Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal19g1247 ATGGAAAGTGAAGGGAAGAAGGATACCAAAATCATTCTGACGAAACCGTTTTCATTGGAAAGTGAATCAGATAATTCAGATGCCGATTATAGAGCCCCTAAGCTCCTTAATCGCATATTAAATCTGCTCAAGAATCTACCATCTCTGTTTAATTTCCCAAAGTCTCAACTTCAGTGCTATGGTGAAGCAGTGTACTGTAGAGGTTCTGACTTGCTAAGAAAGTGTAACAGTGAGCAGAGTCCAGTGGAGAGGTTCAAATCTGTGGTAGCTTGGAGCATATCTACCACACGTCCTACATCTTTCGCGGTTGCTCCCTATAATCCCACTCTTGGAGAGACACACCATGTTTCCAAGGGCAATCTCAATGTCCTACTAGAGCAGGTTTCTCACAATCCTCCAGTTTCTGCTCTCTATGCAACAGATGAGAAGGAGAACATTGAGATGATATGGTGCCAGCAACCTGTTCTGAAGTTTTGGGGCACTTCAATTGAAGCTCAAGTGCATGGTAAAAGACAGCTGAAGCTCCTAAATCATGGAGAAACATATGAAATGAATTCTCCTCATCTTTTAATTAGAATTCTTCCAGTTCCTAAGGTTAATTGGGTTGGCGGTGTTAATATACGGTGCCTAGAGACAGGTCTGGTAGCTGAGTTATTCTACAAATCAACTCTTTCTTTTCTAGGACTCGGGAAGAATCATAAATTGATCCAAGGGAAGATCATTGACTCTTCATCATCTAAAGTTCTATATGAAGTTCATGGCTATTGGGATAGAACTGTAACACTGAAGGATACCAATAGTGGAGAGATCAGAGTTATATATGATGCAAAAGAAGTCATTTCAGGACTCCAAGCTCCTATTGTTAAGGATCCACAAAGAGTGTGGCCAACTGAATCAGCTCTTGTTTGGAGTGAGTTGAGCCAAGCCATTCTGAACAATGACTGGGAGAAAGCAAGAGAAGCAAAGCAACTTGTGGAGGAAAGACAGAGGAAAATCACTGCAGAGAGAGAGACAAATGGGAAGGCTTGGATTCCTAAGCATTTTGCAGTGTCCTTCAGTAAAGAAGGTGGTTGGAACTGCTCACCCATTCATAAATGGGTCCCTGATGCACCTATTATAGCCTGA 1125 0.4196 MESEGKKDTKIILTKPFSLESESDNSDADYRAPKLLNRILNLLKNLPSLFNFPKSQLQCYGEAVYCRGSDLLRKCNSEQSPVERFKSVVAWSISTTRPTSFAVAPYNPTLGETHHVSKGNLNVLLEQVSHNPPVSALYATDEKENIEMIWCQQPVLKFWGTSIEAQVHGKRQLKLLNHGETYEMNSPHLLIRILPVPKVNWVGGVNIRCLETGLVAELFYKSTLSFLGLGKNHKLIQGKIIDSSSSKVLYEVHGYWDRTVTLKDTNSGEIRVIYDAKEVISGLQAPIVKDPQRVWPTESALVWSELSQAILNNDWEKAREAKQLVEERQRKITAERETNGKAWIPKHFAVSFSKEGGWNCSPIHKWVPDAPIIA 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal19g1247 374 Gene3D - 295 363 - -
Lal19g1247 374 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 3 372 IPR000648 GO:0008289
Lal19g1247 374 Gene3D - 106 284 - -
Lal19g1247 374 PANTHER OSBP(OXYSTEROL-BINDING PROTEIN)-RELATED PROTEIN 4C 3 372 - -
Lal19g1247 374 Pfam Oxysterol-binding protein 46 305 IPR000648 GO:0008289
Lal19g1247 374 SUPERFAMILY Oxysterol-binding protein-like 42 360 IPR037239 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal19g1247 Lal-Chr19 15686763 15690651 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal19g1247 K22285 - gmx:100813302 561.992
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal19g1247 19 15686763 15690651 Lal19g1247 19 15686763 15690651 ECH
Lal7g1104 7 17015262 17024909 Lal19g1247 19 15686763 15690651 LSH
Lal19g1247 19 15686763 15690651 Lal17g1564 17 17083713 17089950 PCT
Lal19g1247 19 15686763 15690651 Lal21g1236 21 15418060 15424742 PCT
Lal17g1564 17 17083713 17089950 Lal19g1247 19 15686763 15690651 PCT
Lal21g1236 21 15418060 15424742 Lal19g1247 19 15686763 15690651 PCT