Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal12g0697 ATGTCTAAACCTGAAAACGATCCCATTTTGCAAGCTGAAACAACATGTGGAACACTTCTTTATGAACTGCAGATAATATGGGATGAAGTTGGGGAGTCTGAGATTGACAGAGATAGAATGCTGTATGAGCTTGAACAAGAGTGTTTAGAAGTGTACAGAAGGAAGGTTGATCAGGCAAATCGGTGTAGAGCTCAATTAAGGCAGGCAATTGCTGATTGCGAGGCGGAACTTGCGGCCATCTGTTCAGCAATGGGAGAGAGACCAATACATATTAGGCAGAGTGATCAAACTGCGGAAAGCTTGAAAGAAGAGCTCATAAGAATTCGACCGCAGTTGGAGGAGATGCAGAAAAAGAAGTCTGAGCGTAGAAATCAATTTATTGAAGTTCAAGATCAGATTCAAATTATCTCAACTGAGATTTATGGTTCCAGAGAGCACACTTTAGCAATTGTAGATGAAACTGATTTATCCTTGAGAAAACTTGAAGAATTGCACAGACAGATGCATGCACTTCATACTGAGAAGAGTGCCCGCCTTAAGAAGGTCCAGGAGCACCTGTATACTTTGGACTCTCTTTGTTCAGTGCTTGGTTTGGACTTTTATCAGACAGTCAATGGAATTCATCCCAGTTTAGGGGACCCAGAAGGATCTAAGAGTGTAAGCAACGATACCCTCCAGAAACTGGATGTTTCTATTCATCAACTGCGGGAAGTTAAATTACAGAGAATGCAGAAGCTCCAAGATCTTGCATCAACAATGTTGGAGCTCTGGAACTTGATGGATACACCTATAAAAGAGCAACAAGTGTTTCAGAATGTTACTTGTAATATAGCTGCTTCAGAAAATGAAGTAACTGAACCAAATACATTATCGATGGACTTAATCAATTGCGTTGAACTGGAAGTATCTAGGTTGGAAAAATTAAAATCAAGCAAAATGAAAGAGCTTGTATTGAAGAAGAGAAATGAGCTGGAGGAGATTTGTCGAAAGACTCATTTTGTTCCAGAAGTAGATGGTGCAGTGGAATATGCTATTGAAGCTCTAGAGTCTGGAACTGTGAATCCTGCTTCCGTGCTTGAACAAATTGAGCTTCAGATTGTCCAAATCAAAGAGGAAGCTTTTAGCAGAAAAGAAATACTTGAAAAGGTTGAGAAATGGTTGGCAGCATGTGATGAAGAGTCTTGGCTTGAAGAACACGAAAGGGATGAAAATCGATTCAATGCTGGGAGAGGTGCTCATCTTACTCTCCAGCGAGCTACGAGAGCTCGTAAGGCAGTGAACAAAATTCCAGCTATGGTTGATGGATTGAGTTCAAAAACTGTAGCTTGGGAAAAGCAAAAGGGCATTGAGTTCACATATGATGGTATTCGTCTGCTCTCCATGCTTGAAGAGTACAACATATTACGGCAAGAGAAAGAGCAAGAACGCCGTAGACAGCGGGATCTGAAGAAACTTCAAGGACAAATGATAGCGCAACAGGAGGCGCTATATGGGTCAAAACCAAGCCCTTCAAAGCCCCAGAGTGTAAAAAAGGGACCTAGAATGTCAACTGGAGGTGCAGCTAGTAGAAGAGTTTCCCTTGGAGGAGCAATGCTTCAAACTCCAAAACCTACTCATTCCCGTGCCCTGAGAAAGACTGACAAAGTGCACCAAATTGAGCAACTAAATTACCTGGATGATGGTGCCTCATGTTTATCTGCAGCTAGAAGAGGATTGGATATTGCCGGCGTTCCTGCAAAAAAACACTCATTTGGTGCTGGGAGCACTCATGACATAGAAACTTCTCTTCCCCGAAAACCTTTTTCTCCAATCTCTTCCAATGTATCATCTAATGCTAATATGACAAATGCCAAAGATGATGTGAAAATGCAGAGTGAGAATTTGCAGAGAACAATATCACCTAACAATATTCTATTCTCAACTCCTTCCAAGACAACCACTGTGGTTGATGAAGAGAATAGAACTCCAAAGGCAATGCCTATTCCTATCCCTACTACACCTTTGACAGTGTCAGTTCCGATGAATATGGTGGCGACTCCGGCAGGTCCCTCATCAGTTTCTTCTGGAGGTAACTTGGTTCAACAGATTGAATATTCTTTTGAAGAAAGAAGGTTGGCTTATATGTTAGCATGA 