Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g1734 ATGTCGATAAAGGAGTGTAATCACCACAAGGACAAGAAGAAGAAAATATTTCGGCGCGTATTCTGGGGAATAGTGATCTTCCTTTTCATCATTCTCCTCATCATCCTCGTAGTTTGGGCCACCCTGCGTCCCACAAAACCAACCTTCATTCTCCAGGATGTCACAGTTTACGCATTTAACGCGACCATACCGAACTTCCTCACCTCGAATTTTCAAGTTACACTCTCCTCCCGAAACCCTAACGATAAGATCGGCGTATACTACGACCGCCTCGACACCTATGTCGTTTACCGGAGCCAGCAAATTACTCTTCGGACCGCCATCCCTCCGTCCTATCAAGGCCACAAAGAGGTTGACATTTGGTCGCCGATTGTTTACGGAACTAACGTCCCTGTTGCTCCTTATAACTTTGTTGGGCTTAGTCAAGACCAAAGTAACGGTAACGTCCTTGTTGTCGTTAATATTGACGGTAGGGTTCGTTGGAAGGTTGGTTCATTCATTTCTGGACGTTACCATATTTATATACGTTGCCCTGCTTATATCAACTTTGGTGCCCAAAGTAATGGAAATTTTGTAGGGAATAACGCCGTTAAGTATCAGTTGGTCCAACAATGCACCGTTAGCGTTTGA 630 0.4524 MSIKECNHHKDKKKKIFRRVFWGIVIFLFIILLIILVVWATLRPTKPTFILQDVTVYAFNATIPNFLTSNFQVTLSSRNPNDKIGVYYDRLDTYVVYRSQQITLRTAIPPSYQGHKEVDIWSPIVYGTNVPVAPYNFVGLSQDQSNGNVLVVVNIDGRVRWKVGSFISGRYHIYIRCPAYINFGAQSNGNFVGNNAVKYQLVQQCTVSV 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g1734 209 Pfam Late embryogenesis abundant protein 74 175 IPR004864 -
Lal1g1734 209 PANTHER OS05G0367900 PROTEIN 4 209 IPR044839 GO:0098542
Lal1g1734 209 PANTHER LATE EMBRYOGENESIS ABUNDANT HYDROXYPROLINE-RICH GLYCOPROTEIN 4 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g1734 Lal-Chr1 19775977 19776606 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g1734 14 177 EF-hand Containing Proteins AT5G21130 22.024 7.28e-06 43.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g1734 - - gmx:100795832 326.635
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g1734 1 19775977 19776606 Lal1g1734 1 19775977 19776606 ECH
Lal1g1734 1 19775977 19776606 Lal20g0189 20 1316556 1317185 LSH
Lal1g1734 1 19775977 19776606 Lal13g1328 13 12230974 12231606 PCT
Lal13g1328 13 12230974 12231606 Lal1g1734 1 19775977 19776606 PCT