Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g1536 ATGATGGGTAAAGATAGTAGTGTTATGAAGGCATGGGAAGCAACGGTGAGGAAGACACAAGCGGTTGCGAAGAAGCGCGCAAATAGCTTATTTGGAACAACTTCTGTGGCCCATGCAGATGAGGATGAGAAAAGGGATGACCAAGATGGAAGTGATCAAGGAACTGAGCTATATCATGCAGAGAAGGTTCTCCCCAATGGGGATTACTATAAGGGAGAATGGGTAGAAAATTTTCCACATGGGAATGGAAAATATTTGTGGAGTGATGGGTGCATGTATGTTGGGGAATGGTTCCAAGGGAAAACTATGGGGAAGGGTAGGTTCACTTGGCCTTCTGGGCCAACTTATGAAGGGGAGTTCAAAAGTGGTTATATGGATGGGACAGGTACATACACATCTTCTAATGGAGAGGTTTATAAGGGAAATTGGGTCATGAATTTGAAACATGGTCAAGGTTTGAAGAGTTTTGCGACCGGTGATCAGTACGATGGTGAATGGCGTCGGGGGTTGCAGGATGGTCAGGGGAGATACCAGTGGAAAGATGGGAACCATTATGTTGGAGAATGGAGGAATGGGACTATTTGGGGTAAAGGGTCATTTTTTTGGACTAATGGTAATACATATGATGGGTATTGGGAAGATGGTTTACCTAATGGAAGTGGAACATTTAAATGGCCTGATGGAACTTTTTATGTAGGTAATTGGAGTAAGGATCTAAGAGAACAGAGTGGGACATACTATCCACCTGGGTCATCACAGGAAGGGCATCTAGATTGGGATCCTCAAGAAGTGTTTAATGAGTTGAGTAAGTATCCGATTTGTCCCGGCGAGAAGGTTTCGATTTTACCATCACAGAAGAGACTTGCAGTTTGGAGGTCTACAAAAGGAGGAGATAGTACTAAACCAAGGAGAATGTCAGTGGATGCTAGGGTAAGTGTAGGATTGGAGAAGCCAAGTGATAGAATGCAGTTATGGGGTGGTGGGGAGGGTGATTTTAGTGGTAGTCGAACTCCGGCTAAGGTCGGTGCTTTGCACGATGAGTTGTTGGGATTACAGATAGATCCTGCTAATCCAAGAGGGACTCAACTCAATACTCTGAAAGCACCAAGAAAATCAAAGAGGCAGGGAGAGACCATATGCAAAGGACACAAAAATTATGATCTCATGCTCAATTTGCAGCTAGGAATAAGGCATTCTGTTGGAAGACCTGCCCCCTCAGCATCTCTTGATCTAAAGCCTTCAGCTTTTGATCCCAAGGAGAAAGTTTGGACAAGATTTCCTCCCGAAGGATCCAAATATACTCCACCGCATCCGTCGTGTGAGTTCAAGTGGAAGGACTATTGTCCAGTAGTTTTTAGGACTCTTCGGAAGTTATTCAAAGTGGATGCAGCTGATTACATGTTATCCATATGCGGAAATGACGCTCTTCGTGAACTTTCCTCTCCTGGGAAAAGTGGTAGCTTCTTTTACTTGACAAATGATGACCGTTACATGATTAAGACAATGAAGAAAGCTGAAGCAAAAGCTCTTTTGAGAATGCTTCCGGCTTACTACAATCATTTTCGAGCATTCGAAAATTCTCTACTAACAAAGTTTTATGGCCTGCACTGTGTAAAGTTAACCGGAGCTGCTCAGAAAAAGGTTCGATTTATCATAATGGGTAACCTCTTTTGTTCCGAGTATACCATTCATAGACGCTTTGATTTGAAGGGTTCTTCACTTGGCCGCATAACAGACAAGCCTGAGTCTGAGATTAGTGAAACCACTATTCTTAAAGACCTTGATCTAAATTTTATATTTCGACTGCAAAAATCTTGGTTTCAAGAGTATTTCAGGCAAATTGACCGGGATTGTGAGCTTCTGGAGCAGGAAGGAATTATGGACTATAGTTTGCTGGTTGGTATACATTTCAGAGATATATCAGCAGATGGAGATCTTATTCCTTCAGGAACTCAAACTCCTGGTGGTGATTCATATAGTGAAGTAACTCCCCGCGTTTCAAGAGCAGATGTGGATCAACTTCTTCTAGACCCTTCCAGGTGGGCAAGTATCAAATTAGGTGTGAATATGCCAGCAAAGGTTGAAAGGACAGTGAGAAGAAGTGATTGTGAATTACAACTTGTAGGAGAGCCAATTGGAGAATTCTATGAGGTGGTACTGTTTTTCGGTATCATAGACATACTTCAAGACTATGACATTAGCAAGAAGCTTGAGCATGTCTACAAGTCCATTCAATACGATCCAACTTCTATATCAGCTGTTGATCCAAGACAATACTCGAAGCGATTTCGCGACTTCATATTCAAAGTATTTTCCGAGGACTCTTGA 2328 0.4253 MMGKDSSVMKAWEATVRKTQAVAKKRANSLFGTTSVAHADEDEKRDDQDGSDQGTELYHAEKVLPNGDYYKGEWVENFPHGNGKYLWSDGCMYVGEWFQGKTMGKGRFTWPSGPTYEGEFKSGYMDGTGTYTSSNGEVYKGNWVMNLKHGQGLKSFATGDQYDGEWRRGLQDGQGRYQWKDGNHYVGEWRNGTIWGKGSFFWTNGNTYDGYWEDGLPNGSGTFKWPDGTFYVGNWSKDLREQSGTYYPPGSSQEGHLDWDPQEVFNELSKYPICPGEKVSILPSQKRLAVWRSTKGGDSTKPRRMSVDARVSVGLEKPSDRMQLWGGGEGDFSGSRTPAKVGALHDELLGLQIDPANPRGTQLNTLKAPRKSKRQGETICKGHKNYDLMLNLQLGIRHSVGRPAPSASLDLKPSAFDPKEKVWTRFPPEGSKYTPPHPSCEFKWKDYCPVVFRTLRKLFKVDAADYMLSICGNDALRELSSPGKSGSFFYLTNDDRYMIKTMKKAEAKALLRMLPAYYNHFRAFENSLLTKFYGLHCVKLTGAAQKKVRFIIMGNLFCSEYTIHRRFDLKGSSLGRITDKPESEISETTILKDLDLNFIFRLQKSWFQEYFRQIDRDCELLEQEGIMDYSLLVGIHFRDISADGDLIPSGTQTPGGDSYSEVTPRVSRADVDQLLLDPSRWASIKLGVNMPAKVERTVRRSDCELQLVGEPIGEFYEVVLFFGIIDILQDYDISKKLEHVYKSIQYDPTSISAVDPRQYSKRFRDFIFKVFSEDS 775
