Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal12g0195 ATGGCGAGTTTGCCTAAGGCAAACTCTAAGAAAAAGTATTCATGGTGGTGGGACAGCCATATATGTCCCAAGAATTCCAAATGGCTCCAGGAAAATCTGACTGATATGGATTCCATGGTGAAGCAAATGATTAAGCTCATTGAAGAAGATGCAGATACTTTTGCCATAAGAGCAGAAATGTATTATAAAAAGCGCCCAGAGCTTATGGAATTGGTTGGAGAGTTTTACCGAGCATACCGGGCATTGGCTGAGAGATATGATCATGCAACTGGAGTGATCCGTCAAGCCCATCAGACCATGCCTGAAGCATTTCCTAATCAAATCCTTATGATAGATGAGACTGACGCTGAGCCACACACTCCAGATGCGTGCCACCTTTCAAGCACATTTCTCGAAACATATGAGCCACAGAATGATGCTCCTATTAATTTTCTTTCCTTGAAAAGAAACGGAGCTCATACTGAAGAACCTAATTCTGCTATAAACAAGATAGGGTTGAAACAGCTCAATGATCTTGTCCTTCCTGAAGAGCAAGTAAATGTTGCGAAGTTTGCTGTAGGGCATGCTAGAAGGGAGCTCAATCTTCTTGGCACACAGGAGGAGAGTAACGGGATAAACAATGAAAGCCATGATAGAAGGACTCAAGTCTTGTCTGAGTCTGACCGGGTGACAAAAGCTGTGACAGAAGTTATGGCCTTAAAGAAAGCCCTTGCTAAATTAGAAAGTGAAAAGGAAGCTGGCTTGCATCAGTATCAGCAGAGTTTGGAGAAATTGTCTAATCTGGAATCAGAAGTGTCTCGTGCACTAGAGAAGTCTCAAGGGCTTGATGAGCGAGCAAGTAAAGCTGAATCCGAAGCTCAAGTGTTGAAGGAGTCTCTCGCCAAATTACAAGCTGAAAGGGAAGCTAGTCTAAATCAGTATCAGGAATGCTTGGAGACAATTTCTAATCTGGAGAAAAATATTTATTTTGCTCAGAAGGATGCAGGAGAGCTTAATGAACGAGCTACTAGAGCTGAAACTGAAGCTGGGTCCCTAAAGCAGGATCTTGCTAGAGTAGAAGCTGAAAGGGATGTTGCCCTTGTTCAATATAAACAGTGCTTGGAGTCATTATCAAAACTGGAGGAGAGATCAAAAGAAGCAGAGGATAATGCAAGGAGGATTAATGAGCAAGCTGATAAGTCTGAGAATGAAATTGAGGCTCTGAAGTTCAAAGTTGCTAAACTTACAGAAGAGAAGGAAGATGCAGCTCTCCATTATCAACAGTGCTTGGAGATAATTTTCATTTTGGAGCATAAACTCTCTTGTGCTGAAGAGGAGGTGCGTAGGCTAAATTCCAAGGTAGAGGACGGGGCTGAAAAATTGCATAGTTCTGAACAAAAGTGTCTTCTATTGGAAACATCAAATCAAACTCTGCAGTCTGAATTGCAGTCTTTGGCACAAAAGTTGGGGTCTCAAAGCGAAGAACTTAGTGAAAAGCAGAGGGAGCTGGGAACACTTTGGGCTTCCTTACAAGAGGAGAGATTGCGGTTCATTACGGCTGAAACTGCTTTCCAAACTCTTCAGAATTTGCACTCACAATCTCAGGAAAACCTTAGATCTCTTGCTGCTGACCTTAATGGTAAGGCAGAAATACTGGAGAACGTGGAATCCCGTAAGCATGCTTTAGAGAATGAAGTGCATAGGGTGAAGGAGGAAAACAAAATTCTAAGTGAGCACAAGATTTCTTCCTCTTTGTCCATAAAAAATTTGCAGGATGAGATATTAAATCTAAGGGAAATGATAGAGAAACTTGAAAAGGAGGTTGAGCTGCGAGCTGACGAAAGAAATGCTCTTCAGCAAGAAATTTACTGTCTCAAAGAGGAGCTTATTGATCTGAATAAAAGACATGAGGCTATGTTAGAGGAGGTTGGGTCAACTGGTTTAGACCCGCAGTACTTTGGCTCATCTGTGAAACAATTGCAAGATGATAACTCAAATCTGAAGGAAACATGTGAGGCTATCAAAGGTGTGAAAGCATCACTTCTGGTGAAACTGGAGATCATGGAGAAAATTTTGGAGAAAAATTCTGTTTTGGAGAATTCTCTTTCAGACTTGAATGTTGAGATGGAGAGTGTCAGAGGAAAGGTAAAGGTGTTGGAAGAAACTTGCCAATCTCTGCTTGAGGAGAAATCAACTCTTGCTTCTGATAAGGACACTTTGTTTTCTCAGTTACAAGTTAAAACTGAAAAGTTGAAGAAACTCTCAGAAAAGAACAACCTTTTGGAAAATTCACTATCTGGTGTGAATGCTGAACTTGAAGGATTAAGGGTAAAGTCCAAGATCTTAGAAGATAGATGCCAGTTACTTGATGATGAGAAGTCCAGTATCATCTCTGAGAAAGAAACCTTAGTTTCTCAGTTGAACATCTGTCAGAAAACACTTGAAGATCTTGAGAAACAATGCAATGAATTGGAACTAAAGCATTTGGAACTAAAAGGAGAAAAGGAGTCTGCACTTCAAAAGGTAGAAGAGCTACTGGTTTTGTTATATTCTGAGAGGGAAGAACATAACAGAGTTATGAAATTGAATGAAGATGACTTAGCTGAGAAGGACTTAAGAATTCATACTCTAAAAGAAGATGTGAATTTCCAAAAAAAGGAACACGAGGAGGAACTGGACAGAGCTATACACGCTCAAACTGAAATTTTCATCTTGCAAAAATGTATGCAGGATTTGGCGGAAAATAACTTATCTCTTCTAGCTGAGCGTGAGAGACTTTTGGAGGCATCTAAAATGTCTGAGAAAATGATACTTAAATTGGAGACTGAAAATGTTCAAAAGCAGGTTGATGTGAATTCTTTGTCTGAGGAAATTAGAATACTAAGAATTGGGCTGCTTCAGATATTGAAGACTCTTGACATTAAGAACGAGCATTTGCGTGAAGATAAGCTTGAAGAAGACCAGATCCTTCTGAACCATATACATGGAAATCTTCAGGAGACACAGAAGTCGTTTGTCACAACTTCCAACAAAAACCAGCAACTGGCCATTGAGAATTCAGTTCTGGTAACATTCCTTGGGCAGTTGAAACCAAAGGTGGAAAATGTTGTGTCAGAAAGAGATGCTCATTATGAAGAGTTCAAGATCCAGTCTAAGCAGTTCTTGGCATTGCAAATAAAATTCCAGAAGATATTGGAGAAGAATCTGGAGCTGAAGTTGACAATAGGAAAGGGAGAAGAGAGAATGAAAGTAATGACAACTGAACTAGAGAATCTATGCAAAGAGATGTCAGACTTGGAAGAGAGTTACAAAAGCTTACAGAAAGAGAGATGCAAGACATTTGAAGAGACAAAGTCCTTGATGAAAAGATTTAATGGTCTGTGTGAAGAGAAAAGTATATTGGAAGAAGAAATTTGTTCTGTGATCCATGCTACATTAGCTCAATCTAATATTTCTCTGATTTACCAGAAAACCATATTTGAAAAGCTCCTGGAACTTAAAGAGCTAGGTGAAGATCTTGATAAACTTCAGTTTGTAAATAATGACCTCGAGGAGAGTTTAAAAATAACGGCACTCAAATTTGAAGACGCAGAAGTGGAAAGTTCACACCTTAAAGAGTCATTTGTCAAGTCGAACGTTGAACTAAAGTTAGCTGAATCTATCAATGATAAATTAAGTTCTCAAATTAGAACTGAAAAGGACTTATTGTCTCAAAAAGAAATTAAGCTTTTGGAGGCAGCCAACATGTTTTGTGATTTACAGACTGAGAAAACAGAATTGCAAAGAATGGTGGAAGAACTGAAGGTTAAGTATAATGAGGCCAGGGGGACACTTGAAGACCAAGCTAATCAAATTTTAAAATTATCCTCAGGTAAGGATCATAAAAATGAAGAACTCCAATGCCTTAGTGAAGTGAATCAGAAGCTGGAGTCTGAAATGAGGCATCTATATCAAGAGCTTGGAGAAACTAAACTGAGAGAAAAGGAGCTTAGTTATGAATTGCGTAAGGGAACAGATGAGATTGAACAATGGGAAACTCAGGCCGCAACACTTTATGCTGGACTGCAGATTTCTGCTGTCAATGAAACATTGTTTGAAGGGAAGGTCTCTGAGCTAGTTGATATGTGTGAGAATCTTGAATGCCAAAACTACACTAAAGATATGGAAAGTAAACTGCTCAAAGAAACAGTTAGCAAGTTGGAAGAAGAAAACGGAAGACTGCGTAGTCATTTAGCTGCTTATGTTCCGGCCATCAGTGCTTTGAATGATTGTATAACATCTCTGGAGATGCATACTCTTGTACATGCAGAACCTCATGAGCATGAAGAATCAAAGGTTCAAGATTTGGTGAATCACCAATGCAACGAAACTGGTATCCAAATTGGTGATGATCATACTTCAATGGCGCTAGATGCCCTCCTGGATTTCCAAGACATGAAGAGAAGAACAATTGCAATTGAAATGGCAGTTAAGCAGATAAATGGAAGTTTCAAACCCAAGGATGGAATAAAAGGGGCAAAGGATAACGAGCATGGACCCGGTAATGAGATTGGAGTTCTTCCGAAAGACATCATGCTAGATCAAATATCTGAATGCTCATCATATGGGATTAGCAAGAGAGGAACACTTGTGGATGATAATAAGATGCTTGAGTTGTGTGAAACCGCTGATGAGGCTGGCATTATTGAAGTTGACATGACACAGAATATGGCTCCAAGAGGAGCTAACAATAACAACCAAGCCTTAATCCCACAAGGCGAGGTCGGCTACATGGAGTGGAATAATAAATATCCCTCATCAGAATCCTTGGTGGAAAAGGAGTTGAGTGTGGACAAAGTAGAGATCTCAAGAAGATTGGCACAGCCACATGAAGAAGGAAACAGGAGTGAAGTTTTAGAAAGACTTGATTCTGATGCACAAAAGTTAACAAACCTTCAAATAACCATACAAGGTTTGATGAAGAAGGTGGAAATTATGGAGACGGGCAAGAAGGGAAAATCCGTTGAGTACAATTCTGTGAAAGATCAGCTTGAAGCTGCTCAGAAAACCATCACAAAGTTGTTGGAAGCCAACCACAAGTTAAAGAAGAACGTGGAAGACAGTAGCATGTCTTTTGGCGAGAGGACTGTGGTTGAGTCCGGTGAGATTCGAAGTGTTAGCAAGAGAGTAACAGAATATGCACGGAGAGGATCGGAAAAAATAGGACAGCTGCAGTTAGAGGTGCAAAGATTGCAGTTTCTGCTTCTGAAACTGAGTGGTGGAAAAGAAAGCAAAGAAAAGGCAAAAGTTGCTGACCATCCAAGTCCAACAGTTCTTTTGCGAGATTATCTCTATGGTGGGACTAGAACCAACAACCAAAAAAGGAAGAAAACATCTGGTTTATTCGCATGTGTGAAAACTCTCACCAAGGGAGATTGA 5397 0.3989 MASLPKANSKKKYSWWWDSHICPKNSKWLQENLTDMDSMVKQMIKLIEEDADTFAIRAEMYYKKRPELMELVGEFYRAYRALAERYDHATGVIRQAHQTMPEAFPNQILMIDETDAEPHTPDACHLSSTFLETYEPQNDAPINFLSLKRNGAHTEEPNSAINKIGLKQLNDLVLPEEQVNVAKFAVGHARRELNLLGTQEESNGINNESHDRRTQVLSESDRVTKAVTEVMALKKALAKLESEKEAGLHQYQQSLEKLSNLESEVSRALEKSQGLDERASKAESEAQVLKESLAKLQAEREASLNQYQECLETISNLEKNIYFAQKDAGELNERATRAETEAGSLKQDLARVEAERDVALVQYKQCLESLSKLEERSKEAEDNARRINEQADKSENEIEALKFKVAKLTEEKEDAALHYQQCLEIIFILEHKLSCAEEEVRRLNSKVEDGAEKLHSSEQKCLLLETSNQTLQSELQSLAQKLGSQSEELSEKQRELGTLWASLQEERLRFITAETAFQTLQNLHSQSQENLRSLAADLNGKAEILENVESRKHALENEVHRVKEENKILSEHKISSSLSIKNLQDEILNLREMIEKLEKEVELRADERNALQQEIYCLKEELIDLNKRHEAMLEEVGSTGLDPQYFGSSVKQLQDDNSNLKETCEAIKGVKASLLVKLEIMEKILEKNSVLENSLSDLNVEMESVRGKVKVLEETCQSLLEEKSTLASDKDTLFSQLQVKTEKLKKLSEKNNLLENSLSGVNAELEGLRVKSKILEDRCQLLDDEKSSIISEKETLVSQLNICQKTLEDLEKQCNELELKHLELKGEKESALQKVEELLVLLYSEREEHNRVMKLNEDDLAEKDLRIHTLKEDVNFQKKEHEEELDRAIHAQTEIFILQKCMQDLAENNLSLLAERERLLEASKMSEKMILKLETENVQKQVDVNSLSEEIRILRIGLLQILKTLDIKNEHLREDKLEEDQILLNHIHGNLQETQKSFVTTSNKNQQLAIENSVLVTFLGQLKPKVENVVSERDAHYEEFKIQSKQFLALQIKFQKILEKNLELKLTIGKGEERMKVMTTELENLCKEMSDLEESYKSLQKERCKTFEETKSLMKRFNGLCEEKSILEEEICSVIHATLAQSNISLIYQKTIFEKLLELKELGEDLDKLQFVNNDLEESLKITALKFEDAEVESSHLKESFVKSNVELKLAESINDKLSSQIRTEKDLLSQKEIKLLEAANMFCDLQTEKTELQRMVEELKVKYNEARGTLEDQANQILKLSSGKDHKNEELQCLSEVNQKLESEMRHLYQELGETKLREKELSYELRKGTDEIEQWETQAATLYAGLQISAVNETLFEGKVSELVDMCENLECQNYTKDMESKLLKETVSKLEEENGRLRSHLAAYVPAISALNDCITSLEMHTLVHAEPHEHEESKVQDLVNHQCNETGIQIGDDHTSMALDALLDFQDMKRRTIAIEMAVKQINGSFKPKDGIKGAKDNEHGPGNEIGVLPKDIMLDQISECSSYGISKRGTLVDDNKMLELCETADEAGIIEVDMTQNMAPRGANNNNQALIPQGEVGYMEWNNKYPSSESLVEKELSVDKVEISRRLAQPHEEGNRSEVLERLDSDAQKLTNLQITIQGLMKKVEIMETGKKGKSVEYNSVKDQLEAAQKTITKLLEANHKLKKNVEDSSMSFGERTVVESGEIRSVSKRVTEYARRGSEKIGQLQLEVQRLQFLLLKLSGGKESKEKAKVADHPSPTVLLRDYLYGGTRTNNQKRKKTSGLFACVKTLTKGD 1798
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal12g0195 1798 ProSiteProfiles Networked (NET) actin-binding (NAB) domain profile. 13 93 IPR011684 GO:0003779
Lal12g0195 1798 Coils Coil 538 572 - -
Lal12g0195 1798 Coils Coil 902 922 - -
Lal12g0195 1798 Coils Coil 363 411 - -
Lal12g0195 1798 Coils Coil 223 243 - -
Lal12g0195 1798 Pfam KIP1-like protein 14 87 IPR011684 GO:0003779
Lal12g0195 1798 Coils Coil 793 834 - -
Lal12g0195 1798 Coils Coil 681 722 - -
Lal12g0195 1798 PANTHER PROTEIN NETWORKED 4A 1 1798 - -
Lal12g0195 1798 Coils Coil 1250 1277 - -
Lal12g0195 1798 Coils Coil 650 670 - -
Lal12g0195 1798 Coils Coil 930 950 - -
Lal12g0195 1798 Coils Coil 426 453 - -
Lal12g0195 1798 Coils Coil 737 785 - -
Lal12g0195 1798 Coils Coil 468 495 - -
Lal12g0195 1798 PANTHER KINASE INTERACTING (KIP1-LIKE) FAMILY PROTEIN 1 1798 - -
Lal12g0195 1798 Coils Coil 251 355 - -
Lal12g0195 1798 Coils Coil 871 891 - -
Lal12g0195 1798 SUPERFAMILY Tropomyosin 429 638 - -
Lal12g0195 1798 SUPERFAMILY Tropomyosin 310 459 - -
Lal12g0195 1798 Coils Coil 1159 1193 - -
Lal12g0195 1798 Coils Coil 1663 1690 - -
Lal12g0195 1798 Coils Coil 1075 1102 - -
Lal12g0195 1798 Coils Coil 1285 1319 - -
Lal12g0195 1798 Coils Coil 580 628 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal12g0195 Lal-Chr12 1403485 1412315 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal12g0195 - - lang:109335385 2457.56
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal12g0195 12 1403485 1412315 Lal12g0195 12 1403485 1412315 ECH
Lal12g0195 12 1403485 1412315 Lal13g0168 13 1057376 1065825 LSH
Lal12g0195 12 1403485 1412315 Lal24g0147 24 1090585 1097160 LSH
Lal1g1921 1 21425953 21433454 Lal12g0195 12 1403485 1412315 PCT
Lal12g0195 12 1403485 1412315 Lal1g1921 1 21425953 21433454 PCT