Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal20g0118 ATGTCTGGCACTGTGACCATAGTTGATAATTTGGATGGAGGAACACTTTCTTCTGCAGAGAGAACACAATCTCTTGATGCCAATTCTAATATAGACCATTTATCTATATTGACAAATGGTGAAGCTGGTCACTCCTCTGAAATTGTCGGCTTTAGGGCCGGAGAACTCTTACTTTCTAATGGAGAGTCATATTCCGGGTCCCTTCTTGGCGATATTCCTGAAGGCCAGGGTACATATGTGTGGTCTGATGGCGGTGTATATGAAGGTGAGTGGAGACGAGGGGTGAGAAATGGGATCGGAAAAATGCGATGGCATTCTGGAGCAATGTATGAGGGTGAATTTTCTGGTGGTTATATCCATGGTACGGGAACGTATATTGGTTCTGATAAAACCTATAAAGGTCGGTGGCGATTGAATCTTAAACATGGTCTTGGTTATCAAGTTTATCGTAATGGTGATATCTTTGAAGGTTCTTGGATACAAGGAACACCAGAGGGGCCTGGAAAGTATACCTGGGACAATGGGAATGTATACTTGGGGAATATGAGAGGTGGGACAAAGTCGGGAAAAGGAACCCTCACATGGATAACGGGGGACTCGTTTGAAGGAAGCTGGTTAAATGGCATGATGCATGGGTTAGGAGTGTATACTTGGAGTGACGGAGGCTGCTACGTTGGGACTTGGACGGCTGGTCTAAAAGACGGAAAAGGAACCTTTTATCCACGAGGTAACCGCCTTCCAACTGTGCAAGAAATTTACCTCAGTGCCTTGCGTAAAAGGGGGCTATTGCCAGACTTGAGAAAGCAGAAACAGGTGGGAGATGTCATAATTGGTCAGAGCCAAGGACCTCCTCAGTCTAGTAGAAGAAATGTTTCTCTTGAAAGGCGTTGGAGTCTCGAGGTATCTATTGAGAAAGTGATTGGGCATGATTCAGCATTCGGTTTAACAGAACCTGGACCTGAAAGTGGAGATAAAGAGGTTAATTCAAAGATCCCAATTTTGGAACGAGAGTACATGCAAGGTGTATTAATAAGTGAGCTAGTGTTAGATAATATGTTTTCATCAACTTCTAGAACGGCAAGACGACTTCAAAGAAAACTCAAAGAGATAAAAAGACCTGGAGAAGCAATCATTAAAGGTCATCGGAGTTATGATCTGATGCTCAGTTTGCAGCTTGGAATAAGGTATACTGTGGGAAAGATTACACCTGTACAGGGACGAGAAGTTCGAACATCAGATTTTGGTGCAAAAGCAAGCTTTTGGATGGATTTTCCCAAAGAAGGATCTCAATTGACACCTACTCATCAATCAGAGGATTTTAAATGGAAAGACTACTGTCCGATGGTGTTCAGAAATTTAAGAGATATGTTCAAGATTGATGCTGCCGACTACATGATGTCCATTTGTGGAAATGATACTCTAAGGGAACTGTCTTCCCCAGGGAAAAGTGGCAGTGTCTTTTTCCTGTCTCAGGATGATCGTTTCATGATCAAGACACTGAGAAGATCTGAAGTCAAGGTTCTTCTAAGAATGCTTCCAGACTATCATCATCATGTGAAGTCTTATGAAAATACACTCATCACAAAGTTTTTTGGCCTGCACAGGATTAAACCTTCAAGTGGTCAAAAGTTTCGCTTTGTTGTAATGGGAAATATGTTCTGCACAGAATTAAGGATCCATCGCAGATTTGATTTAAAAGGTTCGTCCCTTGGACGGTCATCAGACAAGATAGAAATTGATGAGAATACCACTCTTAAAGATTTGGATCTAAACTACAGCTTCTACTTGGAACCATCTTGGCGGGAGTCTTTATTAAAGCAGATTGAAATAGACAGCAAGTTTTTGGAAGCACAGCACATTATGGATTACAGCCTTCTTCTAGGTGTTCATTATCGAGCTCCCAAGCATCTGCGTCCTCTCACGTCATACAACCGTAGTACAAATCGGGATGGATTACCAATTCTTGCAGAGGAAGACCCTCTGGAGGATGAAGTACTGAACTATCCACAAGGCCTTGTTCTGGTTCCACGAGGAGATGATGATAATAGTGTTGTTCTCGGGCCTCATGTGAGGGGTAGTCGGTTGCGAGCTTCATCTGCTGGCGATGAAGAGGTCGATCTACTTCTACCTGGTACAGCAAGACTCCAAATTCAGCTCGGTGTGAACATGCCATCGAGGGCAGAGCTGATACCGGGGAAACAGGAAAAGGAAATGTTCCATGAGGTATACGACGTCGTTCTGTACCTAGGTATCATTGACATATTGCAAGACTACAATATGACCAAGAGGATTGAGCATGCATATAAATCTCTTCAGTTTGATTCATTGTCTATCTCAGTTGTAGACCCTACATTCTACTCACATCGCTTCCTGGAATTTATTCAGAAAGTGTTTCCACCAAATGCAACTTCAGGTTAA 2418 0.4276 MSGTVTIVDNLDGGTLSSAERTQSLDANSNIDHLSILTNGEAGHSSEIVGFRAGELLLSNGESYSGSLLGDIPEGQGTYVWSDGGVYEGEWRRGVRNGIGKMRWHSGAMYEGEFSGGYIHGTGTYIGSDKTYKGRWRLNLKHGLGYQVYRNGDIFEGSWIQGTPEGPGKYTWDNGNVYLGNMRGGTKSGKGTLTWITGDSFEGSWLNGMMHGLGVYTWSDGGCYVGTWTAGLKDGKGTFYPRGNRLPTVQEIYLSALRKRGLLPDLRKQKQVGDVIIGQSQGPPQSSRRNVSLERRWSLEVSIEKVIGHDSAFGLTEPGPESGDKEVNSKIPILEREYMQGVLISELVLDNMFSSTSRTARRLQRKLKEIKRPGEAIIKGHRSYDLMLSLQLGIRYTVGKITPVQGREVRTSDFGAKASFWMDFPKEGSQLTPTHQSEDFKWKDYCPMVFRNLRDMFKIDAADYMMSICGNDTLRELSSPGKSGSVFFLSQDDRFMIKTLRRSEVKVLLRMLPDYHHHVKSYENTLITKFFGLHRIKPSSGQKFRFVVMGNMFCTELRIHRRFDLKGSSLGRSSDKIEIDENTTLKDLDLNYSFYLEPSWRESLLKQIEIDSKFLEAQHIMDYSLLLGVHYRAPKHLRPLTSYNRSTNRDGLPILAEEDPLEDEVLNYPQGLVLVPRGDDDNSVVLGPHVRGSRLRASSAGDEEVDLLLPGTARLQIQLGVNMPSRAELIPGKQEKEMFHEVYDVVLYLGIIDILQDYNMTKRIEHAYKSLQFDSLSISVVDPTFYSHRFLEFIQKVFPPNATSG 805
