Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g1361 ATGGCGAGTAGAGATAGCAGTTATTCGACTCACCTTATCGATGGGGATGGTATATTCAATGTTGCCGGCATTGAAACTTTTATGAAAGAAGTAAAGTTGGCCGAATGTGGGCTTTCTTATGCTCTAGTTTCTATTATGGGTCCACAAAGTAGTGGCAAGAGCACGCTATTAAATAATTTATTTGGTACTAACTTCAGAGAGATGGATGCTTTTAAGGGAAGGTCTCAAACAACCAAAGGAATCTGGATGGCTAGATGTGCTGGCATAGAGCCTTGTACACTAGTGATGGATTTGGAGGGTACAGATGGAAGAGAACGCGGAGAGGATGATACTGCATTCGAAAAACAGAGTGCTCTATTTGCTCTTGCTGTCTCAGATATAGTACTAATAAATATGTGGTGCCATGACATTGGTCGTGAGCAAGCTGCAAATAAGCCGCTTTTGAAAACTGTCTTTCAGACACCACTTGAAAATTTAGAACCTGTTTTGCGAGAAGATATTCAGAAGATATGGGACTCTGTTCCTAAACCACAGGCTCACATGGAAACCCCACTTAGTGAATTTTTCAATGTTGAAGTTGTCGCTCTTTCCAGTTATGAAGAAAAGGAAGAACAATTTAGAGAGCAGGTCGCCAATTTGAGGCAACGATTCCATCATTCCATCGCTCCTGGTGGGCTTGCTGGGGACAGGCGTGGAGTGGTTCCTGCTTCTGGCTTTTCCTTTAGCTCTCAGCAGATATGGAAAGTCATCAAGGAGAACAAAGACCTTGACCTTCCTGCACATAAGGTCATGGTTGCCACTGTACGATGTGAAGAAATTGCCAACGAGAAATATGCTGCTTTTGCTGCAAACGAGGAGTGGTGTAAATTGGAAGAAACTGTGCAATCTGGCCCTATTACGGGATTTGGGAAAAAGCTCAATTCACTACTCGATGTGTATGATGCTGAAGCGATTTATTTTGATGAAGGTGTCAGATCTGCAAAACAAAAGCAACTTCAAGAAAAATTGTTGCAACTTGTTCAACCTGCATTCCAATCTGCACTGGGACATGTAAGGTCTGGAACATTGGATAAATTCAAGGAGACATTTGACAAGGCTTTAGAAAGAGGGGAAGGATTTTCTGAAGCTGCTAATAATTGCATCGAGTTTTGTATGGCTCAATTTGATAAAGCATGTGCAGATGTTGTTATTGAACAAGCAAACTGGGATACATATAAAGTAAGGGAGAAACTGCAGCGTGATATTGATGCACATGTTGCATCTGTACGTGCAGCTAAAATTTCGGAACTTACTTCATCATACGAGGAAAAACTGAAAGAGTCCTTGTCTGGACCTGTTGAAGCTCTTTTGGATGGAGCTAATAGTGATACTTGGCCATCAATAAGGAACCTTCTTAGGCGTGAGACTGAATCAGCTGTTTTGGGGTTCTCTAGTGCAGTTTCTGGGTTTGATATGGACGAAGACACAAGACAGAAAATGATTTTGAGTTTAGAAGATTATGCAAGGAGTGTGGTAGAAGGAAAGGCTAAGGAAGAAGCTGGAAGAGTTCTAATCCGTATGAAAGACAAGTGTGAACCTTCTGCAATATCCAAGTTGACTTTTTATTTCTTCAACTTTTACTTTAAAGACACTTACCTTGTATTTGAAAGCAGGTTTACAATGTTGTTTAGCCATGATTCTGATTCAATGCCTCGTGTTTGGACGGGGAAAGAAGATATCCGTGCCATCACCAAGACTGCTCGCTCAGCTTCTTTGAAGTTGCTATCTGTTATGGCTGTGATTCGTTTGAACGATAATGATACTGATAATATTGAGAAAACATTAGCAGTTGCATTGGTGGATTCATCAAACAGTGCTGCTAATAAGAGCATCACAATGGTTGACCCACTAGCTTCTAGCACCTGGGAACAGGAGGCCAACAAGCGTAGTAACAACTGGTTACCTCCCCCATGGGCAATAGTTGCTTTGCTTCCAGGAATCATATCCTTGACTAGCAAATTTATTCCAACTATCATGAACCTTATGAAAAAACTAGCAGAGGAGGGACAGAACCCTGCAAATAACAATCCTCAGAGAAACCAATCAAAAATTAATCATAATGCTCTTACAAGAAATGCTGTATCATCTAGTGCTTCATCTAATGTAACTTCATTGGACAATGAAAAGGAACATTCTAGCCCATCAAAATATGAGTAA 2196 0.4085 