Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g1921 ATGGCTGATATTTCCAATGCTGATTCTAAAAGAATGTATTCATGGTGGTGGGACAGTCACATAAGCCCCAAGAACTCAAAATGGCTCCAAGAGAATCTCACAGATATGGATGCAAAGGTGAAACAAATGATTAAGCTTATTGAAGAAGATGCAGATTCCTTTGCAAGGAGAGCAGAAATGTATTATAAGAAACGGCCAGAGCTTATGAAATTGGTGGAAGAGTTTTACCGCGCGTACCGAGCATTGGCCGAGAGATATGATCATGCGACCGGAGTGATTCGGCAAGCTCATCATACCATGGCTGAAGCATTTCCTAATCAAGTCCCTCCCGTACTCACAGATGATTTACGAACCGAGCCGCATACACCAGAAACACAAAAGGATGCTTCTAATCATCTATATGCTATAAAAAGAAACGGAGCTTATACGGATGAACATGATTCTGATATAAGCAGAAAGGGTCTAAAACAGGTCAATGATCTCTTCATATCAGGAGAACCTAGGAGAACAAAAGGGAGTGCTAGAAGAGGGCTCAATTTCCATGAGACAGATGAGATTATGAAAGACAATGGAAGCTATGATGATGCTAAGTCTCAAGTCTTATCCGAGTCTGAACGGTTGACTAAAGCTGAGGCAGAAATCTTGGCCTTAAAGAAAGCCCTTGAAAGATTGGAAACTGAAAAGGAAACCGGCTTGTTTCAATATCAGCAGAGTATGGAGAGATTGTCTAATCTGGAATCAGAAGTATCTCGTGCAAGAGAGAATTCCCGAGGACTTGATGAACGCATGATTAAAGCTGAAACCGAAGTTCAAACCTTGAAGGAAGCCCTTACAAAGCTACAGGCTGAAAAAGAAGCTAGTCTTGTTCAGTATCAGAAATGCTTGGAGAAACTGTCTAATCTGGAGAAAAATATCTCTTGTGCTCAAAAAGATGTTGGAGACCTTAATGAACATGCTTCTAGAGCTGAAACTGAAGCCGGATCTTTAAATAAAGACCTTTCTAGAGTAGAAGCTGAAAAAGAAGCGGCGCTTGTTCAATATAACCAGTCGTTGGAGAAAGTGTCCAAATTGGAGGAGGGATTAGCACATGCTGAGGAGAAAGCAAGGAGAATCAATGAACAAGCTGATGTAGCTAAAAATGAAATTGAGGCAATGAAGTTAGAAATTACTAAGCTTACTCAAGAGAATGAAGATGCAGCGGTTCGTCATCAGCAATGCTTGGAGATAATTTCTGGTTTGGAACATAAACTCTATTGCGCCGAAGAGGAGGTTCATAAGCTGAACTGCAAGATAGCTGACGGTGTTGAAAAATTGCAAAGTTCTGAACAGGAGTGTGATCTCTTGGAAACATCAAACCAAACACTGCAATCTGAATTTCAATCTCTGGCACAGAAGATGGGATCTCAAAGTGAAGAACTTACCGAGAAGAAGAAGGAATTAAGTAGACTTTGGACATGCATACAAGAGGAGCGATTGAGATTCATTGAGGCTGAAACTTCTTTCCAAACTCTTCAGAATTTGCATTCTCAATCACAAGAAGAGCTTAGATCACTTTCTTCTGAGCTTCATAATAAGGCTGAATTTCTGGAGAATATGGAATCATGCAAGAATTCTTTGGAGAAAGAAATACAAAGAGTCAAGAAGGGAAACAAAATTTTACATGAGCTAAGATTATCTTCGTCTTTGTCTATAGAAAATTTCCAGGACGAAATATTAAATCTGAGGGAGACAATAGAGGAACTCGAACACGAGGTTGGACTGCGAATCGATGAAAGAAACACTCTTCAGCAAGAAATGTACTTCCTTGAGGAGGAGCTTAATGATGTTAATAAAAGATATGAATCCATGATGGAGGAGGTTGGGTCAACCGGCTTAGATTCACAGTGCTTTGCCTCGTCTGTTAAGAAATTGCAAGATGAGAACTCAAAGCTGAAGGAGAAATGTGAGCTTGAGAAATGTGAGAAAGCAGCTCTTGTGGAAAAATTGGAGATCTTGCATACTCTTTTGGAGAAATCGATTTCTGATTTGAATACTGAGCTGGATAGTGTCAATGGAAAGGTGAAGGTATTGGAAGAATCTTGCAAATATTTGCTTGATGAGAAAGCCACTCTTGCTGCTGAAAAAGCCACCTTGTTTTCTCAGCTGCAAACTACAGCTAACAAGCTAGAGATGACCTCAGAGAAAAACAGCCATTTAGAAAATTCACTATTTGATGTAAATTCCGAGCTTGAAGGATTAAGGGTGAAGTCGAAGATATCAGAAGATAATTGCATGTTACTTGACCATGAGAAATCTAGCCTCACCTCTGAGAAAGAAACCTTGGTTTCACAATTAAAAATCACTCGTCAAACACTGAAAGATCTGGAGAAAAAACACTATGAGTTGGAACTAAAGCATTCGGAACTAAAAGTTGAAAAGGAATCTGCAATTCAAAAGGGGGAAGAGCTTCTGGTTTCCTTATATTCTGAGAGAGAAGAGAACTCCAGGATTGTGAAATTCAACGAAGGTTACTTCGTTGACAAGGAACTGCAAATTCATGTTCTACAAGAAAATGCAAGGCACCGTAAAAAGGAATATGAGGAGGAACTGGACCGAGCGGTACATACTGAAATGGAAATTTTCATCTTGCAGAAATGTATCCATGATTTGGAGCAAAAGAACTTAGCAGTTATAGTCGACTGTCAGAGACTGTTGGAGGCATCCAAAATGTCTGATAGATTGATATCTGAATTGGAGAATGAAAATGTACAAAAGCAGGTTACTATGAATTCAATGTCTGAGAAAAATAAAATACTAAGGATTGGGCTGCTTCAGGTGTTAAAGACTCTCGGCCTGAACAACGAGCATCTGTGTCATGATATGATTGAAGAAGATCAGGAGCTTCTGAACCATACACATGGCAAACTTCAGGTGACACAGAATCATTTTGTCAAAGTTTTCAATGAAAGAGAGAGAGCGACGATTGAGAATTCACTTCTTGTTACATTCCTTGGGCAGTTGAAATTAAATGCAGAAAATCTTGTGACAGAAAGAGATTCCCTTGATGCGGAGCTGAGGGTCCAGTCTAATCAGTTCTTTGCATTACAAGAAAAGGTCCAAAAGATATTAGAGAAGAATCAGGAATTGAAGTTGGCAATAACCAAAGGAGATGAGAAAATGAAAGTAATGAATACTGAAATTGAGAATCTACGCAAGCAGCTTTCAGACTTGGCAGTGGCTCATAAAAACACAGAAGAAGAAAGTTGCAAGACAGTTGAAGAGAAAAATTGCTTGACGAGAAGATTTCTAGATCTAGGTGAAGAGAAAAGCAAGTTGGAAGAAGAAGTCTGCCTCATGATTCATGAGATAATAGTTCAATCAAATCTGTCTCTAATCTCGCAGGAAGTTCTATTTGAAAAACTCGTAGCACTTGAGAAGCTAAGCAATGATCTTGATAAATTATGTTTGGTAAATATCAAACTTGAGGAGAGATTAAAAATAATGGTGAGCAAACTAGAAGATGGACAAGTAGAAAATTCGCATCTTAAAGAATCATTTATTGTGTCGAATGTTGAACTGAAGTTACTTGAATCTGTCAATGATCAACTAAATTGTCAGATTACAAATGGAAAGGAGTTGTTGTCTGAAAAGGAGAATAAGATTTTGGAAGCAGCAGAGATGTTTAGTGCTTTATTCGATGAGAAAACAGAATTGCAAAGATTGGTGGAAGATCTGAGGAGTAAGTATGATGAAGCCAGGGTGATACTTGCAGACCAAGATACTCAAATTTTAAAATTATCGTCAGACAAGGATCATCAAAATGAAAAGCTCGCATGCCTTTATGAAGTGAACCAAAAGTTAGAGGCTGAAATGCAGCACCTGTGTCAAGAACTTGGAGAAACTAAGCTGAGGGAAGAGAAGCTAAGCAGTGAACTACAAAATGGAGCAAATGAGATTGAACAATTGGAGACTCAGGCTGATACGCTCTATGCCAGTCTGCAGATTTCTGCGGTGAATGAGACATTATTTGAAGGGAAGGCTTGCGAGCTAGACGATGCTTGCAAAAATCTTGAACTCAGAAGCGATGCCAAAGATATGTATAGTGAAAATATGAAAGAAAGAGTTATGAAACTGGAAGGTGAAAACAGAAGATTACATGGTCAGTTGGCTGCATATGTCCCTGCTGCCAGTGCTTTGAATGATTGTATAACATCCCTGGAGATGCAGATTGTTGTTCATGCAAATCCTCATGACTACAAAGAATCAAAGGCTACAATTTTGGCAAATACCCAATACACTGAAGGTGGTCCACAAACAAGTGAAGATCAGAATTCTACAGCACCAGATGCTCTTCCAAACTTCCAAAACATGTGGAAAAGGATCAATGCAATTGAAATGGCTGTTGAACAGATGAGTGAAAGTTCCAAACCTAAGGATGAAATGAGAGAGATTCAAGTATTAAAATCTGGGACCAGTCAAAGAAATATTCAAGTAAGTAAGCATGTTACTCAAATGGGTGAAGCAAAGGTGCATCAAGGTAGACCTTCTGCTGAACTGAAACCAAAAGACATTATGCTTGATCAAATGTCAGAATGTTCATCATATGGTGTAAGTATGAGAGGAATTCTCGAGTCTGATGATCGGATACTTGAATTGTGGGAAACTGCGGATAAGGATGGAAGTATTGGCCTCAAAGTTGGCAAGACACATACACAGAAAACAGCTACTGCATATGGTAGCTACCATGTTGAAAAGGAGAAGTTGAGCGTGGACAAACTAGTGATCCCAAGAAGATTGACAATACAGACACATCACGAGGAAGATGGCAACAAGAGAAAGGTTTTAGAAAGACTTGATTATGATGCACAGAAGTTGACAAACCTTGAAATTACAGTCCAAGATTTGATGAACAAAGTGGACATTAGTGAGGAGAGCAGCACAATGAGAAAAGGCATTGAGTATGATAGTGTGAAAGATGAGCTTGAAGCTGCTAAGGAGACCATCATGAAGTTGTTTGACACGAACCGCAAGTTGACGAGGAAAGTAGAGTCGGCAACAGATTCAGATGAAAATGGGAGCATGAGCAGAAGGAGAATTCCGGAACAGGCTCAGAGAGGGTCTGAAAAAATAAGAAGGCTGCAGTTGGAGGTGCAAAGACTGCAATTTTTGCTTATGAAATTGAATGATGAAAGAAAAGGCAAAGGAAAAACAATGGTTGATGATCAAAATTCAAGCGTCCTTTTGCGAGATTATCTATATGAAGGGACAAGAGTTAGCTACCAGAAGAGGAAGAAGAAGAAGAAAGGACACTTTTGTGCATGCATGCAACCTCCCACTAAGGGAGATTGA 5328 0.3932 MADISNADSKRMYSWWWDSHISPKNSKWLQENLTDMDAKVKQMIKLIEEDADSFARRAEMYYKKRPELMKLVEEFYRAYRALAERYDHATGVIRQAHHTMAEAFPNQVPPVLTDDLRTEPHTPETQKDASNHLYAIKRNGAYTDEHDSDISRKGLKQVNDLFISGEPRRTKGSARRGLNFHETDEIMKDNGSYDDAKSQVLSESERLTKAEAEILALKKALERLETEKETGLFQYQQSMERLSNLESEVSRARENSRGLDERMIKAETEVQTLKEALTKLQAEKEASLVQYQKCLEKLSNLEKNISCAQKDVGDLNEHASRAETEAGSLNKDLSRVEAEKEAALVQYNQSLEKVSKLEEGLAHAEEKARRINEQADVAKNEIEAMKLEITKLTQENEDAAVRHQQCLEIISGLEHKLYCAEEEVHKLNCKIADGVEKLQSSEQECDLLETSNQTLQSEFQSLAQKMGSQSEELTEKKKELSRLWTCIQEERLRFIEAETSFQTLQNLHSQSQEELRSLSSELHNKAEFLENMESCKNSLEKEIQRVKKGNKILHELRLSSSLSIENFQDEILNLRETIEELEHEVGLRIDERNTLQQEMYFLEEELNDVNKRYESMMEEVGSTGLDSQCFASSVKKLQDENSKLKEKCELEKCEKAALVEKLEILHTLLEKSISDLNTELDSVNGKVKVLEESCKYLLDEKATLAAEKATLFSQLQTTANKLEMTSEKNSHLENSLFDVNSELEGLRVKSKISEDNCMLLDHEKSSLTSEKETLVSQLKITRQTLKDLEKKHYELELKHSELKVEKESAIQKGEELLVSLYSEREENSRIVKFNEGYFVDKELQIHVLQENARHRKKEYEEELDRAVHTEMEIFILQKCIHDLEQKNLAVIVDCQRLLEASKMSDRLISELENENVQKQVTMNSMSEKNKILRIGLLQVLKTLGLNNEHLCHDMIEEDQELLNHTHGKLQVTQNHFVKVFNERERATIENSLLVTFLGQLKLNAENLVTERDSLDAELRVQSNQFFALQEKVQKILEKNQELKLAITKGDEKMKVMNTEIENLRKQLSDLAVAHKNTEEESCKTVEEKNCLTRRFLDLGEEKSKLEEEVCLMIHEIIVQSNLSLISQEVLFEKLVALEKLSNDLDKLCLVNIKLEERLKIMVSKLEDGQVENSHLKESFIVSNVELKLLESVNDQLNCQITNGKELLSEKENKILEAAEMFSALFDEKTELQRLVEDLRSKYDEARVILADQDTQILKLSSDKDHQNEKLACLYEVNQKLEAEMQHLCQELGETKLREEKLSSELQNGANEIEQLETQADTLYASLQISAVNETLFEGKACELDDACKNLELRSDAKDMYSENMKERVMKLEGENRRLHGQLAAYVPAASALNDCITSLEMQIVVHANPHDYKESKATILANTQYTEGGPQTSEDQNSTAPDALPNFQNMWKRINAIEMAVEQMSESSKPKDEMREIQVLKSGTSQRNIQVSKHVTQMGEAKVHQGRPSAELKPKDIMLDQMSECSSYGVSMRGILESDDRILELWETADKDGSIGLKVGKTHTQKTATAYGSYHVEKEKLSVDKLVIPRRLTIQTHHEEDGNKRKVLERLDYDAQKLTNLEITVQDLMNKVDISEESSTMRKGIEYDSVKDELEAAKETIMKLFDTNRKLTRKVESATDSDENGSMSRRRIPEQAQRGSEKIRRLQLEVQRLQFLLMKLNDERKGKGKTMVDDQNSSVLLRDYLYEGTRVSYQKRKKKKKGHFCACMQPPTKGD 1775
