Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g0798 CTCAAATTTCATAACGGCTACATTCATTCTCTCTCTTTTTCCATCCGTCGCTCTTTTCATTTCAAACCAAAAAGTAAAAACTCATTCTATCAAAACAACATACACTTTCATTTTCACTCTTCCATTCAACACGAACGAACGAAATTCATACACAAACTAATTCATCGATCCACTGTGTTGTTCAGATACAAGTGCTCCAAAATGTCTAAACCTCAAAATGATCCCATTTTGCAAGCTGAAACAACATGTGGAACACTTCTATATGAGCTTCAGATAATATGGGATGAAGTTGGGGAGTCTGAGACTGACAGAGATAGAATGCTGTATGAGCTTGAACAAGAGTGTCTAGAAGTGTACAGAAGGAAGGTTGATAATGCAAATCGGTCTAGAGCTCAATTAAGGCAGGCAATTGCTGATTGTGAGGCAGAACTTGCAGCCATCTGTTCAGCAATGGGAGAGAGACCAGTACATATTCGGCAGACTGATCAAGTTGCGGAAAGCTTGAAAGAAGAGCTCATAAGAATTCGTCCGCAGTTGGAGGAGATGCAGAAAAAGAAGTCTGAGCGTAGAAATCAATTTATTGAAGTTCAAGAGCAGATTCAAGCTATCTCAACTGAGATTTATGGTCCCAGAGAGTACATTGAAGGCATTGTTGATCAAACTGATTTATCCTTGAGAAAACTTGAAGAATTGCAAGGACAGCTGCATGAACTTCAAATTGAGAAGAGCGTCCGCCTTAAGAAGATCCATGAGCACTTGTATACTTTGAACTCTCTTTGTTCAGTGCTTGGTTTGGACTTTTATCAGACAGTCAATGGAATTCATCCCAGTTTAGGGGACCCAGAAGGATCTAAGAATGTAAGCAATGATACCCTCCAACAACTGGATGTTGCTATACAACAACTGCTGGAAGTTAAATTACTGAGAATGCAGAAGCTCCAAGATCTTGCAACAACAATGTTGGAGCTTTGGAACTTGATGGATACACCTATAGAAGAGCAACAGATGTTTCAGAGTGTTACTTGTAATATAGCTGCTTCAGAAGATGAACTTACTGAACCAAATACACTATCGATGGACTTGATCAATTGTAATTCACAGAGAAGTAATATTGTCATGCAGGTTGACACGGAAGTATCTAGGTTGGAAAAATTAAAATCTAGCAAAATGAAAGAGCTTGTATTGAAAAAGAGAACTGAGCTGGAAGAGATTTGTCGAAAGACACATTTGGTTCCAGAAGTAGATAGTGCAGTGGAATACGCTGTTGAAGCTGTAGAGTCTGGAACTGTGGACCCTGTTTCCGTGCTTGAACAAATTGAACTTCAAATTGTCCAAGTAAAGGAGGAAGCTTTTAGTAGAAAAGAAATACTTGAAAAGGTTGAGAAATGGTTGGCAGCGTGTGATGAGGAGTCTTGGCTTGAAGAGTACAACAGGGATGAAAATCGATACAATGCTGGGAGAGGTGCTCATCTTACACTCAAGCGAGCTGAGAAAGCTCGTACCGCTGTTAACAAAATTCCAGCAATGATAGATGGTTTGACTTCAAAAACTGTAGCTTGGGAAAAGGAAAAAGGCATTGAGTTCACATATGATGGTATTCGTCTGCTCTCTATGCTTGAAGAGTACAACATATTACGGGTAGAGAAAGAGCAAGAACGTCGTAGGCAGAGGGACCTGAAGAAACTTCAGGGACAAATGATAGCAGAACAGGAGGTGCTTTATGGGTCAAAACCAAGCCCTTCAAAGCCTCAGAGTGTTAAAAAGGGACCCAGGATGTCAACTGGAGGTGCTTCTAGTAGAAGAGTTTCCCTTGGAGGAGCAATGCTTCAAACTCCAAAGCCTGATTCAAAAGCAACTCATTCACGTGCTTTGAGAAAGACTGACAAAGTGCACCAAATTGAGCAACTAAATTACCTGGATGATGATGCCTCTTGTTTATCAGCAGCTAGAAGAGGCTTGGATATCGTTGGCGTTCCTGTAAAAAAGCACTCATTCGGCGCTGGGAGTGCTCGTGACATAGAAACTCTGCCCCGACAACCTTTTTCTCCCATCTCTTCCAATGCATCATCAAAAGTGAATATAGCAAATGCCAAAGATGAACTGAAAATGCAGAGTGAGAAGTTGCAGAGAACAATATCACTTAACAATGCACCATTCTCTACTCCCTCCAAGACAACCCCCACAGTTGATGAAGAGAATAGAACTCCAAAAACAGTGCCTATTCCCATTCCTGCTACGCCTTTGACAGTGTCAATTCCAATGAATATGGTTGTGACTCCAGCAGCTCCTTCATCAGTTTCTTTTAGAGGTGACTTGGTTCAAGAGATTGAATATTCCTTTGAGGAAAGAAGGCTTGCTTATATGTTAGCATGA 