Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g1318 ATGGTTAGGGCACTTGAACAAGAGCAAGAAAGTTATAGGTCAAAACTATTCCACTTTAAAGGAATGTTTGAGAACACGGGAAGACATACAAAGAGTTTGAGCATTGAAAGTGCTACCAAATTAGATCCTTCAGAAGAAGATGCAGTATCGTCGTCGTCATCATCATCATCATCATCCAAAAGTCAAGGATCAAACCCTATACAAAATTCTATACAAAATTCTGATAAAGGAACAAGACCAAGGATAATAAGCAAAGAAGAAATTGCAGCTAGAGAAGCCAATGAGAAACTAATGCAAGAAATGGAACAAATGAAGGAGAGATTTGCAAAACTTTTATTGGGTGAGGATATGTCTGGTGGAGGAAAAGGTGTTTCATCAGCTTTAGCATTATCAAATGCATTCACAAATCTTGCTGCTTCTCATTATTTTCTTGCTGAGAATGCAGCTGCTGTTTTTGGTGAACAAAAGCGCCTAGAACCAATGTCACCAGAAAGAAAATCAAGATGGAGAAAAGAAATTGATTGGCTTCTATCAGTCACTGATTACATTGTTGAAATGGTTCCTTCACAACAAAAATCTAAGGATGGATCAACCATGGAGATTATGACAACGCGTCAACGAACCGATCTTCACATGAACATCCCTGCATTGCGAAAGCTTGACACAATGCTTAATGATTGTCTAGATAATTTTAAAGGGCAAAATGAATTCTATTATGTGAAAAAAGAGGAAGGGGATGCAGATAAAGATGGCAAAACTGATGACAAGTGGTGGTTACCAACACCTAAGGTTCCTGTTGATGGTTTATCTGATGTTGCAAGAAAGTTTCTACAATATCAAAAAGATTGTGTAACTCAAGTACTTAAAGCAGCCATGGCCATAAATGCTCAAACCCTATCAGAAATGGAAATCCCTGAAAGCTATATCGAATCCCTACCCAAGAATGGAAGAGCAAGTTTAGGGGACACAATCTATCGTAGTATCACAGATGATTATTTTGATCCTGATCAGTTACTAGGCACTATGGACTTATCATCAGAACATAAAATCTTAGATCTCAAGAATAAAATTGAGGCATCGATTGTGATTTGGAAACGAAAGATGAACCAAAAGGATTCAAAATCAGCTTGGGGTTCTGCTGTAAGTATGGAAAAAAGAGAACTATTTGAAGAGAGAGCAGAAACTATCCTTCTTTTTTTAAAGCATCGTTTCCCTGGGATCCCTCAATCTGCATTGGATATAAGCAAAATTCAATTCAATAAGGATGTAGGGCAAGCTGTTCTTGAAAGCTATTCAAGAATATTAGAAAGTTTGGCCTATACAGTACTATCAAGAATTGAAGATGTATTGAATGCTGATTCTCAAAATCAAAATTCATCACAAGTAGGAAAAAAGAACAATATGAAAAACACAATTCCAAAACCTGAGAAGCCTTTAACTCCTAAAGAAGAGGTAGTAGTAACAGAAAAGGGTGGTGCAGAAGAAATACCTAATTCAATGACACTATCAGATTTTATGGGTTGGCTTGGTGACTCAGACATGAAAAAAGACCCTTCTATAGTTCCAGATGAATTGGATAATGAGATTGATAGTGGAAAACCTATTAAACTCTCAAACATAGTGACAGATAAAAAGGCCTCTTATCTTGAGAATTTGGGTGGTGTTAGAAGTCCAACATGTCGCCAATAA 1689 0.3653 MVRALEQEQESYRSKLFHFKGMFENTGRHTKSLSIESATKLDPSEEDAVSSSSSSSSSSKSQGSNPIQNSIQNSDKGTRPRIISKEEIAAREANEKLMQEMEQMKERFAKLLLGEDMSGGGKGVSSALALSNAFTNLAASHYFLAENAAAVFGEQKRLEPMSPERKSRWRKEIDWLLSVTDYIVEMVPSQQKSKDGSTMEIMTTRQRTDLHMNIPALRKLDTMLNDCLDNFKGQNEFYYVKKEEGDADKDGKTDDKWWLPTPKVPVDGLSDVARKFLQYQKDCVTQVLKAAMAINAQTLSEMEIPESYIESLPKNGRASLGDTIYRSITDDYFDPDQLLGTMDLSSEHKILDLKNKIEASIVIWKRKMNQKDSKSAWGSAVSMEKRELFEERAETILLFLKHRFPGIPQSALDISKIQFNKDVGQAVLESYSRILESLAYTVLSRIEDVLNADSQNQNSSQVGKKNNMKNTIPKPEKPLTPKEEVVVTEKGGAEEIPNSMTLSDFMGWLGDSDMKKDPSIVPDELDNEIDSGKPIKLSNIVTDKKASYLENLGGVRSPTCRQ 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g1318 562 Coils Coil 83 114 - -
Lal1g1318 562 MobiDBLite consensus disorder prediction 30 78 - -
Lal1g1318 562 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 99 561 IPR038937 GO:0005085
Lal1g1318 562 Gene3D PRONE domain, subdomain 1 105 454 - -
Lal1g1318 562 ProSiteProfiles PRONE domain profile. 91 463 IPR005512 GO:0005085
Lal1g1318 562 MobiDBLite consensus disorder prediction 454 481 - -
Lal1g1318 562 PANTHER RHO GUANYL-NUCLEOTIDE EXCHANGE FACTOR 99 561 - -
Lal1g1318 562 Pfam PRONE (Plant-specific Rop nucleotide exchanger) 99 457 IPR005512 GO:0005085
Lal1g1318 562 Gene3D PRONE domain, subdomain 2 303 419 - -
Lal1g1318 562 MobiDBLite consensus disorder prediction 30 81 - -
Lal1g1318 562 MobiDBLite consensus disorder prediction 454 468 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g1318 Lal-Chr1 14897690 14901246 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g1318 - - gmx:100812078 766.533
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal20g1165 20 16108449 16113041 Lal1g1318 1 14897690 14901246 LSH
Lal1g1318 1 14897690 14901246 Lal18g0180 18 1478930 1481961 LSH