Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal19g1024 ATGACGAGTCTAGGTGGTTCTTCTCCAAACAGAGCTTTGCCAAATAGCCCGAAGGGAAAGAAGAAAAGATCTGAGTATACTTCTAGAAGATCATTTCCTCGCACCACGGGAGACCGAACAGTGAAATCATTGCGACTTTCGAAGGCCTTGACAGTACCTGAATCAACAACCGTCCATGAAGCCTGCCGTCGTATGGCTGCCCGCAGAGTAGACGCCCTATTATTAACTGATTCCAGTGCTTTGCTTTGTGGAATCCTCACAGACAAGGATATAACAAGACTTATTGCTAGTGAGGTTGATCTTGAAGAAACACCTGTTTCCAAGGTTATGACAAGGAACCCAGTATTTGTCCTTTCTGACACTCTTGCTGTGGAAGCCCTTCAAAAGATGGTTCAAGGGAGATTCAGACATTTACCTGTAGTAGAGAATGGAGAAGTGGTGGCCATTCTTGACATAGCTAAGTGTTTGTATGATGCCATTGCCCGTATGGAAAGGGCAGCTGAGAAAGGAAAGGCAATTGCAGCAGCTGTCGAAGGTATTGAAAAACACTGGACAACATCTGCTTCTCCTTCTGGCTCCACTTCATCATTCATTGAGCTTCTTCGGGAGCAGATATTCAAGCCATCATTGTCTACAATCATTCCTGATAATTCAAAGGTTGTAACAGTTTCACCTACAGACTCAGTTTTGACAGCAGCAAAGAAGATGGTTGAACTTCCTGCCAGTTCTGCTATTGTGACAGTTGATGATAATCCTTGTGGTATCCTTACTTCGAAGGATATATTGATGCGGGTAATAGCACAAAATCTCCCTCCATCATCAACTCTTGTTGAGAAGGCCATGACTCCAAATCCAGAATGTGCAATAATTGATACACCAATTGTTGATGCACTTCACAAAATGCATGATGGAAAGTTTTTGCATCTTCCTGTGGTTGATAGAGATGGTGTTGTTGTTGCTACACTTGATGTGATTCATATCACACATGCTGCTGTGGCGACAGCAAGTCAGGCTGGAAATACTACCAGTTTGAACAATGAAGCTGCCAACTCCATGATTCAAAAATTTTGGGATTCTGCAATGTCCTTGACTCCAAATGAAGATGAGGATGATGGACAAAGTGACACGTCCACGAAAATGGCTTCTGAGGGAGGAGAAACAGGGAGATGCACCTCCTGTACTTCGTCAGGCATGTCAAGTGCATTTTCCTTCAAAATAGAGGATAAGAAGGGCAGATTGCATAGATTCACATGTGAAACTCAGAGCTTGACAGAGGTTATAACTTCCATCATTCAGAGGGTCGGTGATGATATTAACCCCAATAACCTTCCCCAGATTATGTATGAGGACGAAGAACATGATAAAGTTGTACTGGCTTCAGATAGTGATCTTGCCGCAGCTGTGGACCATGCAAAGAAGGCTAATTTGAAGGGATTAAGATTGCATTTAGACTACTCAGGAACACATGATTACGCAAGAGATCGTAGTTCAGGAAGTTTGGAACATTTTGATTCAGAAATATGGGCCGCAGCATATAGTGCTGTTGCCGCTGGAGCTGCAGTTGCTGCTGGCTTAGGCCTATTAGCATTCATAAAACGAAGAAAATGA 1608 0.4322 MTSLGGSSPNRALPNSPKGKKKRSEYTSRRSFPRTTGDRTVKSLRLSKALTVPESTTVHEACRRMAARRVDALLLTDSSALLCGILTDKDITRLIASEVDLEETPVSKVMTRNPVFVLSDTLAVEALQKMVQGRFRHLPVVENGEVVAILDIAKCLYDAIARMERAAEKGKAIAAAVEGIEKHWTTSASPSGSTSSFIELLREQIFKPSLSTIIPDNSKVVTVSPTDSVLTAAKKMVELPASSAIVTVDDNPCGILTSKDILMRVIAQNLPPSSTLVEKAMTPNPECAIIDTPIVDALHKMHDGKFLHLPVVDRDGVVVATLDVIHITHAAVATASQAGNTTSLNNEAANSMIQKFWDSAMSLTPNEDEDDGQSDTSTKMASEGGETGRCTSCTSSGMSSAFSFKIEDKKGRLHRFTCETQSLTEVITSIIQRVGDDINPNNLPQIMYEDEEHDKVVLASDSDLAAAVDHAKKANLKGLRLHLDYSGTHDYARDRSSGSLEHFDSEIWAAAYSAVAAGAAVAAGLGLLAFIKRRK 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal19g1024 535 MobiDBLite consensus disorder prediction 1 40 - -
