Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal14g1454 ATGACAAGTCTAAGTGGTTCTTCTCCAGAGGGAAAGAAGAAAAGATCTGAGTATACAGGGCCTGAATATACTTCTAGAAAATCATTTCCTCGAACCACAGGAGAACGAACAGTGAAATCATTGCGGCTTTCAAAGGCATTGACAATACCTGAATCAACAACTGTCCATGAAGCTTGCCGTCGTATGGCTTCCCGCAGAGTAGATGCTGTATTACTAACTGATTCCAATGCTTTGCTTTGTGGAATCCTCACAGACAAGGATATAACAACAAGAGTTATTGCTAGTGAGATTGATCTTGAAGAAACACCTGTTTCCAAGGTTATGACAAGGAACCCAGTATTTGTCCTTTCTAACACTCTTGCTGTGGAAGCCCTCCAAAAGATGGTGCAAGGGAGATTCAGACATTTACCTGTGGTTGAGAATGGAGAAGTGGTAGCCATTCTTGACATAGCTAAGTGTTTATATGATGCCATTGCCCGTATGGAAAGGGCAGCTGAGAAAGGAAAAGCAATTGCAGCAGCTGTTGAAGGTATTGAAAAACACTGGGGAACATCTGCTTCTGCTTCTGGCTCCAATTCATCATTCATTGAAACTCTTCGGGAGCAGATATTCAAGCCATCATTGTCTACAATCATTCCTGAGAATTCAAAGGTTGTAACAGTTTCACCTACAGATTCAGTTTTGACAGCAGCAAAGAAGATGGTTGATCTTCCTGCAAGTTATGCTATTGCGATAGTTGACGACAAACCTTGTGGTATCCTTACAATAATCTCATTGGACTATAATCTGCATACAAATTTCAGTTCAAATGATATATTGATGCGGGTAATAGCACAAAATCTTCCTCCATCGTCAACTCTTGTTGAGAAGGCCATGACTCCAAATCCAAAATGTGCGATAGTTGATACACCAATTGTTGATGCACTTCATACAATGCATGATGGAAAGTTTTTACATCTTCCCGTAGTTGATAGAGATGGTGTTGTTGTTGCTACACTTGATGTGATTCATATCACACATGCTGCTGTGGCGACAGCGAGTCAGGCTGGAAATACTGCCAATTTGAACAGTGAAACTGCCAACTCCATGATTCAAAAATTTTGGGATTCGGCCATGGCCTTGAGCCCAAATGAAGACGAGGAGGATGAACAAAGTGAGATGTCCATGAAAATGGTTTCTGAGGGAGGAGAAACATTGAGATGCGCTTCCTGTATTTCATCCAGCATGTCGCAAGCATTTTCCTTCAAGATAGAGGATAAGAAGGGAAGATTGCATAGATTCACATGTGAAACTCGGAGCTTGACAGAGGTTATCACTTCCATTATTCAGAAAGTTGGTGATGATATTAACCCCAAGAACCTGCCCCAAATTATGTATGAAGACGAAGAACATGACAAAGTTGTACTGGCTTCAGATAGCGATCTAGCTGCAGCTGTGGACCATGCAAAGAATGCTGGTTTGAAGGGACTGAGATTGCATCTAGACTACTCTGGAACGCATGATCGTGCAAAAGATTATGGTTCGGGAAGTTTGGATTATGTTGATTCAGAAGTAAGGCCCTTGGCATATGCTGTTGTTGTCGCTGGAACTGCAATTATTGCTGGCTTAGGCCTACTAGCATTCATCAAACGAAGATAA 1638 0.4176 MTSLSGSSPEGKKKRSEYTGPEYTSRKSFPRTTGERTVKSLRLSKALTIPESTTVHEACRRMASRRVDAVLLTDSNALLCGILTDKDITTRVIASEIDLEETPVSKVMTRNPVFVLSNTLAVEALQKMVQGRFRHLPVVENGEVVAILDIAKCLYDAIARMERAAEKGKAIAAAVEGIEKHWGTSASASGSNSSFIETLREQIFKPSLSTIIPENSKVVTVSPTDSVLTAAKKMVDLPASYAIAIVDDKPCGILTIISLDYNLHTNFSSNDILMRVIAQNLPPSSTLVEKAMTPNPKCAIVDTPIVDALHTMHDGKFLHLPVVDRDGVVVATLDVIHITHAAVATASQAGNTANLNSETANSMIQKFWDSAMALSPNEDEEDEQSEMSMKMVSEGGETLRCASCISSSMSQAFSFKIEDKKGRLHRFTCETRSLTEVITSIIQKVGDDINPKNLPQIMYEDEEHDKVVLASDSDLAAAVDHAKNAGLKGLRLHLDYSGTHDRAKDYGSGSLDYVDSEVRPLAYAVVVAGTAIIAGLGLLAFIKRR 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal14g1454 545 CDD CBS_pair_MUG70_1 43 159 - -
Lal14g1454 545 MobiDBLite consensus disorder prediction 1 35 - -
Lal14g1454 545 SMART PB1_new 412 497 IPR000270 GO:0005515
Lal14g1454 545 ProSiteProfiles CBS domain profile. 108 166 IPR000644 -
Lal14g1454 545 Gene3D - 205 362 IPR046342 -
Lal14g1454 545 SUPERFAMILY CBS-domain pair 35 151 IPR046342 -
Lal14g1454 545 PANTHER CBS DOMAIN-CONTAINING PROTEIN CBSCBSPB4-RELATED 23 533 IPR034896 -
Lal14g1454 545 Gene3D - 19 173 IPR046342 -
Lal14g1454 545 ProSiteProfiles PB1 domain profile. 410 497 IPR000270 GO:0005515
Lal14g1454 545 PANTHER AMP-ACTIVATED PROTEIN KINASE, GAMMA REGULATORY SUBUNIT 23 533 - -
Lal14g1454 545 ProSiteProfiles CBS domain profile. 42 99 IPR000644 -
Lal14g1454 545 Pfam CBS domain 215 256 IPR000644 -
Lal14g1454 545 Pfam CBS domain 104 148 IPR000644 -
Lal14g1454 545 Pfam CBS domain 288 333 IPR000644 -
Lal14g1454 545 Pfam CBS domain 44 89 IPR000644 -
Lal14g1454 545 SMART cbs_1 295 343 IPR000644 -
Lal14g1454 545 SMART cbs_1 45 93 IPR000644 -
Lal14g1454 545 SMART cbs_1 111 155 IPR000644 -
Lal14g1454 545 SMART cbs_1 217 264 IPR000644 -
Lal14g1454 545 Pfam PB1 domain 413 495 IPR000270 GO:0005515
Lal14g1454 545 SUPERFAMILY CAD & PB1 domains 405 501 - -
Lal14g1454 545 CDD PB1_MUG70 413 497 - -
Lal14g1454 545 Gene3D - 415 494 - -
Lal14g1454 545 ProSiteProfiles CBS domain profile. 292 350 IPR000644 -
Lal14g1454 545 SUPERFAMILY CBS-domain pair 216 341 IPR046342 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal14g1454 Lal-Chr14 15658392 15663615 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal14g1454 - - gmx:100783514 756.133
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal14g1454 14 15658392 15663615 Lal19g1024 19 14093150 14099249 LSH
Lal17g0839 17 6285043 6291298 Lal14g1454 14 15658392 15663615 PCT