Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal20g0058 ATGTATATCGTAGAAAGTGATTATTTTGCGTCACAAAGAATGAAGGGTATTGTTTCATTGGTAAAAGGGAGGGTTGGTCCAAGTGGGTTTGGTTCAGCTTCAACTGCAGAGGAGGTTACTGAAGGAATTGATGCCACTAACCTCACTGTAATTATCACAGCAAGTGGAATTGGGTTGGAGACAGCAAGAGTTTTGGCTCTTAGAAAGGCACATGTGATCATTGCTGTAAGAAACATGGTGTCTGGAAATGAAGCTAGACAACATATACTTGATGAGAACCAATCTGCTAGAGTGGACATACTCAACCTTGATCTAAGCTCGGTTACTTCTGTCAGATCATTTGTCGAGAAATTCATCGCTCTCGATCTTCCTCTCAATATCTTAATAAACAATGCTGGAGTCATGTTCTGCCCTTTTAGTCTCTCAGAAGATGGTGTTGAGATGCAGTTTGCAACAAATCATGTTGGCCATTTCCTCTTGACAAGTCTTCTTCTTGACAAAATGAAACAAACTGCAAAAGCCACTGGAGTTGAGGGAAGGATCATAAATCTGTCATCAATTGCTCATAATTACACTTACAGAAAGGGTATTAGATTTGATAAGATCAATGACCGAAAAGGGTATGTTTCAGTTTGA 636 0.3962 MYIVESDYFASQRMKGIVSLVKGRVGPSGFGSASTAEEVTEGIDATNLTVIITASGIGLETARVLALRKAHVIIAVRNMVSGNEARQHILDENQSARVDILNLDLSSVTSVRSFVEKFIALDLPLNILINNAGVMFCPFSLSEDGVEMQFATNHVGHFLLTSLLLDKMKQTAKATGVEGRIINLSSIAHNYTYRKGIRFDKINDRKGYVSV 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal20g0058 211 Pfam short chain dehydrogenase 51 193 IPR002347 -
Lal20g0058 211 Gene3D - 40 210 - -
Lal20g0058 211 PANTHER NAD(P)-BINDING ROSSMANN-FOLD SUPERFAMILY PROTEIN 16 209 - -
Lal20g0058 211 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 50 195 IPR036291 -
Lal20g0058 211 PRINTS Glucose/ribitol dehydrogenase family signature 49 66 IPR002347 -
Lal20g0058 211 PRINTS Glucose/ribitol dehydrogenase family signature 123 134 IPR002347 -
Lal20g0058 211 PRINTS Glucose/ribitol dehydrogenase family signature 173 189 IPR002347 -
Lal20g0058 211 PANTHER RETINOL DEHYDROGENASE 16 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal20g0058 Lal-Chr20 399546 400873 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal20g0058 K11153 - gmx:100801849 322.013
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal20g0058 20 399546 400873 Lal20g0058 20 399546 400873 ECH
Lal20g0058 20 399546 400873 Lal13g1086 13 8172222 8181061 PCT
Lal20g0058 20 399546 400873 Lal24g0817 24 6470739 6477900 PCT
Lal13g1086 13 8172222 8181061 Lal20g0058 20 399546 400873 PCT
Lal24g0817 24 6470739 6477900 Lal20g0058 20 399546 400873 PCT