Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g1795 ATGTCGGGCACTGTGGCCGTAGTTGATAATTTGGATGGAGGAGCACTTTTTTGTGCAGAGAGAACACAATCTCTTGATGCCAATTCTAGCATAGACCATTTATCTATATTGACAAATGGTGAAGCTGGCCATTCCTCTGAAATTGTTGGATTTCGGGTCGGGGAACTCTTGCTTTCTAATGGAGAGTCGTATTCTGGATCCCTTCTTGGTGATATTCCGGAGGGCCAGGGTACGTATGTGTGGTCTGATGGAGGTGTATATGAGGGTGAGTGGAGACGAGGAACGAGAAACGGGATTGGAAAAATGCGATGGCGTTCTGGAGCAATGTATGAGGGTGAATTCTCTGGTGATTATATCCATGGTACGGGAACATATATTGGTTCTGAGAAATTGACCTATAAAGGTCGGTGGCGACTGAATCTTAAACATGGTCTTGGTTATCAAGTTTATCCTAATGGAGATATCTTTGAAGGGTCTTGGATACAAGGAACGCCAGAGGGGCCTGGAAAGTATACCTGGGCCAACGGAAATGTATACTCGGGGAATATGAGAGGTGGGACAATGTCAGGAAAAGGAATTCTCACCTGGATAACCGGGGACTCGTTTGAAGGAAGCTGGTTAAATGGCATGATGCATGGGTTAGGAGTGTATACTTGGAGTGATGGAGGCTGCTATGTCGGGACTTGGACACGTGGTCTAAAAGACGGAAAGGGGACCTTTTATCCGAGAGGCAACCGCCTTCCAACTGTGCAAGAGATTTACCTCAGTGCCTTGCGTAAAAGGGGGCTATTGCCAGACTTGAGAAAGCAGAAGCAGGTGGGAGATGTCATGGTTGGTCAGAACCAGAGACCTCAGTCTAATAGAAGAAATGTTTCTCTTGAAAGGCGTTGGAGTCTTGAGGTATCTATTGAGAAAGTGATTGGGCATGATCCAGCTTCCGATTTAACAGAATCTGTACCAGAAAGCGGAGATAAAGAGGCTAATGCCAAGATCCCAATTTTGGAACGAGAGTACATGCAAGGTGTATTAATAAGTGAGCTAGTGTTAGATAATATGTTTTCGTCAACATCTAGAACAGCAAGACAACTTCAAAGAAAACTCAAAGAGATAAAAAGACCCGGTGAAACAATCATTAAAGGTCACCGGAGTTATGATCTGATGCTCAGTTTGCAGCTTGGAATAAGGTATACTGTGGGCAAGATTACACCTGTACAGAGACGAGAAGTTAGAACATCAGATTTTGGTGCTAAAGCAAGCTTTTGGATGGATTTTCCTAAAGAAGGATCTCAATTAACACCTACTCACCAATCAGATGATTTTAAATGGAAAGACTACTGCCCGATGGTGTTCAGAAATTTAAGAGATATGTTCAAGATTGATGCCGCCGACTACATGATGTCCATTTGTGGAAATGATGCTCTGAGGGAACTATCTTCCCCTGGAAAAAGTGGCAGTGTCTTTTTCCTCTCTCAGGACGATCGTTTCATGATCAAGACACTGCGAAGATCTGAAGTCAAGGTTCTTCTAAGAATGCTTCCAGACTATCATCACCATGTGAAGTCTTATGAAAATACACTCATCACTAAATTTTTTGGCCTGCACAGGATTATACCTTCTAGTGGTCAAAAGTTTCGCTTTGTTGTAATGGGAAATATGTTTTGCACAGAATTAAGGATCCACCGGAGGTTTGATTTAAAAGGTTCGTCCCTTGGACGGTCATCCGACAAGATAGAAATTGACGAGAACACCACTCTTAAAGATTTGGATCTGAACTACAGCTTCTACTTGGAACCATCTTGGCGGGAGTCTTTATTGAAGCAGATCGAAATAGACAGCAAGTTTTTGGAAGCACAACACATTATGGACTATAGCCTTCTTTTAGGTGTTCATTATCGAGCTCCCCAACATCTACGTCGTACGTCATACAACCCAAGTACTAGCGGGGATGGATTAGCAATTCTTGCAGAGGAAGACCCTCTAGAGGATGAAGTATTGAACTATCCACAAGGCCTTGTTCTGGTTCCTCGAGGAGACGATAACAGTGTTGTTGTAGGGCCTCATGTGAGGGGTAATCGGTTGCGAGCTTCATCCGCTGGTGATGAGGAGGTGGATCTACTTCTACCTGGTACAGCAAGACTCCAAATTCAGCTCGGCGTGAACATGCCATCGAGGGCAGAGCTGATTCCAGGAAAACAGGAAAAGCAAATGTTCCACGAAGTATACGATGTCGTACTGTACCTCGGTATCATTGACATATTGCAAGACTACAACATGACTAAGAGGATTGAGCATGCATATAAATCTTTTCAGTTTGATTCATTGTCTATTTCCGCTGTGGATCCTACGTTCTACTCGCATCGCTTCCTCGAATTTATTCAGAAAGTATTTCCGCCAAATGCTACGCCCGGTTAA 2412 0.437 MSGTVAVVDNLDGGALFCAERTQSLDANSSIDHLSILTNGEAGHSSEIVGFRVGELLLSNGESYSGSLLGDIPEGQGTYVWSDGGVYEGEWRRGTRNGIGKMRWRSGAMYEGEFSGDYIHGTGTYIGSEKLTYKGRWRLNLKHGLGYQVYPNGDIFEGSWIQGTPEGPGKYTWANGNVYSGNMRGGTMSGKGILTWITGDSFEGSWLNGMMHGLGVYTWSDGGCYVGTWTRGLKDGKGTFYPRGNRLPTVQEIYLSALRKRGLLPDLRKQKQVGDVMVGQNQRPQSNRRNVSLERRWSLEVSIEKVIGHDPASDLTESVPESGDKEANAKIPILEREYMQGVLISELVLDNMFSSTSRTARQLQRKLKEIKRPGETIIKGHRSYDLMLSLQLGIRYTVGKITPVQRREVRTSDFGAKASFWMDFPKEGSQLTPTHQSDDFKWKDYCPMVFRNLRDMFKIDAADYMMSICGNDALRELSSPGKSGSVFFLSQDDRFMIKTLRRSEVKVLLRMLPDYHHHVKSYENTLITKFFGLHRIIPSSGQKFRFVVMGNMFCTELRIHRRFDLKGSSLGRSSDKIEIDENTTLKDLDLNYSFYLEPSWRESLLKQIEIDSKFLEAQHIMDYSLLLGVHYRAPQHLRRTSYNPSTSGDGLAILAEEDPLEDEVLNYPQGLVLVPRGDDNSVVVGPHVRGNRLRASSAGDEEVDLLLPGTARLQIQLGVNMPSRAELIPGKQEKQMFHEVYDVVLYLGIIDILQDYNMTKRIEHAYKSFQFDSLSISAVDPTFYSHRFLEFIQKVFPPNATPG 803