2373 0.4092 LKFHNGYIHSLSFSIRRSFHFKPKSKNSFYQNNIHFHFHSSIQHERTKFIHKLIHRSTVLFRYKCSKMSKPQNDPILQAETTCGTLLYELQIIWDEVGESETDRDRMLYELEQECLEVYRRKVDNANRSRAQLRQAIADCEAELAAICSAMGERPVHIRQTDQVAESLKEELIRIRPQLEEMQKKKSERRNQFIEVQEQIQAISTEIYGPREYIEGIVDQTDLSLRKLEELQGQLHELQIEKSVRLKKIHEHLYTLNSLCSVLGLDFYQTVNGIHPSLGDPEGSKNVSNDTLQQLDVAIQQLLEVKLLRMQKLQDLATTMLELWNLMDTPIEEQQMFQSVTCNIAASEDELTEPNTLSMDLINCNSQRSNIVMQVDTEVSRLEKLKSSKMKELVLKKRTELEEICRKTHLVPEVDSAVEYAVEAVESGTVDPVSVLEQIELQIVQVKEEAFSRKEILEKVEKWLAACDEESWLEEYNRDENRYNAGRGAHLTLKRAEKARTAVNKIPAMIDGLTSKTVAWEKEKGIEFTYDGIRLLSMLEEYNILRVEKEQERRRQRDLKKLQGQMIAEQEVLYGSKPSPSKPQSVKKGPRMSTGGASSRRVSLGGAMLQTPKPDSKATHSRALRKTDKVHQIEQLNYLDDDASCLSAARRGLDIVGVPVKKHSFGAGSARDIETLPRQPFSPISSNASSKVNIANAKDELKMQSEKLQRTISLNNAPFSTPSKTTPTVDEENRTPKTVPIPIPATPLTVSIPMNMVVTPAAPSSVSFRGDLVQEIEYSFEERRLAYMLA 790
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g0798 790 Pfam Microtubule associated protein (MAP65/ASE1 family) 85 584 - -
Lal13g0798 790 Gene3D - 443 576 - -
Lal13g0798 790 MobiDBLite consensus disorder prediction 577 600 - -
Lal13g0798 790 MobiDBLite consensus disorder prediction 716 733 - -
Lal13g0798 790 Coils Coil 165 199 - -
Lal13g0798 790 PANTHER 65-KDA MICROTUBULE-ASSOCIATED-LIKE PROTEIN 74 714 - -
Lal13g0798 790 Coils Coil 116 143 - -
Lal13g0798 790 Coils Coil 221 241 - -
Lal13g0798 790 MobiDBLite consensus disorder prediction 570 602 - -
Lal13g0798 790 PANTHER PROTEIN REGULATOR OF CYTOKINESIS 1 PRC1-RELATED 74 714 IPR007145 GO:0000226|GO:0008017
Lal13g0798 790 Coils Coil 691 714 - -
Lal13g0798 790 MobiDBLite consensus disorder prediction 716 742 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g0798 Lal-Chr13 5294819 5299995 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal13g0798 78 595 EF-hand Containing Proteins AT5G62250 56.629 3.22e-176 516
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal13g0798 K16732 - gmx:100777734 1106.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal12g0697 12 5204275 5210054 Lal13g0798 13 5294819 5299995 LSH
Lal1g0792 1 5382360 5388502 Lal13g0798 13 5294819 5299995 PCT
Lal9g0764 9 5358089 5362857 Lal13g0798 13 5294819 5299995 PCT
Lal13g0798 13 5294819 5299995 Lal1g0792 1 5382360 5388502 PCT
Lal13g0798 13 5294819 5299995 Lal9g0764 9 5358089 5362857 PCT