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g1921 1775 Coils Coil 463 483 - -
Lal1g1921 1775 Coils Coil 997 1024 - -
Lal1g1921 1775 Coils Coil 1618 1638 - -
Lal1g1921 1775 Gene3D - 205 370 - -
Lal1g1921 1775 PANTHER PROTEIN NETWORKED 4A 1 1775 - -
Lal1g1921 1775 Coils Coil 1703 1723 - -
Lal1g1921 1775 Coils Coil 529 549 - -
Lal1g1921 1775 Coils Coil 634 654 - -
Lal1g1921 1775 Coils Coil 1046 1080 - -
Lal1g1921 1775 Coils Coil 564 619 - -
Lal1g1921 1775 Coils Coil 1088 1108 - -
Lal1g1921 1775 Coils Coil 1263 1325 - -
Lal1g1921 1775 Coils Coil 659 693 - -
Lal1g1921 1775 Coils Coil 771 805 - -
Lal1g1921 1775 MobiDBLite consensus disorder prediction 1673 1701 - -
Lal1g1921 1775 Coils Coil 1228 1248 - -
Lal1g1921 1775 Coils Coil 438 458 - -
Lal1g1921 1775 Coils Coil 1361 1381 - -
Lal1g1921 1775 Coils Coil 193 227 - -
Lal1g1921 1775 Coils Coil 235 339 - -
Lal1g1921 1775 Coils Coil 347 402 - -
Lal1g1921 1775 SUPERFAMILY Tropomyosin 377 623 - -
Lal1g1921 1775 Coils Coil 501 521 - -
Lal1g1921 1775 SUPERFAMILY Myosin rod fragments 669 778 - -
Lal1g1921 1775 Coils Coil 1647 1674 - -
Lal1g1921 1775 Coils Coil 1193 1213 - -
Lal1g1921 1775 Pfam KIP1-like protein 14 87 IPR011684 GO:0003779
Lal1g1921 1775 Coils Coil 1137 1157 - -
Lal1g1921 1775 Coils Coil 908 928 - -
Lal1g1921 1775 PANTHER KINASE INTERACTING (KIP1-LIKE) FAMILY PROTEIN 1 1775 - -
Lal1g1921 1775 Coils Coil 849 869 - -
Lal1g1921 1775 ProSiteProfiles Networked (NET) actin-binding (NAB) domain profile. 13 93 IPR011684 GO:0003779
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g1921 Lal-Chr1 21425953 21433454 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g1921 - - gmx:100810726 2354.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g1921 1 21425953 21433454 Lal1g1921 1 21425953 21433454 ECH
Lal1g1921 1 21425953 21433454 Lal12g0195 12 1403485 1412315 PCT
Lal1g1921 1 21425953 21433454 Lal13g0168 13 1057376 1065825 PCT
Lal1g1921 1 21425953 21433454 Lal24g0147 24 1090585 1097160 PCT
Lal12g0195 12 1403485 1412315 Lal1g1921 1 21425953 21433454 PCT
Lal13g0168 13 1057376 1065825 Lal1g1921 1 21425953 21433454 PCT
Lal24g0147 24 1090585 1097160 Lal1g1921 1 21425953 21433454 PCT