACATTGAACTCAACTAAAGTTATACATCACAGAATAGAAGACAAACAAATGCAAAGTGATGGAGACAAACAAGTATTAACTAATGACTCGAACAATGTCACTACTTCAGATTCAACTTCTTCCCCGGCAGCGTCTTCCTCGGGCGCGCTACGCCGAGGAAGAAGTAGAACTCGACGTCCTCTTCCTCCACCTTCACCTTTGAATATTGAGTCTTCATCTTGA | 681 | 0.4449 | MLCRKSSRNGVVGGSGSVPVYLNVYDLTTINGYAYWFGLGVYHSGVQVHDVEYAFGAHEYPSTGIFEGEPKRCHGFRFRKTIAIGKTDMEHGEVKGLMEELANEYKGNAYNLITKNCNHFCNAACLKLTGNHIPNWVNRLARIGFLFNCVLPVTLNSTKVIHHRIEDKQMQSDGDKQVLTNDSNNVTTSDSTSSPAASSSGALRRGRSRTRRPLPPPSPLNIESSS | 226 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lal1g1229 | 226 | MobiDBLite | consensus disorder prediction | 166 | 226 | - | - | |
| Lal1g1229 | 226 | Gene3D | PPPDE domains | 15 | 173 | IPR042266 | - | |
| Lal1g1229 | 226 | ProSiteProfiles | PPPDE domain profile. | 18 | 155 | IPR008580 | GO:0008233 | |
| Lal1g1229 | 226 | PANTHER | DESUMOYLATING ISOPEPTIDASE | 11 | 226 | IPR008580 | GO:0008233 | |
| Lal1g1229 | 226 | PANTHER | F23A5.4 PROTEIN | 11 | 226 | - | - | |
| Lal1g1229 | 226 | SMART | DUF862_2a | 18 | 156 | IPR008580 | GO:0008233 | |
| Lal1g1229 | 226 | MobiDBLite | consensus disorder prediction | 174 | 204 | - | - | |
| Lal1g1229 | 226 | Pfam | PPPDE putative peptidase domain | 19 | 151 | IPR008580 | GO:0008233 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lal1g1229 | Lal-Chr1 | 13565293 | 13567935 | Dispersed/Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lal1g1229 | K22763 | - | gmx:100796813 | 290.041 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Lal1g1229 | 1 | 13565293 | 13567935 | Lal1g1229 | 1 | 13565293 | 13567935 | ECH | |
| Lal20g1241 | 20 | 16939889 | 16942680 | Lal1g1229 | 1 | 13565293 | 13567935 | LSH | |
| Lal1g1229 | 1 | 13565293 | 13567935 | Lal18g0048 | 18 | 346655 | 349464 | LSH |