Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g1074 ATGGAAGAAGCGTTAGAACTCGTTCGCGCCAAGGACGCAAAGGAACGCATGGCTGGAGTGGAGCTTCTCCATCAACTTCTAGAAGCTTCTAGAAGAACTCTCACTTCGACGGAAGTAACTAACCTCGTTCATTGTTGCTTGGATCTGTTGAACGATAACAGTTTCAGAGTCTCTCAGGGCGCGCTTCAAGCATTGGCTTCCGCCGCCGTTCTCTCCGCCGAGAATTTCAAGCTTCACCTCAATGCGCTTGTTCCTGCTGTCGTTGATCGCCTCGGCGATGCAAAACAGCCGGTTTCCTCTCCTACAATAATTGTTGAAAGAGCAGGGTCCTTTGCTTGGACATGCAAAAGCTGGAGAGTCAGAGAGGAGTTTGCACGAACTGTCACATCTGCAATTGGTCTATTTTCATCTACTGAACTTACCCTTCAACGGTTGCTGAATGATCCGAATCCCGCTGTTAGGGAAGCAGCTTGTTTATGCACTGAAGAGATGTATGCACAAGCTGGGTCTCAATTTCGTGATGAACTTCAGCGCCACAATCTTCCTTCATCTTTGGTGAATGATATTAATGCCAGGCTAGAGGGCATTCAACCAAAAGTTCGCTCTTCAGATGGTAGTGGTTATAATTCCGGGGAAATTAAGCCTTTAAATGTTAATCCCAAGAAAAGTAGTCCAAAGGCTAAAAGTTCATCAAGGGAGAGCTCTCTTTTTGGAGGAGATGGTAATGTCACAGAGAAACCCATAGACCACATCAAGGTGTATTCAGAGAAGGAATTAATCAGGGAAATTGATAAGATTGTGTACACCCTTGTACCAGAAAAGGATTGGTCAATTCGTATTGCTGCCATGCAAAGAATTGAAGGTCTGGTTTTGGGAGGTGCTGCTGATTTTTCATGTTTCCATGGACTCTTGAAGCAACTTGTAGGACCTTTAAGCATGCAATTGTCAGATCGGAGGTCTACCATTGTGAAGCAGGCTTGCCATCTATTATGCTTATTGTCAAAGGACCTCATGGGTGATTTTGAAGCATGTGCTGAAATGTTCATACCAGTCCTTCTGAAGCTGGTTGTGATTACTGTGCTTGTAATAGCCGAGTCTGCAGATAACTGCATAAAAACAATGTTGTGCAACTGCAAAGTTGCCCGTGTGCTGCCTCGCATAGCTGATTGTGCAAAAAATGATCGTAATGCAGTACTTCGTGCAAGGTGTTGTGATTATGCTCTTTTGATGCTTGAAAATTGGCCTGATGCACCAGAAATACAGCGATCAGTTGATTTATACGAGGATATGATAAGATGTTGTGTTTCGGACGCAATGAGTGAGGTGCGATCTACTGCAAGGATGTGCTACAGAATGTTTGCAAAAACTTGGCCAGAGCGGTCCCGACGCCTATTTTCGTTCTTTGACCCTGCTATTCAAAGGTTAATAAATGAAGAGGATGGTGGAATACATAGGCGTCATGTGTCACCTTCCATTCATGACAGAAGTACACCAATGTCATTAACTAGTCAAGCTTCTGCTCCCTCTAATCTACCTGGTTATGGAACTTCTGCTATTGTTGCTATGAACAGAAATTCAAGTTTATCATCAGGCACATCTATTTCCTCTAGTGTTTTTCTGTCACAGGCTAAGTCACATGATAAAGGTATAGAACGTAGTTTGGAAAGTGTGTTGCATGCAAGCAAACAGAAAGTCACTGCTATTGAAAGCATGCTCAGAGGTTTGAATATGTCCGATAAGCATAATTTGGCTGCTCTACGGTCATCAAGTTTGGATCTAGGAGTTGACCCTCCATCATCTCGTGATCCACCATTCCCTGCAGTTGTCCCAGCATCTAATCATCTGACTAGCTCTTCAATGACAGAATCAACTGCCTCTGTTGTCAATAAAGGTATTAACCAAAATGGTGGTTTGGGTCTGTCTGACATAATCACCCAAATTCAATCTTCCAAAGATTCTGGCAAGTTATCATATCATAGTGATGTTGGTATCCAGTCTTTATCAGCATTGTCATCATATTCAAGTAAACGGGGTACTGAAAGATTACAAGAAAGAAGTTCCGTTGATGAAAACATCGATATTAAGGAGGCTGGGCGATATATGAACCGGAACACCAATAGGCATTTTATAGATACACCTTACAGAGATGACAACTTTAGGGATTTTCAGAATAATTATGTGCCTAATTTCCAGAGGCCGCTACTGAGAAAGAATGTAGCTGGACGTATGCCTGCTGGCAGGAGGAGTTTTGATGATAGCCATTTATCTCTTGTGTCAAATTATGTAGAGGGGCCAGCATCTCTTCATGAATCTCTGTGTGAAGGACTTAGTTCAGGTTCTAACTGGTCTGCTAGGCAAGGTCAAAAGGGAATTCAAGAAGTACTCCAGAATTTTGAGAAGGTCATGAAGTTGTTTTTCCAGCACTTGGATGATCCCCACCATAAAATTGCACAGGCTGCTCTTTCCACACTAGCAGATATCATTCTAGCATGCCGAAAGCCCTTTGAGGGTTATATGGAACGAATGCTGCCCCATGTGTTTTCTCGATTAATTGACCCCAAAGAGCTTGTTCGGCAAGCATGCTCAGCAACTTTGGAGGTTGTTAGCAAAACATACAGTATAGATTCTCTTTTACCTGCGTTGCTACGCTCACTCGATGAACAAAGGTCTCCAAAGGCAAAATTGGCTGTCATTGAGTTTGCAATCAGCTCCTTTAAGAAGCATGCAATGAATCCAGAAGGTGCCGCTAATATTGGCATCCTGAAATTATGGCTTGTTAAGTTAACTCCATTGGTTCATGACAAAAATACAAAGCTTAAAGAAGCAGCTATTACATGCATTATATCTGTGTACTCCCACTTTGATTCAACTGCAGTTCTGAATTTTATCCTTAGTTTGTCAGTTGAGGAACAAAATTCTTTGAGACGAGCCCTTAAGCAACGCACACCTCGCATTGAAGTAGAGTTGATGAACTATCTGCAGAACAAGAAAGAGCGACAACGTAAGTCTTCCTATGATCCATCCGATGTTGTGGGGTCATCTTCTGATGATGGATATGTCGGATTTTATAGGAAAACTCATTACCTTGGAAGGTATTCTGCTGGTTCTCTAGATAGTGATGGTGGAAAGAAGTGGACTTCCCACGATTCGACCATGATTAAAGCCATTACTGGCCTAGCAGCTTCTGATGAAACTCAGGAGCATTCATATCAGAATCCTGAGATTGATTCTAATAGCGGTATTCTCGATTCAAAAAGTAAAGATCTTACTTCTACATTCAATATGGCTCAAAACTTTGGTTTTGAAACTAGCCAAGTAGGACATGTAGACAATAGCATAAACTTGGAGGGTCTATCATCTCACCTGGATGCTAATGGTCTGATGTCATTAGAACATTTAAATATTTCTGATGGCTTTGAAAATGACAAAGACCATCTTTCCGATTGGAACCATAATAATCATTCAGCTGAAGAAGTGACGGTTAACTCCATGACAGACACAGGACCCAGCATTGTTCAAATTCTTCATATGATATGCAGTGGGGGTGATGGAAGCCTTGTTTCAAATAAGAAGACTGCACTTCAACAGCTAGTTGAAGCTTCTATAGTAAATGACCGTGCTGTTTGGACCCAGTATTTCAATCAGATTTTGACTGCTATACTTGAGGTGCTGGATGATCCAGATTCCTCAATTAGAGAGCTTACTCTTTCATTGATAGTTGAAATGCTTAAAAACCAGAAATATGCCATGGAAAATTCAGTCGAGGTTGTAATTGAAAAGCTGCTTAATGTTACAAAGGACATTGTTCCTAAGGTCTCGAATGAAGCAGAGCACTGCCTGACCATTATTTTATCTCATGATGATCCTTTCAGATGTTTAAGTGTTATTGTCCCTCTACTGGTTGCTGAGGATGAGAAAACTCTTGTTACTTGCATAAATTGCTTGACAAAGCTTGTGGGCCGGCTCTCGCAGGGGGAACTGATGGCTCAGTTACCCTCATTTCTGCCTGCTCTGTTTGAAGCTTTTGGAAACCAGAGTGCAGATGTCCGTAAGACTGTTGTTTTCTGTCTTGTTGATATTTATATCATGCTTGGGAAAGCATTCTTGCCATATTTGGAAGGGCTTAACAGCACACAGTTGAAATTGGTTCAGAGAGAAGAAAGTTTGTTGGTTTTTGGTGTTTTCTTATTTATAATTTGTGTATTTTCTACATTGTGTGCATATTTTTTA 4230 0.4161 MEEALELVRAKDAKERMAGVELLHQLLEASRRTLTSTEVTNLVHCCLDLLNDNSFRVSQGALQALASAAVLSAENFKLHLNALVPAVVDRLGDAKQPVSSPTIIVERAGSFAWTCKSWRVREEFARTVTSAIGLFSSTELTLQRLLNDPNPAVREAACLCTEEMYAQAGSQFRDELQRHNLPSSLVNDINARLEGIQPKVRSSDGSGYNSGEIKPLNVNPKKSSPKAKSSSRESSLFGGDGNVTEKPIDHIKVYSEKELIREIDKIVYTLVPEKDWSIRIAAMQRIEGLVLGGAADFSCFHGLLKQLVGPLSMQLSDRRSTIVKQACHLLCLLSKDLMGDFEACAEMFIPVLLKLVVITVLVIAESADNCIKTMLCNCKVARVLPRIADCAKNDRNAVLRARCCDYALLMLENWPDAPEIQRSVDLYEDMIRCCVSDAMSEVRSTARMCYRMFAKTWPERSRRLFSFFDPAIQRLINEEDGGIHRRHVSPSIHDRSTPMSLTSQASAPSNLPGYGTSAIVAMNRNSSLSSGTSISSSVFLSQAKSHDKGIERSLESVLHASKQKVTAIESMLRGLNMSDKHNLAALRSSSLDLGVDPPSSRDPPFPAVVPASNHLTSSSMTESTASVVNKGINQNGGLGLSDIITQIQSSKDSGKLSYHSDVGIQSLSALSSYSSKRGTERLQERSSVDENIDIKEAGRYMNRNTNRHFIDTPYRDDNFRDFQNNYVPNFQRPLLRKNVAGRMPAGRRSFDDSHLSLVSNYVEGPASLHESLCEGLSSGSNWSARQGQKGIQEVLQNFEKVMKLFFQHLDDPHHKIAQAALSTLADIILACRKPFEGYMERMLPHVFSRLIDPKELVRQACSATLEVVSKTYSIDSLLPALLRSLDEQRSPKAKLAVIEFAISSFKKHAMNPEGAANIGILKLWLVKLTPLVHDKNTKLKEAAITCIISVYSHFDSTAVLNFILSLSVEEQNSLRRALKQRTPRIEVELMNYLQNKKERQRKSSYDPSDVVGSSSDDGYVGFYRKTHYLGRYSAGSLDSDGGKKWTSHDSTMIKAITGLAASDETQEHSYQNPEIDSNSGILDSKSKDLTSTFNMAQNFGFETSQVGHVDNSINLEGLSSHLDANGLMSLEHLNISDGFENDKDHLSDWNHNNHSAEEVTVNSMTDTGPSIVQILHMICSGGDGSLVSNKKTALQQLVEASIVNDRAVWTQYFNQILTAILEVLDDPDSSIRELTLSLIVEMLKNQKYAMENSVEVVIEKLLNVTKDIVPKVSNEAEHCLTIILSHDDPFRCLSVIVPLLVAEDEKTLVTCINCLTKLVGRLSQGELMAQLPSFLPALFEAFGNQSADVRKTVVFCLVDIYIMLGKAFLPYLEGLNSTQLKLVQREESLLVFGVFLFIICVFSTLCAYFL 1410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g1074 1410 MobiDBLite consensus disorder prediction 202 238 - -
Lal13g1074 1410 Pfam CLASP N terminal 262 476 IPR024395 -
Lal13g1074 1410 Pfam HEAT repeat 142 160 IPR000357 GO:0005515
Lal13g1074 1410 MobiDBLite consensus disorder prediction 493 509 - -
Lal13g1074 1410 Gene3D - 770 982 IPR011989 -
Lal13g1074 1410 SUPERFAMILY ARM repeat 3 1386 IPR016024 -
Lal13g1074 1410 Gene3D - 1185 1387 IPR011989 -
Lal13g1074 1410 MobiDBLite consensus disorder prediction 485 509 - -
Lal13g1074 1410 MobiDBLite consensus disorder prediction 200 241 - -
Lal13g1074 1410 Gene3D - 242 482 IPR011989 -
Lal13g1074 1410 PANTHER PROTEIN, PUTATIVE-RELATED 28 1383 - -
Lal13g1074 1410 Gene3D - 1 199 IPR011989 -
Lal13g1074 1410 PANTHER CLASP 28 1383 - -
Lal13g1074 1410 SMART TOG_3 252 489 IPR034085 -
Lal13g1074 1410 SMART TOG_3 760 991 IPR034085 -
Lal13g1074 1410 SMART TOG_3 1158 1395 IPR034085 -
Lal13g1074 1410 SMART TOG_3 3 202 IPR034085 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g1074 Lal-Chr13 8028663 8053210 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal13g1074 K16578 - gmx:100796697 2133.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal13g1074 13 8028663 8053210 Lal13g1074 13 8028663 8053210 ECH
Lal11g1107 11 14800761 14817711 Lal13g1074 13 8028663 8053210 PCT
Lal20g0045 20 324953 341319 Lal13g1074 13 8028663 8053210 PCT
Lal13g1074 13 8028663 8053210 Lal11g1107 11 14800761 14817711 PCT
Lal13g1074 13 8028663 8053210 Lal20g0045 20 324953 341319 PCT