Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g1328 ATGTCAGTTAAGGAGTGTGACCACCACAAGGGGAAGAAGCGAAAGGTTTTCAGGAAAATATTTTGTGGGATTGTGGTCTTTCTCTTCATTGTACTAGTCACAATCCTTCTCATATGGGCAATTCTACAGCCTACAAAACCATCCTTCATCCTCCAAGATGTCACTGTTTACGCCTTCAACACCACCGTCCCTAACCTCTTAACCTCAAATTTCCAAGTCACCCTCACTTCCCGCAACCCTAACGACCACATCGGCGTCTACTACGACCGCCTCGACACCTACGTTAACTACCGGAACCAGCAAATCACTCTTCGCACAGCCATCCCTCCGTCGTACCAGGGCCACAAGGAGGTTGATGTTTGGTCACCGTTTGTATACGGCACCAATGTCCCCGTCGCACCCTTCAACTTCGTGAGTCTTGGCCAAGACCAAGGTGATGGTAATATTCTTATTACTATCAAAATTGATGGCAGGGTCCGTTGGAAAGTTGGTGCATTCATCACTGGGCATTACCATCTCTATGTTCGTTGCCCAGCGTTTATCTCATTCGGTGGTTCCCGGAGCAACGGTGTTGTTGTTGGTGATAATGTTATTAAGTATCAGTTGGTGCAGTCATGCTCCGTTAGCGTATAA 633 0.4739 MSVKECDHHKGKKRKVFRKIFCGIVVFLFIVLVTILLIWAILQPTKPSFILQDVTVYAFNTTVPNLLTSNFQVTLTSRNPNDHIGVYYDRLDTYVNYRNQQITLRTAIPPSYQGHKEVDVWSPFVYGTNVPVAPFNFVSLGQDQGDGNILITIKIDGRVRWKVGAFITGHYHLYVRCPAFISFGGSRSNGVVVGDNVIKYQLVQSCSVSV 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g1328 210 PANTHER LATE EMBRYOGENESIS ABUNDANT HYDROXYPROLINE-RICH GLYCOPROTEIN 4 210 - -
Lal13g1328 210 Pfam Late embryogenesis abundant protein 74 177 IPR004864 -
Lal13g1328 210 PANTHER OS05G0367900 PROTEIN 4 210 IPR044839 GO:0098542
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g1328 Lal-Chr13 12230974 12231606 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal13g1328 18 177 EF-hand Containing Proteins AT5G21130 21.951 4.76e-06 44.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal13g1328 - - lang:109336699 393.275
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal13g1328 13 12230974 12231606 Lal13g1328 13 12230974 12231606 ECH
Lal1g1734 1 19775977 19776606 Lal13g1328 13 12230974 12231606 PCT
Lal20g0189 20 1316556 1317185 Lal13g1328 13 12230974 12231606 PCT
Lal13g1328 13 12230974 12231606 Lal1g1734 1 19775977 19776606 PCT
Lal13g1328 13 12230974 12231606 Lal20g0189 20 1316556 1317185 PCT