Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal20g0045 ATGGAAGAAGCGTTGGAACTTGCACGCGCCAAAGACACAAAGGAACGAATGGCTGGAGTAGAACGTCTCCACCAACTTCTAGAAGCTTCTAGAAAGAGCCTCACATCTTCTGAAGTAACCTCTCTTGTTGATTCCTGTTTAGATCTATTGAAGGATAACAACTTCAGAGTCTCACAGGGCGCGCTTCAGGCACTCGCCTCCGCCGCCGTTCTCTCCGGTGACCACTTCAAGCTCCACTTCAACGCCCTCGTTCCTGCCGTCGTTGACCGCCTAGGCGATTCAAAGCAGCCTGTTCGTGACGCCGCTAGAAGACTCTTGCTCACTCTCATGGAGGTTTCTTCTCCTACAATAATTGTTGAAAGGGCAGGGTCCTTTGCTTGGGCACACAGAAGCTGGAGAGTCCGGGAGGAGTTCACACGAACTGTCACATCTGCAATTGATTTATTTGCATCTACTGAGCTCCCGCTTCAACGGGCTATCTTTCCTCCTGTTTTGCATTTGCTGAATGACCCTAATCCTTCTGTTAGGGAAGCAGCTATTTTGTGCATTGAGGAGATGTATGTACAAGCTGGGCCTCAATTTCGTGATGAACTTCAACGCCACAACCTTCCTTCATCTTTGGTGAAAGATATTAATGCCCGGCTAGAGGGAATTCAACCAAAAGTTCGTGCTTCAGATGGTGTTCCGAGTGGTTATATTACTGGGGAAATTAAGCCTTTGAGTGTTAATCCCAAGAAAAGTAATCTAAAGGCTAAAAATTCAACTAGGGAGACCTCTCTTTTTGGAGGAGATGGTGATGCCGCTGAGAAACCCTTAGACCCCATCAAGGTATATTCAGAGAAGGAGTTAATCAGGGAAATTGAGAAGATTGCGTCTACCCTTGTACCAGAAAAAGACTGGTCAATTCGTATTGCTGCTATGCAGAGAATTGAAGGTCTTGTTCTAGGAGGTGCTGCTGATTATCCATGTTTCCGTGGACTTCTGAAACAACTTATTGGACCATTAAGCACACAATTGTCAGATCGAAGGTCTAGCATTGTCAAGCAGGCTTGCCATTTACTGTGCTTTTTGTCAAAGGAACTCTTGGGTGATTTTGAAGTATGTGCTGAAATGTTCATTCCAGTCCTCTTCAAGCTGGTTGTGATTACTGTGCTTGTAATTGCAGAGTCTTCAGACAACTGCATTAAAACGATGCTGCGCAACTGCAAAGTTGCTCGTGTGCTTCCTCGTATAGCTGATTGTGCAAAAACTGATCGCAATGCAGTACTTCGTGCAAGGTGTTGTGAATATGCGCTTTTGGTCCTTGAACATTGGCCTGATGCACCAGAAATACACCGATCGGCTGATTTATATGAGGATATGATAAAGTGTTGTGTCAAAGATGCAATGAGTGAGGTACGATCTACTGCAAGGATGTGCTACAGAATGTTTGCGAAAACTTGGCCAGAGCGTTCTCGACGCATATTTTTGTCCTTCGACCCTGTTATTCAAAGGTTAATAAATGAAGAAGATGGAGGAATACATAGGCGACATGCTTCACCTTCCGTTCGTGATAGAGGTGGAACGATGTCATTACCCAGTCAAGCTGCTGCTACATCTTATCTATCTGGTTATGGAACTTCAGCTATTGTTGCAATGGATAGAAGTTCAAGTTTATCATCTGGGACATCTATCTCCTCTGGTGTACTTCTGTCGCAAGCTAAGTCACTTGGAAAGGGTACAGAACGAACTTTGGAAAGTGTTTTACATGCAAGCAAACAGAAGGTCTCTGCTATTGAAAGCATGCTTAGAGGTCTGGATTTGTCTGATAAACACAATTTATCTCAACGGCCATCTAGTTTGGATCTAGGAGTTGACCCTCCATCATCTCGTGATCCACCATTCCCCGCTGCTGTTCCCGCCTCTAATCATTTGACAAGCTCTTTAACAACAGAATCAACTGCGTCTGGTGTCAATAAGGGTAGTAAAAGAAATGGTGGTCTAGTTTTGTCTGACATAATTACTCAAATTCAAGCTTCCAAAGATTCTGCCAAATTATCATATCATAGTAATGTTGGTATTGAGCCTTTATCATATTCGAGTAAAAGGGGTCCTGAGAGATTGCAAGAAAGAAGTTCTGTTGAGTACAACAGTGACATTAGGGAGGCTAGGAGATTTAAGAATCCCAACACTGATAAACATTATTTGGATGGTCCTGATAGAAATGGAAACTTTAGGGATTCACATAATAGTTATGTGCCCAATTTCCAGAGGCCACTGTCGAGAAAGAATGTATCTGGTCGTATGTCTGCTGGCAGAAGGAGTGTTGATGATAATCAGGTGTCTGTTGGAGAGATGGCAAGTCATGTAGATGGACCGACATCTCTTCAAGAAGCTTTGAGTGAAGGACTAAGTTCAGGCTCTGACTGGTCTGCAAGGGTTGCTGCCTTCAATTATCTACATTCTTTGTTACAGCAAGGTCCAAAGGGAATTCAAGAAGTTGTCCAGAATTTTGAGAAAGTAATGAAGTTGTTTTTTCAACACTTGGATGATCCTCACCATAAAGTTGCGCAGGCTGCTCTTTCAACACTTGCAGATATTGTTCCAGTATGCCGAAAGCCTTTTGAGGGTTACATGGAAAGAATATTACCCCATGTATTTTCTCGGTTAATTGACCCAAAAGAGCTTGTTAGGCAGCCATGTTCAACAACTTTAGAAGCTGTTAGTAAAAGTTACAGTGTAGATTCTCTCTTGCCTGCATTGTTACGCTCACTAGATGAACAAAGATCTCCAAAGGCTAAATTAGCTGTTATTGAATTTGCTATCAATTCCTTTAACAAACATGCAGTGAATCCGGACGGTGCTGCTAATATCGGCATCCTAAAATTATGGTTTGCTAAGTTAATCCCATTGGTTCATGACAAAAATACAAAACTTAAAGAAGCGGCTATTACATGCATTATATCAGTGTACTCTCACTTTGATTCAATTGCAGTTCTTAACTTCATTCTTAGTTTGTCAGTTGAAGAACAAAATTCCTTGAGACGAGCTCTTAAACAGTATACTCCTCGTATTGAAGTAGACCTAATGAACTATCTGCAGAACAAGAAAGAGAGACAACGTTCTAAATCTTCATATGATCCATCTGATGTTGTGGGAACATCCTCTGAAGATGGATATGTCGGTTTCTCTAGGAAAGCTCATTATCTTGGAAGATATTCTGCTGGTTCTGTAGATAGTGATAGTGGCAGGAAGTGGAGTTCCCAGGATTCAACCCTGATTAAGGCCAGTCTTGAGCAAGCAGCTTCTGGTGAAACTCAGGAATATTTGTATCAGAATATTGAGGCTGATTATAACAGTGGTAGTCTTAGTTTAAAAGCTAAAGATCTTCCTTATGCAGTCAATCCAATGGATCAAAACTTTGGCTCTCAGACTAACCAACTTGGACATATGGACCATAGCATGAACTTTGAGGGTCTTTCAACTCCTCGTCTGGATGTTAATGGTTTGATGTCATTGGAGAACTTAAATGTTACTGAAGACTATGTACTTGACAAAGAACATCCTTCTGAATTGGAACCTAATCATCACTCAGCTGAAGCTCTAAAGATTTACTCCTTGACAGACACAAGACCCAGTGTTCCCCAAATTCTTAATGTGATATGCAGTGGGGGTGATGGAAGCTCTATTTCAAGTAAGAGGACTGCTCTTGAACAGTTAGTTGAGGCGTCTACAACAAATGATCATTCTATTTGGACGAAGTACTTCAATCAGATTTTGACAGTTGTGCTTGAGGTGCTGGATGATTCAGATTCCTCAATCAGGGAACTCGCTCTTTCTTTGATAGTTGAGATGCTTAAAAACCAGAAAGATGCCATGGAGAACTCAGTTGAGATTGTAATTGAGAAGCTGCTTCATGTTACAAAAGATAATGCTGCTAAGGTCTCAAATGAAGCAGAGCACTGCCTGACCATTGTTTTATCACAGTACGATCCATTCAGATGTTTAAGTGTTATTGTGCCTCTACTGGACACTGAGGATGAGAAAACTCTGGTCACTTGCATTAATTGCTTGACAAAGCTTGTGGGCCGGCTCTCTCAAGAGGAACTGATGGCTAAGCTACCCTCGTTTCTGCCTGCTCTTTTTGAAGCTTTTGGAAATCAATGTGCAGATGTTCGCAAGACTGTTGTTTTCTGTCTTGTGGATATCTACATCATGCTTGGGAAAGCATTCTTGCCATATTTGCAAGGGCTTAACAGCACACAGTTGAAGTTAGTCACAATTTATGCCAATCGAATCTCACAGGCCAGGACAGGCAAAGCAATTGATGTCACTCATGACTAG 4323 0.421 MEEALELARAKDTKERMAGVERLHQLLEASRKSLTSSEVTSLVDSCLDLLKDNNFRVSQGALQALASAAVLSGDHFKLHFNALVPAVVDRLGDSKQPVRDAARRLLLTLMEVSSPTIIVERAGSFAWAHRSWRVREEFTRTVTSAIDLFASTELPLQRAIFPPVLHLLNDPNPSVREAAILCIEEMYVQAGPQFRDELQRHNLPSSLVKDINARLEGIQPKVRASDGVPSGYITGEIKPLSVNPKKSNLKAKNSTRETSLFGGDGDAAEKPLDPIKVYSEKELIREIEKIASTLVPEKDWSIRIAAMQRIEGLVLGGAADYPCFRGLLKQLIGPLSTQLSDRRSSIVKQACHLLCFLSKELLGDFEVCAEMFIPVLFKLVVITVLVIAESSDNCIKTMLRNCKVARVLPRIADCAKTDRNAVLRARCCEYALLVLEHWPDAPEIHRSADLYEDMIKCCVKDAMSEVRSTARMCYRMFAKTWPERSRRIFLSFDPVIQRLINEEDGGIHRRHASPSVRDRGGTMSLPSQAAATSYLSGYGTSAIVAMDRSSSLSSGTSISSGVLLSQAKSLGKGTERTLESVLHASKQKVSAIESMLRGLDLSDKHNLSQRPSSLDLGVDPPSSRDPPFPAAVPASNHLTSSLTTESTASGVNKGSKRNGGLVLSDIITQIQASKDSAKLSYHSNVGIEPLSYSSKRGPERLQERSSVEYNSDIREARRFKNPNTDKHYLDGPDRNGNFRDSHNSYVPNFQRPLSRKNVSGRMSAGRRSVDDNQVSVGEMASHVDGPTSLQEALSEGLSSGSDWSARVAAFNYLHSLLQQGPKGIQEVVQNFEKVMKLFFQHLDDPHHKVAQAALSTLADIVPVCRKPFEGYMERILPHVFSRLIDPKELVRQPCSTTLEAVSKSYSVDSLLPALLRSLDEQRSPKAKLAVIEFAINSFNKHAVNPDGAANIGILKLWFAKLIPLVHDKNTKLKEAAITCIISVYSHFDSIAVLNFILSLSVEEQNSLRRALKQYTPRIEVDLMNYLQNKKERQRSKSSYDPSDVVGTSSEDGYVGFSRKAHYLGRYSAGSVDSDSGRKWSSQDSTLIKASLEQAASGETQEYLYQNIEADYNSGSLSLKAKDLPYAVNPMDQNFGSQTNQLGHMDHSMNFEGLSTPRLDVNGLMSLENLNVTEDYVLDKEHPSELEPNHHSAEALKIYSLTDTRPSVPQILNVICSGGDGSSISSKRTALEQLVEASTTNDHSIWTKYFNQILTVVLEVLDDSDSSIRELALSLIVEMLKNQKDAMENSVEIVIEKLLHVTKDNAAKVSNEAEHCLTIVLSQYDPFRCLSVIVPLLDTEDEKTLVTCINCLTKLVGRLSQEELMAKLPSFLPALFEAFGNQCADVRKTVVFCLVDIYIMLGKAFLPYLQGLNSTQLKLVTIYANRISQARTGKAIDVTHD 1440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal20g0045 1440 Pfam HEAT repeat 160 186 IPR000357 GO:0005515
