Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g1107 ATGGAGGAAGCGTTGGAACTTGCACGCGCCAAGGACACGAAGGAGAGAATGGCGGGAGTGGAGCGTCTTCACCAACTTCTAGAAGCTTCTAGAAAGAGTCTCACCTCTTCTGAAGTAACCTCGCTTGTTGATTCGTGTTTGGATCTGTTGAAGGACAACAACTTCAGAGTCTCTCAGGGCGCGCTTCAGGCTCTTGCCTCCGCCGTCGTTCTCTCCGGCGAACACTTCAAGCTTCACTTCAACTCTCTCGTCCCCGCCGTTGTTGATCGCCTCGGTGATGCCAAACAACCTGTTCGCGATGCCGCGAGAAGACTCTTGCTCACTCTCATGGAGGTTTCTTCTCCTACAATAATTGTTGAAAGAGCAGGATCCTTTGCTTGGGCACACAAAAGCTGGAGAGTCCGGGAGGAGTTCACACGAACTGTCACATCTGCAATTAATTTATTTGCATCTACTGAGCTCCCGCTTCAACGGGCTATCCTTCCTCCTGTTTTGCATTTGCTGAATGATCCTAATCCTGCTGTTAGGGAAGCAGCTATTTTATGCATTGACGAGATGTATGTACAAGCTGGGAGTCAATTTCGTGATGAACTTCAACGCCATAATCTTCCATCATCTTTGGTGAATGATATTAATGCCCGGCTAGAAGGAATTCAACCAAAAGTTCACGCTTCAGATGGTGTTCCAAGTGGTTATATTACTGGGGAGATTAAGCCTTCGAGTGTTAATCCCAAGAAAAGTAGTCCAAAGGCTAAACATTCATCAAGGGAGGCCTCTCTTTTTGGAGGAGATGGTGATGTCACCGAGAAAACTGTTGACCCCATCAAGGTATATTCAGAGAAGGAGTTAATCAGGGAGGTTGAGAAGATTGTGTCTACCCTTGTACCAGAAAAAGACTGGTCATTTCGTATTGCTGCCATGCAGAGAATTGAAGGTCTCATTCTAGGAGGTGCTGCTGATTATCCGTCTTTTCGTGGACTTCTGAAACAACTTATTGGGCCGTTAAGCACACAGTTGTCAGATCGACGGTCTAGCATTGTGAAGCAGGCTTGTCATCTACTGTGCTTTTTGTCGAAGGAACTCTTGGGTGATTTTGAAGCATGTGCTGAAATGTTTATTCCAGTCCTTTTCAAGCTGGTTGTGATTACTGTGCTTGTAATTGCAGAGTCTTCAGATAACTGCATTAAAACGATGCTGCGCAACTGCAAAGTTTCTCGTGTGCTTCCACGTGTAGCTGATTGTGCAAAAAATGACCGCAATGCAATACTTCGTGCCAGGTGTTGTGAATATGCTCTTTTGATCCTGGAACATTGGCCTGATGCACCAGAAATACATCGATCAGCTAATTTATATGAGGATATGATAAAGTCTTGCGTCAAAGATGCAATGAGTGAGGTACGAGCTACTGCAAGGATGTGCTACAGAATGTTCGCAAAAACTTGGCCAGAACGTTCTCGTCGCTTATTTTTGTCCTTTGACCCTGTTATTCAAAGGCTAATAAATGAAGAGGATGGAGGAATACATAGGCGACATGCTTCACCTTCTGTTCGTGATAGAGGTGCTGCAATGTCATTATCCAGTCAAGCCTCCGCCTCTTCATATTTATCTGGTTATGGAACTTCTGCTATTGTTGCAATGGATAGAAGTTCAAGTTTATCATCAGGGACATCTATCTCCTCCGGTGTATTTCTGTCACAAGCCAAGTCCCTCGGAGAGGGTACAGAGCTAAGTTTGGAAAGTGTTTTACATGCAAGCAAACAGAAGGTCACTGCTATTGAAAGCATGCTTAGAGGCCTGAATTTGTCTGATAAGCCCAATTCATCTCATCGACCATCAAGTTTGGATCTAGGAGTTGCCCCTCCATCATCTCGTGATCCACCATTCCCGGCTGCTGTCCCTGCATCTAATCATTTGACAAGCTCTTTAACAACAGAATCAACTGCATCTTGTGTCAATAAAGGTAGTAAAAGAAATGGTGGGCTGGGCTTGTCTGACATAATTACTCAAATTCAAGCTTCCAAAGATTCTGCCAAGTTATCATATCATAGTAATGTTGGTATTGAGCCTTTATCATATTCGAGTAAAAGGGATCCTGAGAGATTACCAGAAAGAAATTCTGTTGAGTACAACAGTGACATTAGAGAGGCTAGGAGATTTATGAACCCCGATACTGATAAACATTATCTAGATGGTTCTTATAGAGATGGAAACTTTAGGGACTCACATAATAGTTATGTGCCCAATTTCCAGAGGCCATTATCGAGAAAGAATGTATCTGGACGTATGTCTGCTGGAAGGAGTTTTGATGATAACCAGCTCTCTCTTGGAGAGATGACACATTATGTAGAGGGACCAACATCTCTTCATGAAGCTTTGAGTGAAGGACTTCGTTCAGGTTCTGACTGGTCTGCAAGGGTTGCTGCATTCAATTATCTACACTCTTTGTTGCAGCAAGGTACAAAGGGAATTCAAGAAGTTGTCCTGAATTTTGAGAAAGTAATGAAGTTGTTTTTCCAGCACTTGGATGATCCCCACCATAAAGTTGCACAGGCTGCTCTTTCAACACTTGCAGATATCGTTCCAGCATGTCGGAAGCCTTTTGAAGGTTACATGGAAAGAATATTACCCCATGTATTTTCTCGGTTGATTGACCCGAAAGAGCTTGTTAGGCAGCCATGTTCATCAACTTTGGAAATTATTAGCAAAACTTACAGTGTAGATTCTCTCTTACCTGCATTGTTACGCTCACTAGATGAGCAAAGGTCTCCAAAGGCTAAATTGGCTGTTATTGAATTTGCAATCAATTCCTTCAATAAGCATGTGATGAATCCAGAAGGTGCTGCTAATATTGGCATCCTAAAATTATGGCTTGCCAAATTAATCCCATTGGTTCACGACAAAAATACAAAGCTGAAAGAAGTAGCTATTACATGCATTATATCATTGTACTCTCACTTTGATTCAATTGCAGTTCTTAACTTTATTCTTAGTTTATCAGTTGAAGAACAAAATTCCTTGAGACGAGCTCTTAAACAATACACTCCTCGTATTGAAGTAGACCTAATGAACTATCTGCAGAACAAGAAAGAGCGACAACGTTCTAAGTCTTCCTATGATCCATCTGATGTTGTGGGAACTTCCTCTGAAGATGGATATGTCGGTTTATCTAGGAAGGCTCATTACCTTGGAAGGTATTCTACTGGTTCAGTAGATAGTGATAGTGGCAGGAAGTGGAGTTCTCAAGATTCAACCCTGATTAAAGCCAGTCTTGACCAAGCAGCTTCTGGTGAAACTCGGGAACATTTGTATCAGAATATTGAGACTGATTGCAACAGTGGTAGTCTTGGTTCAAAAACTAAAGATCTTGTTTATGCAAGCAACCCAATGGGTCAAAACTTTGGCTTGCAAACTCGCCAACTTAGACATGTGGACAGTAGCTTGAACTTTGAGGGTCTTTTAACTCCTTGTCTGGATGTTAATGGTCTGATGTCATTAGAGAATTTAAATGTTGCTGAAGGCTATGTACATGACAAAAAACATCCTTCTGATTTGGAACTTAATCATCACTCAGCCGAAGCTTTCAAGGTTAACTCCTTGACAGACACAGGACCCAGCATTCCCCAAATTCTTCATGTGATATGCAGTGGTGGTGATGGAAGCTCTATTTCAAGTAAGCGGACTGCACTTGAGCAGTTAGTTGAAGCTTCTATGACAAATGATCATTCTATTTGGACGAAGTACTTCAATCAGATTTTAACAGTTGTGCTTGAAGAGTTGGATGATTCAGATTCCTCAATGAGAGAGCTTGCTCTTTCGTTGATAGTTGGAATGCTTAAAAACCAGAAAGATGCCATGGAGAATTCAGTTGAGATTGTAATTGAGAAGCTGCTTCATGGTACAAAAGATATCATTCCAAAGGTCTCAAATGAATCAGAGCACTGCCTGACCATTGTTTTATCACAGTACGATCCATTCAGATGTTTAAGTGTTATTGTCCCTCTACTGGTCACAGAGGATGAGGAAACTCTCGTCACGTGCATTAATTGCTTGACAAAGCTTGTGGTTCGGCTCTCTCAGGAGGAACTGATGGCTCAGTTACCCTCCTTTCTGCCTGCTCTTTTTGAAGCTTTTGGAAGCCAGAGTGCAGATGTTCGCAAGACTGTTGTTTTCTGTCTTGTGGATATCTACATCATGCTTGGGAAAGCATTCTTGCCATATTTGCAAGGGCTTAACAGCACACAGTTGAAGTTAGTCACAATTTATGCCAATCGAATCTCACAGGCCAGGACAGGCAAAGCAATTGATGCCACTAATCATTAG 4320 0.4231 MEEALELARAKDTKERMAGVERLHQLLEASRKSLTSSEVTSLVDSCLDLLKDNNFRVSQGALQALASAVVLSGEHFKLHFNSLVPAVVDRLGDAKQPVRDAARRLLLTLMEVSSPTIIVERAGSFAWAHKSWRVREEFTRTVTSAINLFASTELPLQRAILPPVLHLLNDPNPAVREAAILCIDEMYVQAGSQFRDELQRHNLPSSLVNDINARLEGIQPKVHASDGVPSGYITGEIKPSSVNPKKSSPKAKHSSREASLFGGDGDVTEKTVDPIKVYSEKELIREVEKIVSTLVPEKDWSFRIAAMQRIEGLILGGAADYPSFRGLLKQLIGPLSTQLSDRRSSIVKQACHLLCFLSKELLGDFEACAEMFIPVLFKLVVITVLVIAESSDNCIKTMLRNCKVSRVLPRVADCAKNDRNAILRARCCEYALLILEHWPDAPEIHRSANLYEDMIKSCVKDAMSEVRATARMCYRMFAKTWPERSRRLFLSFDPVIQRLINEEDGGIHRRHASPSVRDRGAAMSLSSQASASSYLSGYGTSAIVAMDRSSSLSSGTSISSGVFLSQAKSLGEGTELSLESVLHASKQKVTAIESMLRGLNLSDKPNSSHRPSSLDLGVAPPSSRDPPFPAAVPASNHLTSSLTTESTASCVNKGSKRNGGLGLSDIITQIQASKDSAKLSYHSNVGIEPLSYSSKRDPERLPERNSVEYNSDIREARRFMNPDTDKHYLDGSYRDGNFRDSHNSYVPNFQRPLSRKNVSGRMSAGRSFDDNQLSLGEMTHYVEGPTSLHEALSEGLRSGSDWSARVAAFNYLHSLLQQGTKGIQEVVLNFEKVMKLFFQHLDDPHHKVAQAALSTLADIVPACRKPFEGYMERILPHVFSRLIDPKELVRQPCSSTLEIISKTYSVDSLLPALLRSLDEQRSPKAKLAVIEFAINSFNKHVMNPEGAANIGILKLWLAKLIPLVHDKNTKLKEVAITCIISLYSHFDSIAVLNFILSLSVEEQNSLRRALKQYTPRIEVDLMNYLQNKKERQRSKSSYDPSDVVGTSSEDGYVGLSRKAHYLGRYSTGSVDSDSGRKWSSQDSTLIKASLDQAASGETREHLYQNIETDCNSGSLGSKTKDLVYASNPMGQNFGLQTRQLRHVDSSLNFEGLLTPCLDVNGLMSLENLNVAEGYVHDKKHPSDLELNHHSAEAFKVNSLTDTGPSIPQILHVICSGGDGSSISSKRTALEQLVEASMTNDHSIWTKYFNQILTVVLEELDDSDSSMRELALSLIVGMLKNQKDAMENSVEIVIEKLLHGTKDIIPKVSNESEHCLTIVLSQYDPFRCLSVIVPLLVTEDEETLVTCINCLTKLVVRLSQEELMAQLPSFLPALFEAFGSQSADVRKTVVFCLVDIYIMLGKAFLPYLQGLNSTQLKLVTIYANRISQARTGKAIDATNH 1439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g1107 1439 MobiDBLite consensus disorder prediction 226 265 - -
Lal11g1107 1439 PANTHER CLASP 28 1431 - -
Lal11g1107 1439 MobiDBLite consensus disorder prediction 600 651 - -
Lal11g1107 1439 PANTHER PROTEIN, PUTATIVE-RELATED 28 1431 - -
Lal11g1107 1439 Pfam CLASP N terminal 284 500 IPR024395 -
Lal11g1107 1439 Pfam CLASP N terminal 796 987 IPR024395 -
Lal11g1107 1439 Gene3D - 791 1014 IPR011989 -
Lal11g1107 1439 Pfam HEAT repeat 160 186 IPR000357 GO:0005515
Lal11g1107 1439 Gene3D - 267 506 IPR011989 -
Lal11g1107 1439 SMART TOG_3 1195 1431 IPR034085 -
Lal11g1107 1439 SMART TOG_3 282 514 IPR034085 -
Lal11g1107 1439 SMART TOG_3 3 224 IPR034085 -
Lal11g1107 1439 SMART TOG_3 780 1019 IPR034085 -
Lal11g1107 1439 SUPERFAMILY ARM repeat 6 401 IPR016024 -
Lal11g1107 1439 MobiDBLite consensus disorder prediction 634 651 - -
Lal11g1107 1439 ProSiteProfiles HEAT repeat profile. 160 198 IPR021133 -
Lal11g1107 1439 Gene3D - 1220 1431 IPR011989 -
Lal11g1107 1439 Gene3D - 1 223 IPR011989 -
Lal11g1107 1439 ProSiteProfiles HEAT repeat profile. 83 121 IPR021133 -
Lal11g1107 1439 SUPERFAMILY ARM repeat 288 1429 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal11g1107 Lal-Chr11 14800761 14817711 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal11g1107 K16578 - gmx:100796697 2412.49
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal11g1107 11 14800761 14817711 Lal11g1107 11 14800761 14817711 ECH
Lal11g1107 11 14800761 14817711 Lal20g0045 20 324953 341319 LSH
Lal11g1107 11 14800761 14817711 Lal13g1074 13 8028663 8053210 PCT
Lal13g1074 13 8028663 8053210 Lal11g1107 11 14800761 14817711 PCT