Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal20g0189 ATGTCGGTAAAGGAGTGCGACCACCACAAAGGCAAGAAGAAGAAAATCTTCCGCCGCATATTCTGGGGAATAATATTCTTCCTCTTCATCATCCTCCTCACAATCCTTATTGTATGGGCCATCCTCCGTCCAACTAAACCCACCTTCATCCTCCAAGATGTAACCGTTTACGCCTTCAACGCCACCGTACCAAACCTCCTCACCTCAAATTTTCAGGTCACCCTCTCTTCCCGAAACCCTAACGACAAAATTGGTGTCTACTACGACCGACTTGACACCTACATCAGCTACCGGAGCCAGCAAATTACGCTCCGAACCGCCATTCCTCCCTCCTATCAAGGCCACAAGGAGGTTGACGTTTGGTCTCCGTTTGTTTACGGAACTAATGTCCCTGTTGCTCCTTACAACTTTGTAGGGCTTAGCCAAGACCAAAGTAACGGTAACGTCCTTGTCGACGTTAAAATTGACGGTAGGGTTCGTTGGAAAGTTGGTTCATTCATTTCTGGACGTTACCACATCTATGTCCATTGCCCTGCTTACATCACGTTCGGTGCACAAAGTAACGGAATATCTGTTGGGAATAACGCCGTGAAGTACCAATTGGTCCAGCGATGCACTGTTAGTGTTTGA 630 0.4746 MSVKECDHHKGKKKKIFRRIFWGIIFFLFIILLTILIVWAILRPTKPTFILQDVTVYAFNATVPNLLTSNFQVTLSSRNPNDKIGVYYDRLDTYISYRSQQITLRTAIPPSYQGHKEVDVWSPFVYGTNVPVAPYNFVGLSQDQSNGNVLVDVKIDGRVRWKVGSFISGRYHIYVHCPAYITFGAQSNGISVGNNAVKYQLVQRCTVSV 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal20g0189 209 Pfam Late embryogenesis abundant protein 74 176 IPR004864 -
Lal20g0189 209 PANTHER OS05G0367900 PROTEIN 4 209 IPR044839 GO:0098542
Lal20g0189 209 PANTHER LATE EMBRYOGENESIS ABUNDANT HYDROXYPROLINE-RICH GLYCOPROTEIN 4 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal20g0189 Lal-Chr20 1316556 1317185 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal20g0189 14 177 EF-hand Containing Proteins AT5G21130 23.214 4.08e-06 44.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal20g0189 - - gmx:100795832 331.643
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal20g0189 20 1316556 1317185 Lal20g0189 20 1316556 1317185 ECH
Lal1g1734 1 19775977 19776606 Lal20g0189 20 1316556 1317185 LSH
Lal20g0189 20 1316556 1317185 Lal13g1328 13 12230974 12231606 PCT
Lal13g1328 13 12230974 12231606 Lal20g0189 20 1316556 1317185 PCT