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g1536 775 Gene3D Phosphatidylinositol Phosphate Kinase II Beta 371 555 IPR027484 -
Lal13g1536 775 Gene3D - 556 771 - -
Lal13g1536 775 Gene3D - 48 99 - -
Lal13g1536 775 Gene3D - 145 196 - -
Lal13g1536 775 Gene3D - 210 267 - -
Lal13g1536 775 Gene3D - 100 144 - -
Lal13g1536 775 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 65 192 - -
Lal13g1536 775 MobiDBLite consensus disorder prediction 37 56 - -
Lal13g1536 775 SMART PIPK_2 412 772 IPR002498 GO:0016307|GO:0046488
Lal13g1536 775 Pfam MORN repeat 116 137 IPR003409 -
Lal13g1536 775 Pfam MORN repeat 231 251 IPR003409 -
Lal13g1536 775 Pfam MORN repeat 185 207 IPR003409 -
Lal13g1536 775 Pfam MORN repeat 162 183 IPR003409 -
Lal13g1536 775 Pfam MORN repeat 208 229 IPR003409 -
Lal13g1536 775 Pfam MORN repeat 139 160 IPR003409 -
Lal13g1536 775 Pfam MORN repeat 70 92 IPR003409 -
Lal13g1536 775 Pfam MORN repeat 93 113 IPR003409 -
Lal13g1536 775 MobiDBLite consensus disorder prediction 32 56 - -
Lal13g1536 775 PIRSF PIP5K_plant 5 775 IPR017163 GO:0005524|GO:0016308
Lal13g1536 775 Pfam Phosphatidylinositol-4-phosphate 5-Kinase 471 769 IPR002498 GO:0016307|GO:0046488
Lal13g1536 775 PANTHER PHOSPHATIDYLINOSITOL 4-PHOSPHATE 5-KINASE 4 18 774 - -
Lal13g1536 775 CDD PIPKc_AtPIP5K_like 385 770 - -
Lal13g1536 775 PANTHER PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE 18 774 IPR023610 -
Lal13g1536 775 ProSiteProfiles Phosphatidylinositol phosphate kinase (PIPK) domain profile. 384 771 IPR002498 GO:0016307|GO:0046488
Lal13g1536 775 SUPERFAMILY SAICAR synthase-like 381 771 - -
Lal13g1536 775 MobiDBLite consensus disorder prediction 354 376 - -
Lal13g1536 775 SMART morn 183 204 IPR003409 -
Lal13g1536 775 SMART morn 91 112 IPR003409 -
Lal13g1536 775 SMART morn 137 158 IPR003409 -
Lal13g1536 775 SMART morn 114 135 IPR003409 -
Lal13g1536 775 SMART morn 68 89 IPR003409 -
Lal13g1536 775 SMART morn 229 250 IPR003409 -
Lal13g1536 775 SMART morn 160 181 IPR003409 -
Lal13g1536 775 SMART morn 206 227 IPR003409 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g1536 Lal-Chr13 15144604 15148719 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal13g1536 1 775 Acyl Lipid Metabolism Gene Families AT3G56960 68.996 0.0 1140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal13g1536 K00889 - gmx:100782728 1388.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal13g1536 13 15144604 15148719 Lal13g1536 13 15144604 15148719 ECH
Lal1g1795 1 20281685 20288975 Lal13g1536 13 15144604 15148719 PCT
Lal20g0118 20 769037 775784 Lal13g1536 13 15144604 15148719 PCT
Lal13g1536 13 15144604 15148719 Lal1g1795 1 20281685 20288975 PCT
Lal13g1536 13 15144604 15148719 Lal20g0118 20 769037 775784 PCT