Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g0168 ATGGCGGCGACTTTGTCTAAAAAAAATTCTAATAGAATGTATTCATGGTGGTGGGACAGCCATATAAGTCCCAAGAATTCCAAATGGCTCCAGGAAAATCTAACTGATATGGATTCCAAGGTGAAGCAAATGATTAAGCTTATTGAAGAAGATGCAGATTCCTTTGCCAGGAGAGCAGAAATGTATTTTAAAAAACGCCCAGAGCTTATGAAAATGGTTGAAGAGTTTTACCGGGCATACCGGGCATTGGCTGAGAGATATGATCATGCAACTGCAGTGATCCGTCATGCCCACCGGACCATGTCTGAAGCATTTCCTAATCAAATCCCCATGATGGATGAGAATGAGGCCGAGCCACATACTCCAGATGCACGCCACCCGTCACGTGCATTTCTCGAAACAGATGAACTGCCGAAGGATGCTTCTACTCATTTCCCTTCCATGAAAAGAAATGAAGCTCATACTGAAGGACCTTATTCTGCTATAAACAAGACTGGTTTGAAACAGCTCAATGATCTTGTCATTCCCGGAGAACAAGTAAATGTTGTGAAGTTTGCTGGAGGGCATGCTAGAAGGGGGCTCAATTTTCTTGGCACACAGGAGGAGAGTAATGGGATAAACAGTGAAAGCCATAATAGCAGGACTGAAGTCTTGTCTGAGTCTGAACGGGTGAAAAAAGCTGAGACACAAATTATGGCCTTAAAGGAAGCCCTTGCTAAATTAGAAAGTGAAAAAGAAGATGGTTTGCTTCAGTATCAGCAGAGTTTGGAGAGATTGTCTAATCTGGAGTCAGAAGCGTCTCATGCACGAGAGAAATATCAAGGGCTTGATGATAGAGCAAGTAAAGCTGAAGCTGAAGTTATAGTCTTGAAGGAATCCCTCACCAGATTACAGGCTGAAAGGGAAGCTAGTCTAAATCAGTATCAGCAATGTTTGGATAAAATATCTAACCTGGAGAAAAATATTTCTTTTGCTCAAAAGGATGCAGGAGAACTTAATGAACGAGCTACTATAGCTGAAACTGAATCTGGGTCACTAAAACAGGCTCTTACTAGAGTTGAAGCTGAAAGGGATGCTGTCCTTGTTAAATATAAACAGTGCTTGGAGTCATTATCAAAACTGGAGGAGAGATTAAAAGAAGCAGAGGATAATGCGAGAAGGATTAGTGAGCAAGCTAATAAAGCTGAGAATGATATTGAGGCGCTGAAGTTAGAAGTTGCTAAACTTACAGAAGAGAAGGAAGATGCAGCTCTCCATTATCAACAATGCTTGGAGATAATTTCCAGTTTGGAGCATACAATCTCTTGTCATGAAGAGGAGGTGCGTAGGCTAAATTCCAAGGTAGATGATGGGGCTGAAAATTTGCATAGTTATGAACAAAAGTGTCTTATATTGGAAACATCAAATCACACTCTGCAGTCTGAATTGCAGTCTTTAGCTCAAAAGTTGGGGTCTCAAAGCGAAGAACTTAGTGAGAAGCGGAGGGAATTGAGTACACTTTGGACTTCCTTACAAGAGGAGAGATTGCGATTCATTGAGGCCGAAACTGCTTTCCAAACTCTTCAGCATTTGCACTCACAATCTCAGGAAGAACTTAGATCTCTTGCTGCTGACCTTCATGGTAAGGAAGAGATCCTGGAGAGCATGGAATCCTGTAACCACGCTTTAGAGGATAAACTAAACAAAGTGAAGGAGGAAAACAAAATTCTAAATGAGCACAAGATTTCTTCATCTATGTCCATAAATATTTTGCAAGATGAGATATTAAACCTGAGGGAGATAATAGAGAAACTTGAACAGGAGGTTGAGCTGCGAGTTGATGAAAGAAATGCTCTTCAGCAAGAAATATACTGTCTCAAAGAGGAGCTTAATGATCTGAATAAAAGATATGAAGCTATGATAGAGGAGGTCAGGTCAACTGGCTTAGACCCACAGTACTTTGGCTCATCTGTGAAACAAATGCAAGATATGAACTCAAAGCTGAAGGAGACGTGTGAGGCTGACAAAGGTGTAAAAGCATCTCTTCTGGAAAAATTGGAGATCATGGAGAAACTTTTGGAGAAAAATTCTGTTTTGGAGAATACTCTTTCAGACTTGAATGCTGAGATGGAGAGTATGAGAAGAAAGGTAAACGTGTTGGAAGAGACATCCCGATCTCTGCTTGAGGAAAAATCAACTCTTGCTGCTGAGAAGGCCACTTTGTTTTCTCAGTTACAAGACACAGTTGAAAAGTTGGAGAAGCTCTCAGTAAAGAACAAACTTTTGGAAAATTCACTTTTTGACGTGAATGCTAAACTCGAAGGATTAATGGTAAAGTCCAAGATCTTAGAAGACACGTGCCAGTTAATTGGTGATGAGAAGTCCAGTATCATCTCTGAGAAAGAAAACTTAGTTTCACAGTTGAACATCACTCAGCAAACACTGATAGATCTTGAGAAACAACACAGTGAATTGGAACTGCAGCATTTGGAACTAAAAGGAGAAAGGGAGTCTGCACTTCTAAAGGTAGAGGAGCTACTGGTTTTGTTATATTATGAGAAGGAGGAACATGCCAGAGTTATGAAATTGAATGAAGATGACTCGGCTGAGAAGGAATTACGAATTCATGCTCTACAAAAAGATGTGAATTGCCAGAAAAGGGAATACGGGAAGGAACTTGACAGAGCTCTACACGCTCAAACTGAAATTTTCATCTTGCAGAAATGTATCCAGGATTTGGAGGAAAATAACTTCTCCCTTCTAGTTGAATGTCAGAGACTTATGGAGGCATCTATAATGTCTGAGAGAATGATATCTAGATTGGAGATTGAAAATGTTCAAAAGCAGGTTGATGTGAATTCTTTATCTGAGAAAACTAAAATACTAAGAATTGGGCTGCTTCAGGTGTTGAAGACTCTTGACATTAACAGCGAGCATTTGTGTGAAGATAAGCTTGAAGAAGACCAGATGCTTCTGAACCATATACATGGAAAACTTCAGGAGACACAGAAGTCCTTTGTCTCAACTTTCAACGAAAACCAGCAGCTGATAGTTGAGAATTCAGTTCTGGTAACATTCCTTGGCCAGTTGAAACTAAAGGTGGAAACTGTTGTGTCAGAAAGAGATGTCCTTGATGAGGAGTTCAGGATACAGTCTAAGCAGCTTTTGGCATTGCAAATAGAGGTCCAAAGGATATTGGAGAAGAACCGGGAGTTGAAGTTGACAATATCAAAGGGAGAAGAGAGAACGGAAGTAATGACAACTGAAATAGAGAATCTAGGCAAACAGCTGTCAGACTTGGAAGAGGGTTACAAAAGCTTACAGGAAGAAAGTTGCAAGACACTTGAAGAGAAGAAGTCCTTGATGAAAAGAGTTGTTGATCTGGGTGAAGAGAAAATTAACTTGGAAGAAGAAATTTCTGTTGTAATCCACGAGACAATAGCTCAATCTAGTATTTCTCTGATTTACCAGAACATCGTCTTTGAAAAACTCCTGGAACTTAAAGAGTTGGGTGAAGGTCTCGATAAATTTCGAACGATGAATAATGACCTTGAGGGGAGATTAAAAATAATGGCATGCAAATTAGAAGAAGCAGAGATGGAAAACTCAAATCTTAAAGAGTCATTTGTAAAATCGAATATTGAACTAAAGTTAGTTGAATCTGTCAACGATCAATTAAGTTGTCAGATCAGGACTGAAAAGGAATTACTATCTCAAAAGGAAATTGAGCTTTTGGAAGCAGCTAAGATGGTTTGTACTTTACAGTCTGAGAAAACAGAATTGCGAAGAGTGGTGGAAGATCTGAAGGTTAAGTATGATGAGGCCAGGGTGGTACTTGAAGACAAGGGTAATCAAATTTTAAAGTTATCCTCAGACAAGGATCATCAAAATGAAGAGCTTCGATGTCTTCGTGAAGTGGATCAGAAGCTGGAGTCTGAAATGAGGCACCTACATCAAGAACATAAAGAAACTAAACTGAGGGAAAAGGAGCTAAGTTATGAGCTGCATAAGGGAAAATATAAGATTGAAGAATGGGAAACTCAGGCTGCAACACTTTATGCCGAACTGCAGATTTCTGCTGTCAATCAAACATTATTTGAAGGGAAGGTCTCTGAGCTAGCTGATGCGTGTGAGAATCTTGAAAGCCGGAACTACTCTAAAGATATAGAAAGTGAACTGCTGAACGAAAGAGTTACCAAGTTGGAAGGTGAAAATGAAAGACTATGTGGTCATTTAGCTGCTTATGTCCCGGCCATCAGTGCTTTGAATGATTGTATAACATCTTTGGAGATGCATACTCTTGTACATGCAAAATCTCATAAGTATGAAGAATCAAAGGTTCAAAATTTGGTGAATCACCAATCCACCGAAAGTGGTCGAGAAACAGGTAAAGATCAGACTGTTATGGCATCAGATGCCCTCCTGGACTTCGAAGACATGCAGAGAAGGTTAAGTGTAATTGAAATGATAGTTAAGCAGATAAATGGAAGTTTTGTACCCAAGGATGAAATAAGAGAGGAAACGGAGAACCAGCATGGACCTACTAATGGGATTGAAGTTCTGCCAAAAGATATCATGCTTGATCAAATATCTGAAAGTTCTTCATATGGGATAAGCAGAAGAGGAACACTTGAGGCTGATGATAAGATGCTTGAGTTATGGGAAACCACTGATAAGGATGGCATTATTGAATTTGACATGACACAGAGAGGAGCAACCAACGAGCGGAAGAATAAATATCTTTCATCAGAGTCCTTGGTGGAAAAGGAGTTAAGTGTGGACAAATTAGAGATCTCAAGAAGATTGTCTCAACCACATGAAGTGGGAAACAAGAGCAAAGTTTTAGAAAGACTTGATTCTGATGCACAAAAGCTAACAAACCTTCAAATAACCGTACAGGATTTGGTGAAGAAGGTGGAAATTATGGGAACTAGCAAAAAGGGAAAAGGTGTTGAGTACAATTCTGTGAAAGATCAGATTGAAGCTGCTCAGGAAACCATGACAAAGTTGTTTGATGGCAACCACAAGTTAAAGAAGAATGTGGAAGATAGTATCATGTCTTTTGACGAGAAGGCTGTGCTTGAGTCCGGGGATATTGGAAGTGTCAGCAGAAGGAGAGTAATGGAGCATGCGCGGAGAGGGTCGGAAAAAATAGGAAGGCTGCAGTTGGAGGTGCAAAGACTGCAGTTTCTGCTTCTGAAACTGGATGGTGGAAAAGAAAGCAAGGAAAAGACAAAAGTTGCTGATCATCGAAGTCCAAGAGTTCTTTTACGAGATTATCTCTACGGTGGGACTAGAACCAACAACAAGAAGAAGAGAGCACCCTTTTGTGCATGTGTGAAACCTCTCACCCAGAGAGATTGA 5343 0.4007 MAATLSKKNSNRMYSWWWDSHISPKNSKWLQENLTDMDSKVKQMIKLIEEDADSFARRAEMYFKKRPELMKMVEEFYRAYRALAERYDHATAVIRHAHRTMSEAFPNQIPMMDENEAEPHTPDARHPSRAFLETDELPKDASTHFPSMKRNEAHTEGPYSAINKTGLKQLNDLVIPGEQVNVVKFAGGHARRGLNFLGTQEESNGINSESHNSRTEVLSESERVKKAETQIMALKEALAKLESEKEDGLLQYQQSLERLSNLESEASHAREKYQGLDDRASKAEAEVIVLKESLTRLQAEREASLNQYQQCLDKISNLEKNISFAQKDAGELNERATIAETESGSLKQALTRVEAERDAVLVKYKQCLESLSKLEERLKEAEDNARRISEQANKAENDIEALKLEVAKLTEEKEDAALHYQQCLEIISSLEHTISCHEEEVRRLNSKVDDGAENLHSYEQKCLILETSNHTLQSELQSLAQKLGSQSEELSEKRRELSTLWTSLQEERLRFIEAETAFQTLQHLHSQSQEELRSLAADLHGKEEILESMESCNHALEDKLNKVKEENKILNEHKISSSMSINILQDEILNLREIIEKLEQEVELRVDERNALQQEIYCLKEELNDLNKRYEAMIEEVRSTGLDPQYFGSSVKQMQDMNSKLKETCEADKGVKASLLEKLEIMEKLLEKNSVLENTLSDLNAEMESMRRKVNVLEETSRSLLEEKSTLAAEKATLFSQLQDTVEKLEKLSVKNKLLENSLFDVNAKLEGLMVKSKILEDTCQLIGDEKSSIISEKENLVSQLNITQQTLIDLEKQHSELELQHLELKGERESALLKVEELLVLLYYEKEEHARVMKLNEDDSAEKELRIHALQKDVNCQKREYGKELDRALHAQTEIFILQKCIQDLEENNFSLLVECQRLMEASIMSERMISRLEIENVQKQVDVNSLSEKTKILRIGLLQVLKTLDINSEHLCEDKLEEDQMLLNHIHGKLQETQKSFVSTFNENQQLIVENSVLVTFLGQLKLKVETVVSERDVLDEEFRIQSKQLLALQIEVQRILEKNRELKLTISKGEERTEVMTTEIENLGKQLSDLEEGYKSLQEESCKTLEEKKSLMKRVVDLGEEKINLEEEISVVIHETIAQSSISLIYQNIVFEKLLELKELGEGLDKFRTMNNDLEGRLKIMACKLEEAEMENSNLKESFVKSNIELKLVESVNDQLSCQIRTEKELLSQKEIELLEAAKMVCTLQSEKTELRRVVEDLKVKYDEARVVLEDKGNQILKLSSDKDHQNEELRCLREVDQKLESEMRHLHQEHKETKLREKELSYELHKGKYKIEEWETQAATLYAELQISAVNQTLFEGKVSELADACENLESRNYSKDIESELLNERVTKLEGENERLCGHLAAYVPAISALNDCITSLEMHTLVHAKSHKYEESKVQNLVNHQSTESGRETGKDQTVMASDALLDFEDMQRRLSVIEMIVKQINGSFVPKDEIREETENQHGPTNGIEVLPKDIMLDQISESSSYGISRRGTLEADDKMLELWETTDKDGIIEFDMTQRGATNERKNKYLSSESLVEKELSVDKLEISRRLSQPHEVGNKSKVLERLDSDAQKLTNLQITVQDLVKKVEIMGTSKKGKGVEYNSVKDQIEAAQETMTKLFDGNHKLKKNVEDSIMSFDEKAVLESGDIGSVSRRRVMEHARRGSEKIGRLQLEVQRLQFLLLKLDGGKESKEKTKVADHRSPRVLLRDYLYGGTRTNNKKKRAPFCACVKPLTQRD 1780
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g0168 1780 Coils Coil 364 419 - -
Lal13g0168 1780 Coils Coil 1083 1103 - -
Lal13g0168 1780 Coils Coil 1216 1236 - -
Lal13g0168 1780 Coils Coil 931 951 - -
Lal13g0168 1780 Coils Coil 794 828 - -
Lal13g0168 1780 MobiDBLite consensus disorder prediction 201 221 - -
Lal13g0168 1780 ProSiteProfiles Networked (NET) actin-binding (NAB) domain profile. 14 94 IPR011684 GO:0003779
Lal13g0168 1780 PANTHER KINASE INTERACTING (KIP1-LIKE) FAMILY PROTEIN 3 1780 - -
Lal13g0168 1780 Coils Coil 581 640 - -
Lal13g0168 1780 PANTHER PROTEIN NETWORKED 4A 3 1780 - -
Lal13g0168 1780 Coils Coil 738 758 - -
Lal13g0168 1780 SUPERFAMILY Tropomyosin 199 414 - -
Lal13g0168 1780 Coils Coil 1174 1208 - -
Lal13g0168 1780 Coils Coil 1048 1068 - -
Lal13g0168 1780 Coils Coil 217 335 - -
Lal13g0168 1780 Coils Coil 1111 1131 - -
Lal13g0168 1780 Gene3D - 344 509 - -
Lal13g0168 1780 Pfam KIP1-like protein 15 88 IPR011684 GO:0003779
Lal13g0168 1780 Coils Coil 682 723 - -
Lal13g0168 1780 Coils Coil 903 923 - -
Lal13g0168 1780 Coils Coil 469 496 - -
Lal13g0168 1780 Coils Coil 427 461 - -
Lal13g0168 1780 SUPERFAMILY Tropomyosin 429 638 - -
Lal13g0168 1780 Coils Coil 546 573 - -
Lal13g0168 1780 Coils Coil 1286 1313 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g0168 Lal-Chr13 1057376 1065825 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal13g0168 - - lang:109335385 2969.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal13g0168 13 1057376 1065825 Lal13g0168 13 1057376 1065825 ECH
Lal12g0195 12 1403485 1412315 Lal13g0168 13 1057376 1065825 LSH
Lal13g0168 13 1057376 1065825 Lal24g0147 24 1090585 1097160 LSH
Lal1g1921 1 21425953 21433454 Lal13g0168 13 1057376 1065825 PCT
Lal13g0168 13 1057376 1065825 Lal1g1921 1 21425953 21433454 PCT