Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0792 TCTCTTCCATTTGTTTCTCTGTTCTTTCTATTTTTCTCATCCAAACAATTCTCAAATAAACTTCATCTTCCATTAATACCCATTTTCATTTTCTCACCAAAAATCGTTCCTTTCTTCTTAAAATACATTCCCAATACCAAACATTTCATTCATTCCTTTTGGTTCAGGCACGACTTCTCCGAAATGTCTAAATCTCAAAATGATCCCCTTAGGCAAGCTGAAACAAATTGTGGATCACTCGTTTACGAACTTCAGATAATATGGGATGAAGTCGGGGAGTCTGAGACTGAAAAGGATAGAATGTTGTTTGAGCTCGAACAGGAGTGTCTAGAAGTATACAGAAGAAGGGTAGATAAAGAAAATCAGTCTAGAGCTCAATTAAAGCAGGAAATTGCGGATTCTGAGGCGGATCTGGCAGCTATCTGTTCAGCAATGGGAGAGAGACCATTACATATTAGGCAGTCTGATCAAATTGCTCAAAGCTTGAAAGAAGAGCTAGCAATAATTCGCCCAGAGCTGGAGGATATGCGGAGAAGGAAGTCTGAGCGTAGAAATCAATTTATTGAAGTTGAAGAGCAGATTCGAGTTATCTCAAATGAGATTTATGGTCCAAGGGAGGATATTCAAGCCATTGTAGATGAAAGTGATTTATCATTGAGAAAGCTTGACGAATTGCACAAACAGCTTCTTGCACTTCAAAAGGAAAAGAGTGATCGCCTCAAGAAGGTCCAGGACCACTTGTATACATTAAATTCTCTTTGTTCAGTGCTTGCTTTGGACTTTAGGCAGACAGTGAGTGAAGTTCATCCGAGTTTAGGAAATGCAGGAGGATCTAAGAGTGTAAGTAATGATACCATCAAGCAATTGACTGCTGCTATAGAAGAAGTGCGGAGAGTTAAATTACAGAGAATGCAGAAGCTGCAAGATCTTGCAACAACAATGTTGGAGCTCTGGAATTTGATGGATACACCAATTGAAGAGCAACAGATGTTTCAGAATGTTACTTGTAATATAGCTGCTTCAGAACATGAAGTAACTGAACCAAACTCCTTGTCCGTCGACTTCATCAATTGTGTTGAGGTAGAAGTAGCTAGGCTTGAAGAGTTAAAATCAAGCAAAATGAAAGAGCTTGTTATGAGGAAGAGAGCAGAGCTAGAGGAGATTTGTCAAAAGACTCATTTGGTTCTGCAAGTTGATAGTGCAGTGGAATATGCTGTTGAGACTATAGAGTCTGGACTTTTAGACCCTGCTTCTGTGCTTGAACAACTTGAACTTCACATTGCCCAAGTCAAAGAGGAAGCTTTTAGCAGAAAAGAAATACTTGAAAAGGTTGAGAAATGGTTGTCAGCATGCGAAGAAGAGTCCTGGCTTGAGGAATACAACAAGGATGAAAATCGATACAATGCCGGTAGAGGTACCCATCTTACTCTCAAGCGAGCTGAGAAAGCCCGTATCCTTGTTAACAAACTTCCAGCAATGGTAGATGGTTTGACTTCAAAAACTATAACATGGGAAAAGGACAAAGGCATTGAGTTCACATATGATGGTACCCTTTTGCTCTCTATGCTTGAAGACTACACCATGTTACGGCAAGAGAAGGAACAAGAACGTCTTAGGCAGCGGGAAATGAAGAAACTTCACGGACAATTGACAGCAGAACAGGAAACAAAATATGGGTCAAAACCAAGCCTTTCAAAGCCTCTGAGTGCAAGAAAGGAACCTAGAATGTCAATTGGAAATGTAGCAGCTAGTAGAAGAGTTTATGTTGGAGGAGGAACGATTCAAAGTCCAAAACCTTATTCAAAAGCTATTCCATCCTCATGCTCCACAAAAAAGACTAACAAAGCTCGCCAAATTGAGCAACAAGATTACCTAGATGATAGCGCTTCATATTTATCATCAGCTAGAAGAGGATTGGATATTACTACTGGTGTCCCTTTCAGAAAACACTCATTTGGTGCTGGAAGTGTTTGTGGCATAGAATCTCCTTCGGCGCGACAACCTTTTTCTCCCATCTCTTCAAGTTCAAAAGTATCATCAAAAGCAAATGTTGCAAATGGCATAGATAATTTGAATATACACAACACTGAGAAGTTGCAGAAAACAATGACAGTTAACAATTTGCCATTCACCACTCCCCCAAAGACAGTGACATTGGTAGATGAAGAGAATAAAACTCCAAAGAAGATGCGTACTATTCCCGTCCCTCCTACACCTTTGACAATGTCAGTTCCTGTCCCGACCTCGCCTTCAATGAACTTAGCCATGACTCCAGCTCCTTCATCAGTTAGTTTTCGAGGTGACTTGGTTCAAGAGACTGAATATTCCTTTGAAGAAAGAAGGCTCAGTTTTGTGTTAGCATGA 