2133 0.4163 MSKPENDPILQAETTCGTLLYELQIIWDEVGESEIDRDRMLYELEQECLEVYRRKVDQANRCRAQLRQAIADCEAELAAICSAMGERPIHIRQSDQTAESLKEELIRIRPQLEEMQKKKSERRNQFIEVQDQIQIISTEIYGSREHTLAIVDETDLSLRKLEELHRQMHALHTEKSARLKKVQEHLYTLDSLCSVLGLDFYQTVNGIHPSLGDPEGSKSVSNDTLQKLDVSIHQLREVKLQRMQKLQDLASTMLELWNLMDTPIKEQQVFQNVTCNIAASENEVTEPNTLSMDLINCVELEVSRLEKLKSSKMKELVLKKRNELEEICRKTHFVPEVDGAVEYAIEALESGTVNPASVLEQIELQIVQIKEEAFSRKEILEKVEKWLAACDEESWLEEHERDENRFNAGRGAHLTLQRATRARKAVNKIPAMVDGLSSKTVAWEKQKGIEFTYDGIRLLSMLEEYNILRQEKEQERRRQRDLKKLQGQMIAQQEALYGSKPSPSKPQSVKKGPRMSTGGAASRRVSLGGAMLQTPKPTHSRALRKTDKVHQIEQLNYLDDGASCLSAARRGLDIAGVPAKKHSFGAGSTHDIETSLPRKPFSPISSNVSSNANMTNAKDDVKMQSENLQRTISPNNILFSTPSKTTTVVDEENRTPKAMPIPIPTTPLTVSVPMNMVATPAGPSSVSSGGNLVQQIEYSFEERRLAYMLA 710
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal12g0697 710 Coils Coil 98 132 - -
Lal12g0697 710 Gene3D - 366 499 - -
Lal12g0697 710 MobiDBLite consensus disorder prediction 584 613 - -
Lal12g0697 710 MobiDBLite consensus disorder prediction 492 523 - -
Lal12g0697 710 Coils Coil 611 631 - -
Lal12g0697 710 PANTHER PROTEIN REGULATOR OF CYTOKINESIS 1 PRC1-RELATED 7 634 IPR007145 GO:0000226|GO:0008017
Lal12g0697 710 MobiDBLite consensus disorder prediction 492 511 - -
Lal12g0697 710 Coils Coil 458 488 - -
Lal12g0697 710 PANTHER 65-KDA MICROTUBULE-ASSOCIATED-LIKE PROTEIN 7 634 - -
Lal12g0697 710 Coils Coil 49 76 - -
Lal12g0697 710 MobiDBLite consensus disorder prediction 599 613 - -
Lal12g0697 710 Pfam Microtubule associated protein (MAP65/ASE1 family) 18 507 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal12g0697 Lal-Chr12 5204275 5210054 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal12g0697 11 518 EF-hand Containing Proteins AT5G62250 57.722 0.0 526
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal12g0697 K16732 - gmx:100777734 1078.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal12g0697 12 5204275 5210054 Lal13g0798 13 5294819 5299995 LSH
Lal1g0792 1 5382360 5388502 Lal12g0697 12 5204275 5210054 PCT
Lal9g0764 9 5358089 5362857 Lal12g0697 12 5204275 5210054 PCT
Lal12g0697 12 5204275 5210054 Lal1g0792 1 5382360 5388502 PCT
Lal12g0697 12 5204275 5210054 Lal9g0764 9 5358089 5362857 PCT