Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal14g1515 ATGCTGAGGCTAGTCGCAAAGAAACTTTTGGGAACGCCAACGGCGTCTTCAACCGTTAGGGTTCTGCCGCGATTTTACCACGAAAGGGTTGTCGATCACTATAACAACCCTCGCAACGTTGGATCCTTCGATAAGAAGGATCCCACCGTCGGAACGGGTTTGGTTGGGGCACCAGCGTGTGGCGATGTCATGAAATTGCAGATTAAGGTTGACGACAAAACGGGAAAGATCGTTGATGCTCGATTCAAAACTTTCGGCTGTGGCTCCGCCATTGCTTCTTCCTCCGTTGCTACTGAATGGGTTAAGGGAAAACAAATGGAAGAAGTTTTGTCCATTAAAAACACTGAAATTGCCAAGCATCTTTCACTTCCACCGGTTAAGCTTCACTGCAGCATGCTTGCTGAAGATGCTATTAAAGCTGCTGTCAAGGACTATGAAGCTAAGCGTGCTAAGGCAACAACAACTGCAGAGAACGCTGCCAATGCTTGA 489 0.4765 MLRLVAKKLLGTPTASSTVRVLPRFYHERVVDHYNNPRNVGSFDKKDPTVGTGLVGAPACGDVMKLQIKVDDKTGKIVDARFKTFGCGSAIASSSVATEWVKGKQMEEVLSIKNTEIAKHLSLPPVKLHCSMLAEDAIKAAVKDYEAKRAKATTTAENAANA 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal14g1515 162 PANTHER IRON-SULFUR CLUSTER ASSEMBLY ENZYME NIFU HOMOLOG 15 159 IPR002871 GO:0005506|GO:0016226|GO:0051536
Lal14g1515 162 TIGRFAM iscU: FeS cluster assembly scaffold IscU 26 149 IPR011339 GO:0005506|GO:0016226|GO:0051536
Lal14g1515 162 Gene3D - 25 162 - -
Lal14g1515 162 CDD IscU_like 26 141 IPR002871 GO:0005506|GO:0016226|GO:0051536
Lal14g1515 162 SUPERFAMILY SufE/NifU 25 150 - -
Lal14g1515 162 Coils Coil 142 162 - -
Lal14g1515 162 Pfam NifU-like N terminal domain 26 151 IPR002871 GO:0005506|GO:0016226|GO:0051536
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal14g1515 Lal-Chr14 15987137 15989057 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal14g1515 K22068 - gmx:100806169 253.447
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal14g1515 14 15987137 15989057 Lal7g0919 7 15638327 15640388 LSH
Lal14g1515 14 15987137 15989057 Lal19g1077 19 14489845 14492021 LSH
Lal14g1515 14 15987137 15989057 Lal17g0913 17 7065986 7068285 PCT
Lal17g0913 17 7065986 7068285 Lal14g1515 14 15987137 15989057 PCT