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g1795 803 CDD PIPKc_AtPIP5K_like 383 795 - -
Lal1g1795 803 Gene3D Phosphatidylinositol Phosphate Kinase II Beta 369 551 IPR027484 -
Lal1g1795 803 SUPERFAMILY SAICAR synthase-like 379 796 - -
Lal1g1795 803 Gene3D - 53 96 - -
Lal1g1795 803 Gene3D - 162 207 - -
Lal1g1795 803 Gene3D - 112 161 - -
Lal1g1795 803 Gene3D - 208 249 - -
Lal1g1795 803 PANTHER PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE 283 799 IPR023610 -
Lal1g1795 803 PANTHER PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE 19 276 IPR023610 -
Lal1g1795 803 PIRSF PIP5K_plant 7 800 IPR017163 GO:0005524|GO:0016308
Lal1g1795 803 Gene3D - 552 796 - -
Lal1g1795 803 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 59 186 - -
Lal1g1795 803 ProSiteProfiles Phosphatidylinositol phosphate kinase (PIPK) domain profile. 380 796 IPR002498 GO:0016307|GO:0046488
Lal1g1795 803 Pfam Phosphatidylinositol-4-phosphate 5-Kinase 469 794 IPR002498 GO:0016307|GO:0046488
Lal1g1795 803 SMART PIPK_2 410 797 IPR002498 GO:0016307|GO:0046488
Lal1g1795 803 Pfam MORN repeat 225 246 IPR003409 -
Lal1g1795 803 Pfam MORN repeat 179 200 IPR003409 -
Lal1g1795 803 Pfam MORN repeat 87 108 IPR003409 -
Lal1g1795 803 Pfam MORN repeat 64 86 IPR003409 -
Lal1g1795 803 Pfam MORN repeat 156 178 IPR003409 -
Lal1g1795 803 Pfam MORN repeat 133 154 IPR003409 -
Lal1g1795 803 Pfam MORN repeat 110 127 IPR003409 -
Lal1g1795 803 Pfam MORN repeat 202 223 IPR003409 -
Lal1g1795 803 PANTHER PHOSPHATIDYLINOSITOL 4-PHOSPHATE 5-KINASE 283 799 - -
Lal1g1795 803 PANTHER PHOSPHATIDYLINOSITOL 4-PHOSPHATE 5-KINASE 19 276 - -
Lal1g1795 803 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 173 244 - -
Lal1g1795 803 SMART morn 62 83 IPR003409 -
Lal1g1795 803 SMART morn 223 244 IPR003409 -
Lal1g1795 803 SMART morn 200 221 IPR003409 -
Lal1g1795 803 SMART morn 85 106 IPR003409 -
Lal1g1795 803 SMART morn 131 152 IPR003409 -
Lal1g1795 803 SMART morn 177 198 IPR003409 -
Lal1g1795 803 SMART morn 108 129 IPR003409 -
Lal1g1795 803 SMART morn 154 175 IPR003409 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g1795 Lal-Chr1 20281685 20288975 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g1795 14 799 Acyl Lipid Metabolism Gene Families AT3G09920 74.597 0.0 1228
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g1795 K00889 - gmx:100805371 1370.53
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g1795 1 20281685 20288975 Lal1g1795 1 20281685 20288975 ECH
Lal1g1795 1 20281685 20288975 Lal20g0118 20 769037 775784 LSH
Lal1g1795 1 20281685 20288975 Lal13g1536 13 15144604 15148719 PCT
Lal13g1536 13 15144604 15148719 Lal1g1795 1 20281685 20288975 PCT