MASRDSSYSTHLIDGDGIFNVAGIETFMKEVKLAECGLSYALVSIMGPQSSGKSTLLNNLFGTNFREMDAFKGRSQTTKGIWMARCAGIEPCTLVMDLEGTDGRERGEDDTAFEKQSALFALAVSDIVLINMWCHDIGREQAANKPLLKTVFQTPLENLEPVLREDIQKIWDSVPKPQAHMETPLSEFFNVEVVALSSYEEKEEQFREQVANLRQRFHHSIAPGGLAGDRRGVVPASGFSFSSQQIWKVIKENKDLDLPAHKVMVATVRCEEIANEKYAAFAANEEWCKLEETVQSGPITGFGKKLNSLLDVYDAEAIYFDEGVRSAKQKQLQEKLLQLVQPAFQSALGHVRSGTLDKFKETFDKALERGEGFSEAANNCIEFCMAQFDKACADVVIEQANWDTYKVREKLQRDIDAHVASVRAAKISELTSSYEEKLKESLSGPVEALLDGANSDTWPSIRNLLRRETESAVLGFSSAVSGFDMDEDTRQKMILSLEDYARSVVEGKAKEEAGRVLIRMKDKCEPSAISKLTFYFFNFYFKDTYLVFESRFTMLFSHDSDSMPRVWTGKEDIRAITKTARSASLKLLSVMAVIRLNDNDTDNIEKTLAVALVDSSNSAANKSITMVDPLASSTWEQEANKRSNNWLPPPWAIVALLPGIISLTSKFIPTIMNLMKKLAEEGQNPANNNPQRNQSKINHNALTRNAVSSSASSNVTSLDNEKEHSSPSKYE 731
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g1361 731 Coils Coil 196 216 - -
Lal1g1361 731 CDD GBP 36 217 - -
Lal1g1361 731 Gene3D - 25 154 IPR027417 -
Lal1g1361 731 ProSiteProfiles GB1/RHD3-type guanine nucleotide-binding (G) domain profile. 37 230 IPR030386 GO:0005525
Lal1g1361 731 PANTHER PROTEIN ROOT HAIR DEFECTIVE 3 HOMOLOG 657 729 - -
Lal1g1361 731 PANTHER PROTEIN ROOT HAIR DEFECTIVE 3 HOMOLOG 154 523 - -
Lal1g1361 731 PANTHER PROTEIN ROOT HAIR DEFECTIVE 3 HOMOLOG 549 636 - -
Lal1g1361 731 PANTHER PROTEIN ROOT HAIR DEFECTIVE 3 HOMOLOG 8 153 - -
Lal1g1361 731 MobiDBLite consensus disorder prediction 682 721 - -
Lal1g1361 731 Pfam Root hair defective 3 GTP-binding protein (RHD3) GTPase domain 154 259 - -
Lal1g1361 731 Pfam Root hair defective 3 GTP-binding protein (RHD3) GTPase domain 46 153 - -
Lal1g1361 731 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 11 253 IPR027417 -
Lal1g1361 731 PANTHER PROTEIN SEY1 154 523 IPR008803 -
Lal1g1361 731 PANTHER PROTEIN SEY1 8 153 IPR008803 -
Lal1g1361 731 PANTHER PROTEIN SEY1 657 729 IPR008803 -
Lal1g1361 731 PANTHER PROTEIN SEY1 549 636 IPR008803 -
Lal1g1361 731 Pfam Sey1 three-helix bundle domain 549 640 IPR046758 -
Lal1g1361 731 Pfam Sey1 three-helix bundle domain 306 524 IPR046758 -
Lal1g1361 731 MobiDBLite consensus disorder prediction 682 731 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g1361 Lal-Chr1 15438331 15454580 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g1361 K22698 - gmx:100777656 1111.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal20g1092 20 15070174 15078974 Lal1g1361 1 15438331 15454580 LSH
Lal25g0327 25 2235351 2245431 Lal1g1361 1 15438331 15454580 PCT
Lal1g1361 1 15438331 15454580 Lal25g0327 25 2235351 2245431 PCT