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal20g0118 805 PIRSF PIP5K_plant 4 802 IPR017163 GO:0005524|GO:0016308
Lal20g0118 805 Gene3D - 53 92 - -
Lal20g0118 805 Gene3D - 207 249 - -
Lal20g0118 805 Gene3D - 157 206 - -
Lal20g0118 805 Gene3D - 93 140 - -
Lal20g0118 805 ProSiteProfiles Phosphatidylinositol phosphate kinase (PIPK) domain profile. 380 798 IPR002498 GO:0016307|GO:0046488
Lal20g0118 805 CDD PIPKc_AtPIP5K_like 383 797 - -
Lal20g0118 805 SUPERFAMILY SAICAR synthase-like 379 798 - -
Lal20g0118 805 PANTHER PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE 285 801 IPR023610 -
Lal20g0118 805 PANTHER PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE 19 275 IPR023610 -
Lal20g0118 805 PANTHER PHOSPHATIDYLINOSITOL 4-PHOSPHATE 5-KINASE 285 801 - -
Lal20g0118 805 PANTHER PHOSPHATIDYLINOSITOL 4-PHOSPHATE 5-KINASE 19 275 - -
Lal20g0118 805 Pfam MORN repeat 155 177 IPR003409 -
Lal20g0118 805 Pfam MORN repeat 178 199 IPR003409 -
Lal20g0118 805 Pfam MORN repeat 201 222 IPR003409 -
Lal20g0118 805 Pfam MORN repeat 110 129 IPR003409 -
Lal20g0118 805 Pfam MORN repeat 87 108 IPR003409 -
Lal20g0118 805 Pfam MORN repeat 64 86 IPR003409 -
Lal20g0118 805 Pfam MORN repeat 132 153 IPR003409 -
Lal20g0118 805 Pfam MORN repeat 224 245 IPR003409 -
Lal20g0118 805 SMART morn 199 220 IPR003409 -
Lal20g0118 805 SMART morn 130 151 IPR003409 -
Lal20g0118 805 SMART morn 62 83 IPR003409 -
Lal20g0118 805 SMART morn 108 129 IPR003409 -
Lal20g0118 805 SMART morn 176 197 IPR003409 -
Lal20g0118 805 SMART morn 85 106 IPR003409 -
Lal20g0118 805 SMART morn 222 243 IPR003409 -
Lal20g0118 805 SMART morn 153 174 IPR003409 -
Lal20g0118 805 Gene3D - 552 798 - -
Lal20g0118 805 Gene3D Phosphatidylinositol Phosphate Kinase II Beta 369 551 IPR027484 -
Lal20g0118 805 Pfam Phosphatidylinositol-4-phosphate 5-Kinase 469 796 IPR002498 GO:0016307|GO:0046488
Lal20g0118 805 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 59 185 - -
Lal20g0118 805 SMART PIPK_2 410 799 IPR002498 GO:0016307|GO:0046488
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal20g0118 Lal-Chr20 769037 775784 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal20g0118 14 804 Acyl Lipid Metabolism Gene Families AT3G09920 72.963 0.0 1209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal20g0118 K00889 - gmx:100800418 1360.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal20g0118 20 769037 775784 Lal20g0118 20 769037 775784 ECH
Lal1g1795 1 20281685 20288975 Lal20g0118 20 769037 775784 LSH
Lal20g0118 20 769037 775784 Lal13g1536 13 15144604 15148719 PCT
Lal13g1536 13 15144604 15148719 Lal20g0118 20 769037 775784 PCT