Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g0180 ATGGTTAGGGCAGTAGAACAAGAACAAGAAAGTTATAGGTCTAAACTATCCCATTTTAAAGGGATGTTTGAGAATAAAGGAAGACATACAAAGAGTTTAAGCATTGAGAGTTCTACCGAACTAGACCCTTCAGAAGAAAATACAATACCATCATCATCATCATCGTCATCATTAAAAAGTCAAGGATTAAAACTTCTACATAGTTTTGATAAGGGTTCGAGGCAAAGGATAATATCCAAGGAGGAAATTGCAGCTAAAGAAACACATGAGAAGCTTTTACAGGAAATGGAACAAATGAAGGAGAGATTTGCAAAACTGCTTTTGGGGGAGGATATGTCTGGTGGAGGAAAAGGTGTTTCATCAGCTCTAGCATTATCAAATGCATTCACAAACCTTGCTGCTGCTGTTTTTGGTGAACAAAAGCGGCTAGAGCCAATGCCACCAGAAAGGAAAGCAAGATGGAGAAAAGAAATTGATTGGCTTCTATCAGTTCATGACTACATTGTTGAAATGGTTCCTTCACAACAAATATCAAAGGATGGCACAACCATGGAGATTATGACAACAAGACAACGAAGTGATCTCCACATGAATATCCCTGCATTAAGAAAGCTTGATACAATGCTTGGTGATTGTTTAGATAACTTCAAAGACCAAAAAGATTTCTTTTATGTAAAAAGAGAGGAAGGTGATGTAGATAAAGACAACACGAACAATGACAAATGGTGGTTACCAATACCTAAGGTTTCACCAGATGGTTTATCTGATGCAGCAAGAAAGTTTCTGCTATACCAGAAAGATTGTGTAACTCAAGTGCTTAAAGCAGCCATGGCCCTAAATGCTCAAACCCTAGTAGAAATGGAAATTCCTGAAAGCTATATTGACTCTCTTCCCAAGAATGGAAGAGCAAGTCTAGGGGAATCAATCTATCGTAGTATTACAGATGTTTTTTTCGATCCTGATCAGTTACTATGCACCATGGACTTATCATCAGAACATAAAATCCTAGAACTCAAGAATAAAATCGAGGCATCAATTGTGATTTGGAAGCGAAAGAAGAACCAAAAAGATTCAAAATCAGCTTGGGGTTATGCTGTGAGTATGGAAAAAAGAGAACTATTTGAAGAGAGAGCAGAAACTATCCTACTTTTCATAAAGCATCGTTTCCCTGGGATCCCTCAATCTACTTTGGATATAAGCAAAATCCAATTTAATAAGGATGTGGGGCAAGCTGTTCTTGAAAGCTATTCAAGAATATTGGAAAGTTTGGCCTATACAGTATTGTCAAGAATAGAAGATGTACTAAATGCTGATGCCCAAACCCAAAATCCAACACAATTAGGAAAAATGAGCAGTATGAGAAACACAATTCCAAGGTCAGAAAAACTTCCATCCCTTAAACAAGAGGTACAAGGAGAAGAACTATCTGCTTCAATTACACACTCAGACATAAAGAATGACCCATCTACAAGTCCAAATGAATTGGAGAATGAAATTGGTAGTGGAAAGCTTGAAAAACTCACAAACATAGTGACTGATAAGAAGACATCTTACCTAGAGAACTTGGGAGGTGTAAGAAGTCCAACATGTTGTCAATAA 1599 0.3727 MVRAVEQEQESYRSKLSHFKGMFENKGRHTKSLSIESSTELDPSEENTIPSSSSSSSLKSQGLKLLHSFDKGSRQRIISKEEIAAKETHEKLLQEMEQMKERFAKLLLGEDMSGGGKGVSSALALSNAFTNLAAAVFGEQKRLEPMPPERKARWRKEIDWLLSVHDYIVEMVPSQQISKDGTTMEIMTTRQRSDLHMNIPALRKLDTMLGDCLDNFKDQKDFFYVKREEGDVDKDNTNNDKWWLPIPKVSPDGLSDAARKFLLYQKDCVTQVLKAAMALNAQTLVEMEIPESYIDSLPKNGRASLGESIYRSITDVFFDPDQLLCTMDLSSEHKILELKNKIEASIVIWKRKKNQKDSKSAWGYAVSMEKRELFEERAETILLFIKHRFPGIPQSTLDISKIQFNKDVGQAVLESYSRILESLAYTVLSRIEDVLNADAQTQNPTQLGKMSSMRNTIPRSEKLPSLKQEVQGEELSASITHSDIKNDPSTSPNELENEIGSGKLEKLTNIVTDKKTSYLENLGGVRSPTCCQ 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g0180 532 MobiDBLite consensus disorder prediction 474 501 - -
Lal18g0180 532 Pfam PRONE (Plant-specific Rop nucleotide exchanger) 94 442 IPR005512 GO:0005085
Lal18g0180 532 Gene3D PRONE domain, subdomain 2 288 404 - -
Lal18g0180 532 Gene3D PRONE domain, subdomain 1 100 439 - -
Lal18g0180 532 ProSiteProfiles PRONE domain profile. 86 448 IPR005512 GO:0005085
Lal18g0180 532 MobiDBLite consensus disorder prediction 36 59 - -
Lal18g0180 532 PANTHER RHO GUANYL-NUCLEOTIDE EXCHANGE FACTOR 94 530 - -
Lal18g0180 532 MobiDBLite consensus disorder prediction 27 59 - -
Lal18g0180 532 MobiDBLite consensus disorder prediction 474 497 - -
Lal18g0180 532 Coils Coil 82 106 - -
Lal18g0180 532 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 94 530 IPR038937 GO:0005085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g0180 Lal-Chr18 1478930 1481961 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g0180 - - gmx:100812078 716.457
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal18g0180 18 1478930 1481961 Lal18g0180 18 1478930 1481961 ECH
Lal20g1165 20 16108449 16113041 Lal18g0180 18 1478930 1481961 LSH
Lal1g1318 1 14897690 14901246 Lal18g0180 18 1478930 1481961 LSH