Lal20g0045 1440 MobiDBLite consensus disorder prediction 634 654 - -
Lal20g0045 1440 Coils Coil 1276 1296 - -
Lal20g0045 1440 SUPERFAMILY ARM repeat 6 402 IPR016024 -
Lal20g0045 1440 MobiDBLite consensus disorder prediction 246 260 - -
Lal20g0045 1440 Pfam CLASP N terminal 798 987 IPR024395 -
Lal20g0045 1440 Pfam CLASP N terminal 284 500 IPR024395 -
Lal20g0045 1440 MobiDBLite consensus disorder prediction 603 658 - -
Lal20g0045 1440 ProSiteProfiles HEAT repeat profile. 160 198 IPR021133 -
Lal20g0045 1440 Gene3D - 266 506 IPR011989 -
Lal20g0045 1440 MobiDBLite consensus disorder prediction 719 737 - -
Lal20g0045 1440 SMART TOG_3 778 1020 IPR034085 -
Lal20g0045 1440 SMART TOG_3 3 224 IPR034085 -
Lal20g0045 1440 SMART TOG_3 1196 1432 IPR034085 -
Lal20g0045 1440 SMART TOG_3 270 514 IPR034085 -
Lal20g0045 1440 PANTHER PROTEIN, PUTATIVE-RELATED 28 1432 - -
Lal20g0045 1440 Gene3D - 790 1015 IPR011989 -
Lal20g0045 1440 MobiDBLite consensus disorder prediction 244 265 - -
Lal20g0045 1440 ProSiteProfiles HEAT repeat profile. 83 121 IPR021133 -
Lal20g0045 1440 MobiDBLite consensus disorder prediction 719 770 - -
Lal20g0045 1440 MobiDBLite consensus disorder prediction 738 757 - -
Lal20g0045 1440 Gene3D - 1 221 IPR011989 -
Lal20g0045 1440 Gene3D - 1221 1432 IPR011989 -
Lal20g0045 1440 SUPERFAMILY ARM repeat 289 1430 IPR016024 -
Lal20g0045 1440 PANTHER CLASP 28 1432 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal20g0045 Lal-Chr20 324953 341319 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal20g0045 K16578 - gmx:100796697 2448.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal20g0045 20 324953 341319 Lal20g0045 20 324953 341319 ECH
Lal11g1107 11 14800761 14817711 Lal20g0045 20 324953 341319 LSH
Lal20g0045 20 324953 341319 Lal13g1074 13 8028663 8053210 PCT
Lal13g1074 13 8028663 8053210 Lal20g0045 20 324953 341319 PCT