2364 0.4019 SLPFVSLFFLFFSSKQFSNKLHLPLIPIFIFSPKIVPFFLKYIPNTKHFIHSFWFRHDFSEMSKSQNDPLRQAETNCGSLVYELQIIWDEVGESETEKDRMLFELEQECLEVYRRRVDKENQSRAQLKQEIADSEADLAAICSAMGERPLHIRQSDQIAQSLKEELAIIRPELEDMRRRKSERRNQFIEVEEQIRVISNEIYGPREDIQAIVDESDLSLRKLDELHKQLLALQKEKSDRLKKVQDHLYTLNSLCSVLALDFRQTVSEVHPSLGNAGGSKSVSNDTIKQLTAAIEEVRRVKLQRMQKLQDLATTMLELWNLMDTPIEEQQMFQNVTCNIAASEHEVTEPNSLSVDFINCVEVEVARLEELKSSKMKELVMRKRAELEEICQKTHLVLQVDSAVEYAVETIESGLLDPASVLEQLELHIAQVKEEAFSRKEILEKVEKWLSACEEESWLEEYNKDENRYNAGRGTHLTLKRAEKARILVNKLPAMVDGLTSKTITWEKDKGIEFTYDGTLLLSMLEDYTMLRQEKEQERLRQREMKKLHGQLTAEQETKYGSKPSLSKPLSARKEPRMSIGNVAASRRVYVGGGTIQSPKPYSKAIPSSCSTKKTNKARQIEQQDYLDDSASYLSSARRGLDITTGVPFRKHSFGAGSVCGIESPSARQPFSPISSSSKVSSKANVANGIDNLNIHNTEKLQKTMTVNNLPFTTPPKTVTLVDEENKTPKKMRTIPVPPTPLTMSVPVPTSPSMNLAMTPAPSSVSFRGDLVQETEYSFEERRLSFVLA 787
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0792 787 Pfam Microtubule associated protein (MAP65/ASE1 family) 80 567 - -
Lal1g0792 787 MobiDBLite consensus disorder prediction 548 577 - -
Lal1g0792 787 PANTHER 65-KDA MICROTUBULE-ASSOCIATED-LIKE PROTEIN 68 701 - -
Lal1g0792 787 Gene3D - 426 560 - -
Lal1g0792 787 Coils Coil 110 137 - -
Lal1g0792 787 PANTHER PROTEIN REGULATOR OF CYTOKINESIS 1 PRC1-RELATED 68 701 IPR007145 GO:0000226|GO:0008017
Lal1g0792 787 Coils Coil 173 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0792 Lal-Chr1 5382360 5388502 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g0792 62 610 EF-hand Containing Proteins AT5G62250 54.562 0.0 530
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g0792 K16732 - gmx:100777734 959.133
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0792 1 5382360 5388502 Lal1g0792 1 5382360 5388502 ECH
Lal1g0792 1 5382360 5388502 Lal9g0764 9 5358089 5362857 LSH
Lal1g0792 1 5382360 5388502 Lal12g0697 12 5204275 5210054 PCT
Lal1g0792 1 5382360 5388502 Lal13g0798 13 5294819 5299995 PCT
Lal12g0697 12 5204275 5210054 Lal1g0792 1 5382360 5388502 PCT
Lal13g0798 13 5294819 5299995 Lal1g0792 1 5382360 5388502 PCT