Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g1805 ATGGGAGAGAAAGAAGAGAATAAAAACAATGTTGTTTTGAAGCTAGATTTACACTGCGAGGGTTGTGTAATGAGAATCAAAAAAGCTGTTCGGCACTTCAAAGGTGTGGAGGACGTAAAAGCTAATATGTCAGCTAATGAACTAACCGTTATCGGAAAAGTGGACTCAGTTATGTTACGAGATAAACTTGTCAAGAAAACCAGAAAGAAAATCGATATCGTTTCGCATCCGAAGAAGGAAGACGGTGCCGCCGAAGAATCGCCGGAGAAGAAATCTGAAAAGAATGAACCAAAAAAGATCACGGTGGTTTTGAAGACAGGAATGATCTGTGTCTGTGATGGTTGCATTCAAAAAGTTCAGAAGCTTATCCTCAAGGTCAAAGGAGCTGAATCTGCGAGCTTTGCTGGAAACAAAGAATTGGTAACAGTTGAGGGAACAATGGTTGCTGAAGATTTGGTATCATACATGAACAAGAAACTGAAGCGTAAAGTTGAGGTGGTTCAACCTAAGAAAGAGGAAAATAATGAAGTAAAAGGAGAAAGTGGAGAGAAAGAAAACAAGGAGGAGGAAAATGGAAGTGGGGAAATGGAAGGTGAAGTTGATGTTATCAAAATTGATGGATTTGACTGTGGGTATAATGGTCATTTCATGTATCGACAAAATAATAATGGGTATGTGAATGAAGGACAAGAATCTCCTGTCCCATCGAACGAAGGTTCTAGGGTTGAACAATTCCCATTTATTATGCTTCCTCAGATTTATCCTCATCCACAAATGTTTAGTGATGAAAACCCTAATGCTTGTTCTGTCATGTGA 816 0.3909 MGEKEENKNNVVLKLDLHCEGCVMRIKKAVRHFKGVEDVKANMSANELTVIGKVDSVMLRDKLVKKTRKKIDIVSHPKKEDGAAEESPEKKSEKNEPKKITVVLKTGMICVCDGCIQKVQKLILKVKGAESASFAGNKELVTVEGTMVAEDLVSYMNKKLKRKVEVVQPKKEENNEVKGESGEKENKEEENGSGEMEGEVDVIKIDGFDCGYNGHFMYRQNNNGYVNEGQESPVPSNEGSRVEQFPFIMLPQIYPHPQMFSDENPNACSVM 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g1805 271 Gene3D - 95 174 - -
Lal1g1805 271 Gene3D - 6 81 - -
Lal1g1805 271 Coils Coil 170 190 - -
Lal1g1805 271 Pfam Heavy-metal-associated domain 112 165 IPR006121 GO:0046872
Lal1g1805 271 Pfam Heavy-metal-associated domain 16 70 IPR006121 GO:0046872
Lal1g1805 271 MobiDBLite consensus disorder prediction 74 96 - -
Lal1g1805 271 SUPERFAMILY HMA, heavy metal-associated domain 11 65 IPR036163 GO:0046872
Lal1g1805 271 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 6 3 271 IPR044594 GO:0046872
Lal1g1805 271 MobiDBLite consensus disorder prediction 169 196 - -
Lal1g1805 271 ProSiteProfiles Heavy-metal-associated domain profile. 17 50 IPR006121 GO:0046872
Lal1g1805 271 SUPERFAMILY HMA, heavy metal-associated domain 104 156 IPR036163 GO:0046872
Lal1g1805 271 CDD HMA 112 145 IPR006121 GO:0046872
Lal1g1805 271 CDD HMA 17 55 IPR006121 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g1805 Lal-Chr1 20394126 20396699 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g1805 - - lang:109356180 374.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g1805 1 20394126 20396699 Lal1g1805 1 20394126 20396699 ECH
Lal11g1168 11 15422944 15424994 Lal1g1805 1 20394126 20396699 LSH
Lal1g1805 1 20394126 20396699 Lal20g0107 20 695510 697515 LSH