Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal19g1077 ATGCTGAGAGTTGCTGCAAAGAGATTTCTAGGAACACCAACGGCGTCTTCAGCCGTTAGGGTTCCGCCGCGATTTTACCATGAAAGGGTTGTTGACCATTACAACAACCCTCGCAACGTTGGTTCATTCGATAAGAATGATCCCACCGTCGGAACCGGCTTGGTTGGTGCACCGGCGTGTGGTGATGTCATGAAACTGCAGATTAAGGTTGATGAGAACACCGGAAAGATCGTTGATGCTCGATTCAAAACTTTTGGGTGTGGCTCCGCCATTGCTTCTTCCTCTGTTGCTACTGAATGGGTAAAGGGAAAACAGATGGAGGAAGTTCTGTCTATTAAAAACACTGAAATTGCGAAGCATCTTTCTCTTCCACCGGTTAAGCTTCACTGCAGCATGCTTGCTGAAGATGCTATTAAAGCTGCTGTTAAAGACTATGAAGCGAAGCGTGCTAAGACAACAGTGACAGAAAAGGCTGTCAATGCTTGA 486 0.465 MLRVAAKRFLGTPTASSAVRVPPRFYHERVVDHYNNPRNVGSFDKNDPTVGTGLVGAPACGDVMKLQIKVDENTGKIVDARFKTFGCGSAIASSSVATEWVKGKQMEEVLSIKNTEIAKHLSLPPVKLHCSMLAEDAIKAAVKDYEAKRAKTTVTEKAVNA 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal19g1077 161 Pfam NifU-like N terminal domain 26 151 IPR002871 GO:0005506|GO:0016226|GO:0051536
Lal19g1077 161 SUPERFAMILY SufE/NifU 25 151 - -
Lal19g1077 161 TIGRFAM iscU: FeS cluster assembly scaffold IscU 26 149 IPR011339 GO:0005506|GO:0016226|GO:0051536
Lal19g1077 161 CDD IscU_like 26 141 IPR002871 GO:0005506|GO:0016226|GO:0051536
Lal19g1077 161 Gene3D - 25 161 - -
Lal19g1077 161 PANTHER IRON-SULFUR CLUSTER ASSEMBLY ENZYME NIFU HOMOLOG 18 157 IPR002871 GO:0005506|GO:0016226|GO:0051536
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal19g1077 Lal-Chr19 14489845 14492021 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal19g1077 K22068 - gmx:100812566 273.092
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal14g1515 14 15987137 15989057 Lal19g1077 19 14489845 14492021 LSH
Lal7g0919 7 15638327 15640388 Lal19g1077 19 14489845 14492021 LSH
Lal19g1077 19 14489845 14492021 Lal17g0913 17 7065986 7068285 PCT
Lal17g0913 17 7065986 7068285 Lal19g1077 19 14489845 14492021 PCT