Lal19g1024 535 MobiDBLite consensus disorder prediction 362 398 - -
Lal19g1024 535 ProSiteProfiles CBS domain profile. 45 101 IPR000644 -
Lal19g1024 535 SUPERFAMILY CAD & PB1 domains 393 494 - -
Lal19g1024 535 ProSiteProfiles CBS domain profile. 281 342 IPR000644 -
Lal19g1024 535 MobiDBLite consensus disorder prediction 377 398 - -
Lal19g1024 535 Pfam CBS domain 217 263 IPR000644 -
Lal19g1024 535 Pfam CBS domain 47 96 IPR000644 -
Lal19g1024 535 Pfam CBS domain 106 150 IPR000644 -
Lal19g1024 535 Pfam CBS domain 277 322 IPR000644 -
Lal19g1024 535 CDD PB1_MUG70 402 486 - -
Lal19g1024 535 PANTHER AMP-ACTIVATED PROTEIN KINASE, GAMMA REGULATORY SUBUNIT 19 523 - -
Lal19g1024 535 Gene3D - 20 175 IPR046342 -
Lal19g1024 535 ProSiteProfiles PB1 domain profile. 399 486 IPR000270 GO:0005515
Lal19g1024 535 CDD CBS_pair_MUG70_2 217 333 - -
Lal19g1024 535 Gene3D - 208 351 IPR046342 -
Lal19g1024 535 SUPERFAMILY CBS-domain pair 38 152 IPR046342 -
Lal19g1024 535 Pfam PB1 domain 402 484 IPR000270 GO:0005515
Lal19g1024 535 PANTHER CBS DOMAIN-CONTAINING PROTEIN CBSCBSPB4-RELATED 19 523 IPR034896 -
Lal19g1024 535 ProSiteProfiles CBS domain profile. 213 273 IPR000644 -
Lal19g1024 535 SUPERFAMILY CBS-domain pair 218 331 IPR046342 -
Lal19g1024 535 Gene3D - 407 483 - -
Lal19g1024 535 SMART PB1_new 401 486 IPR000270 GO:0005515
Lal19g1024 535 ProSiteProfiles CBS domain profile. 110 168 IPR000644 -
Lal19g1024 535 SMART cbs_1 219 266 IPR000644 -
Lal19g1024 535 SMART cbs_1 48 96 IPR000644 -
Lal19g1024 535 SMART cbs_1 113 157 IPR000644 -
Lal19g1024 535 SMART cbs_1 284 332 IPR000644 -
Lal19g1024 535 CDD CBS_pair_MUG70_1 46 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal19g1024 Lal-Chr19 14093150 14099249 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal19g1024 - - gmx:100783514 759.214
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal14g1454 14 15658392 15663615 Lal19g1024 19 14093150 14099249 LSH
Lal17g0839 17 6285043 6291298 Lal19g1024 19 14093150 14099249 PCT