Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g1572 ATGGAGGAAGCGCCCACAAATTCTATTATGTGGAAAGCGAAGAGCGCCTTCCATTCCGCAGCTTCAAAAGCGGAACGTGTCTTCAAATCTAATCCAGATCGTGAGAACAATAAGGAATTCAAAAACAACGTGATCGCGCAACCGGAACATCTTGATTCTTCTCACAACCACAACTTTTTCAAGCTTCCCAGTGAACTGAAGTACATAAAGTGGAGGCCTCCACATACAGGAATAAAACAGGATTGGCAAGATAGAATTAAGAACATCCAGATAGGAAAAAAAGAAGTCAAAGATATAGATATAGTTGGGGAGACAAACATGGCAATTCCATTTTATGATGAAAACTTGTTCATGCTGAATATGAAAAATGATCTTGAGGCCAAGGCTTCAGAGGCAATTCCCTCGGTTGAAAGCTTAGCTGCTGCAACTAAAGATCCCATTCCTCCGTCATCGGTACTGAAGCAATTGGCTACTGCTGTTCAGGCTGGAAGTAAAACAAAGTCCATGAAAGATTTTATAGCTTCACCAGGAAGTTCTTCTCCTGCCATGGAGAGGGCTGCCTCAATTCTTTCTGCAGTAAAAGTGTTGTGTGAAAAGGAGGACAAACTAACCTCTGACTTTAGTAATAATGAGAGAGTTTTGCATCTGATTAGTTCTCTATTTGATCCAGAGGGAGATTTTCTCAAAAGGAAGATCAACTCCAATCCTGAAGAACCTTCCATAGCATTTTTGCCAAGAGATATTCATGGTTCTCCTCCTGAAAGCCTTGTTGTTAAGCTAGCTGAAGTCATTGGAAACTTCAATACTGTTCGTAAGATGGCACTTTTCTGGAGCAGAGTTATTGTTGAACTAAGAAAACTTTGGTCTGAAGAACAAGAATTACCTGGAGTCCCACGGGATGCGATCCCAGATCTCAAGTCATGTCTTCTATATCAACAGTTTCAAGTAATTAATTGTTGCATCTCTCGGAAAAGGCTCCACGTTATTGCAACCGAATCTCTAGAGTGTATGATGAAGGAAGCAAACTCAATTATAAAACACTCAGCTAAGTATAATGACGGAAGTCCAACAAGTCCTGTTCTATATGCTAGATTAAATACCGGGGAGCTTGTTCTTCGAATTGGTGCAGATTGCCCGGCTGGAGATCTGACATTGTTGGAAACTGGTGAGCCTGTGTACTCTCCTTTCACCCAGGAAGGACCTCTACTTACAGAAGATCTAATCAGAGAACACGAGGAGTTTGTGCTGAGGACAGGGAGTGTTGGTGCTGGGTGCTCTCAACTCCTCTCCGATATGCAGGCTTTCAAGGCTGCAAATCCTGGATGTATTTTGGAGGATTTTGTAAGATGGCACTCTCCTCCTGATTGGTCAGAAAATGAAGCAACTACTGAGGATAGTGATGTTATTTATGGTGGTGAGTTGTCTACAAGAGGTCAGCTAAGTCTGCGAATGCGAAAGGAAGGTAATTTGTGGCGTCAATTGTGGGAAGCTTCTAAACCAGTACCTGCTGTTAAACAGGCACCTCTATTTGATGAGGATTTGGCTGTGGAGGGTATTCTCAATGCATTTGAGGACATCCATCCTTCAGAGCTTTTTGGGCAGCTGTTTGTTTCTTTACTTGGTTTAGGATTTACAATTGCTGAATCTATGCTGTTCGGCAACAATGACTTGTCAAAGTTGTTCTACGACTGCAAAGAGTATGTAGTTGCCACATGTCAAAGCAGCAACTGGTGTGAGAAAGTTGATGACCTTGTTCAGGTATATGAAACAGTGGAGACAATTTTACTGAATCCTGAAGAATCACTAAAGATGATAAAGCAAACAGAAGAAGCAACCATGACTAGCGGAGAACCAAAAGGCCGATTTAAGAGGCTCGGCCTTATATTTGGTGGCAAAATATACTATGGAGAAAACCTGTATCAAATGATCAGATAA 1935 0.4176 MEEAPTNSIMWKAKSAFHSAASKAERVFKSNPDRENNKEFKNNVIAQPEHLDSSHNHNFFKLPSELKYIKWRPPHTGIKQDWQDRIKNIQIGKKEVKDIDIVGETNMAIPFYDENLFMLNMKNDLEAKASEAIPSVESLAAATKDPIPPSSVLKQLATAVQAGSKTKSMKDFIASPGSSSPAMERAASILSAVKVLCEKEDKLTSDFSNNERVLHLISSLFDPEGDFLKRKINSNPEEPSIAFLPRDIHGSPPESLVVKLAEVIGNFNTVRKMALFWSRVIVELRKLWSEEQELPGVPRDAIPDLKSCLLYQQFQVINCCISRKRLHVIATESLECMMKEANSIIKHSAKYNDGSPTSPVLYARLNTGELVLRIGADCPAGDLTLLETGEPVYSPFTQEGPLLTEDLIREHEEFVLRTGSVGAGCSQLLSDMQAFKAANPGCILEDFVRWHSPPDWSENEATTEDSDVIYGGELSTRGQLSLRMRKEGNLWRQLWEASKPVPAVKQAPLFDEDLAVEGILNAFEDIHPSELFGQLFVSLLGLGFTIAESMLFGNNDLSKLFYDCKEYVVATCQSSNWCEKVDDLVQVYETVETILLNPEESLKMIKQTEEATMTSGEPKGRFKRLGLIFGGKIYYGENLYQMIR 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g1572 644 PANTHER RAB3 GTPASE-ACTIVATING PROTEIN CATALYTIC SUBUNIT 6 632 - -
Lal18g1572 644 Pfam Rab3 GTPase-activating protein catalytic subunit 373 524 IPR026147 -
Lal18g1572 644 PANTHER RAB3 GTPASE-ACTIVATING PROTEIN CATALYTIC SUBUNIT 6 632 IPR045700 GO:0005096|GO:0043547
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g1572 Lal-Chr18 17352298 17362025 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g1572 K18270 - gmx:100818643 922.924
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal18g1572 18 17352298 17362025 Lal18g1572 18 17352298 17362025 ECH
Lal3g0878 3 8409644 8421682 Lal18g1572 18 17352298 17362025 LSH
Lal18g1572 18 17352298 17362025 Lal22g0079 22 489145 496329 LSH
Lal3g0878 3 8409644 8421682 Lal18g1572 18 17352298 17362025 PCT
Lal18g1572 18 17352298 17362025 Lal18g1572 18 17352298 17362025 PCT
Lal18g1572 18 17352298 17362025 Lal22g0079 22 489145 496329 PCT
Lal18g1572 18 17352298 17362025 Lal3g0878 3 8409644 8421682 PCT
Lal22g0079 22 489145 496329 Lal18g1572 18 17352298 17362025 PCT