Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g0582 ATGAAAGAACATCATTTTGTGTTGTGCATGAGAGTGAGGAAAAGTAACCTACCTTTCGGAAATATCAAGGTTGTTCCTCTCCCTATTAACAACACAAATAACACTTGTCATTTTTTTCAACCACCATTCTCTCTCTCTCTCTCTCTTCTTATGGCTACGCTTTATTCAACGCAGTGTCGTTTACATCCATCACTTCAATCCTCTTTTTCTTCTTCTTCGTCGTCGTTTATTCAATGCGTAACCTTCTCTTCATCTCCAAAGCGTTTTGTTGCAGCTGAATCCTCTCTTAAATCTCAACCCGGTTCCCATCATATTCCGGTTCAGACCCATCAACATCACGGTGCCGCTGCTGCCACAGTAGCGCCCATTGAAAATGACACTTTTATCGAGGGATTGAAATCTAAATTATCGTCAGTTACGTCATTGGAGGAGCCTCTAGGTGAAGTTGGTTTTGAAAAAGATGAAAATGAGTCCACTGTTAGTATTACTGTTGTTGGAGCCTCCGGGGACCTTGCCAAGAAGAAGATATTTCCAGCCCTCTTTGCACTTCATTATGAGGGTTGTCTCCCTAAGAACTTCACGATTTATGGTTATGCTCGAAGTAAGATGACAAATGCAGAGCTGAGAAATATGGTTAGCAAGACCCTCACTTGTAGAATTGATAAGAGTGAGAACTGCAGTGAAAAGATGGACGAATTTCTTAAAAGATGTTTCTACCATTCTGGTCAGTATGATTCTCCGGAAAACTTTGCAGCGCTAGACAAAAAACTGAAGGAACATGAGGGTGGGAGAATTTCTAATCGCTTGTATTATCTATCAATTCCTCCTAATATATTCATAGATGCTGTAAAATGTGCAAGCTTGTCAGCTTCTTCGGGTAATGGTTGGACCAGGGTCATTGTCGAGAAGCCATTTGGCCGTGATTCAGACTCTTCGGCCGCTTTAACGAGATCGCTTAAGCAGTATCTGACAGAGGATCAGATTTTCAGGATTGACCATTATCTTGGGAAAGAGCTTGTGGAAAACCTTTCTGTTCTCCGATTCTCAAATCTCATTTTTGAACCATTATGGTCAAGGCAGTATATAAGAAATGTACAATTGATATTCTCAGAAGACTTCGGCACTGAAGGACGTGGCGGGTACTTCGATAATTATGGTATAATAAGAGACATTATGCAGAATCATTTACTACAAATATTGGCCCTCTTTGCAATGGAAACTCCTGTTAGTTTGGATGCAGAGGATATTAGAAATGAAAAGGTCAAGGTTCTTCGTTCAATGAGGCCTATACGACTTGAGGATGTGGTTGTAGGCCAGTACAAGGGCCACACTAGAGGAGGTGTTACATATCCGGCCTACACCGATGACAAAACTGTACCAAAGGACAGCTTAACTCCAACATTTGCTGCAGCTGCCCTCTTCATAGATAATGCAAGATGGGATGGGGTTCCTTTTTTGATGAAAGCTGGAAAAGCATTACATAGCAAGGGAGCTGAGATTCGGGTGCAGTTCAGGCATGTGCCAGGCAATCTGTACAATAGGAATATTGGAAGTGATCTTGATCGGGCTACGAACGAACTTGTTATACGAGTTCAGCCTGATGAGGCTATTTATTTGAAGATCAACAACAAAGTGCCAGGCTTGGGAATGAGGTTGGACCGCAGTAAGCTGAATCTTCACTATGCCGCAAGATATTCAACGGAGATTCCAGATGCTTACGAGAGACTACTTCTTGATGCTATTGAAGGAGAAAGAAGACTCTTTATACGTAGTGATGAACTTGATGCTGCTTGGTCATTGTTTACACCTGTACTGAATGAGCTAGAAGAGAAACATGTAATCCCAGAATACTATCCCTATGGTAGTCGTGGTCCTGTTGGTGCTCATTATCTTGCAGCCAAGCACAAGGTACGGGGTAGGGATGAGACAGTAAGGAGTGTGAGGATGTTTCATGTAGTTGGAAATAAATCCATACCCACAATGGATTTTTGGTGCTCTTCTTTCTCCATGGATGATGAATTCAAGAAGCTGGTCATTAGAATGAACCCTCCAAGAGTTACTCTAGATAACAATTCAAGTGAAACAGCCACTCTGATCAAGGTTGATAGTGCAAACAAGCATGGAATCTTGTTGGAATTGGTTCAGATTCTGATTGATATGAATCTCATTATAAGAAGAGCTTACATTTCCTCTGATGGTGGATGGTTCATGGATGTTTTTCATGTTACTGATCAAAATGGAAATAAGATTCTTCAAGACGATGTAGCTGACCGTATTCAACAGTCATTGGGTTCGAAAGGCCATAGTTTCCTGTCATTGAGAAAATCAGTTGATTTCCAAGCTGCAGCAGAACATACTACCATTGAATTAACCGGACGAGATAGGCCAGGATTGCTTTCAGAGATTTTTGCTGTTTTAGCAGACCTCAAATGCAATGTGATAGCAGCAGAAGTATGGACACACAATTCAAGAATGGCATCGGTTGTTTACATCGCGGACGAGGCAACTGGATTGTCAATTGTTAATCCAGATCGCCTTGCTAAGATTAAGCAGCTTCTATTATATGTGCTGAATGGAGACATAGATAAGAGGAGTGTCAACACTGCTGTTTCTGTTGGTTCTACTCATAAAGAAAGGAGGCTGCATCAAATGATGTATGCGGATCGCGATTATGACATATATGATGTGGATAATCGATCATCAATTGACAAAAACAACCTCAATCTCGATGTGACTGTTGATGATTGTGCAGATAAGGGATACACTGTGGTGAATTTGAAGTGTCCAGACAGACCAAAATTACTATTTGACACTATGTGCACAATCACAGACATGCAATATGTTGTATACCATGGAACTGTCATTGCTGAAGGACCAGAGGCATACCAGAACAGAATGGTTTATGACATGGGTAAAGGCTTTGTTGTTGATTACATATCATGGTTTAGATTGGTTTCCTTATTCTTTAATGGTATCAAAGCGGCCACCAACATATGTCAGTCCTGTAAACTTCACGCTCCAGATGAATACTATATAAGACATGTGGATGGATGTCCTATCAATTCTCAAGCAGAAAGGCAAAGAGTAATTCACTGCTTGGAGGCTGCAATTAGGAGAAGAAGTTCTGAGGGCACACAGTTAGAACTCCATGGTGAAGACAGGGTTGGCCTTTTATCATATGTAACTCGCATTTTTCGTGAAAACGGCCTTTCATTCATTCGTGCCGAGATTACAACCAAGGATTCCAAGGCCATGAGTGTTTTTTATGTAACTGATGCATCAGGAATTCCAGTTAAGAGTGAAACAATTGAGGCAATTCGTAAAGAGATTGGCTTAACCACAATGCATGTAAAAGAAGATATCTACTCAAAATCTAAATCCAAAGAGAAAGGAACATTCTCTTTTTGTAATCTGTTTCTATCAAGCTCTGAGAAGTTTCTTTACAACTTAGGATTCTTCAAGTCTTGTTCTTGA 3474 0.4076 MKEHHFVLCMRVRKSNLPFGNIKVVPLPINNTNNTCHFFQPPFSLSLSLLMATLYSTQCRLHPSLQSSFSSSSSSFIQCVTFSSSPKRFVAAESSLKSQPGSHHIPVQTHQHHGAAAATVAPIENDTFIEGLKSKLSSVTSLEEPLGEVGFEKDENESTVSITVVGASGDLAKKKIFPALFALHYEGCLPKNFTIYGYARSKMTNAELRNMVSKTLTCRIDKSENCSEKMDEFLKRCFYHSGQYDSPENFAALDKKLKEHEGGRISNRLYYLSIPPNIFIDAVKCASLSASSGNGWTRVIVEKPFGRDSDSSAALTRSLKQYLTEDQIFRIDHYLGKELVENLSVLRFSNLIFEPLWSRQYIRNVQLIFSEDFGTEGRGGYFDNYGIIRDIMQNHLLQILALFAMETPVSLDAEDIRNEKVKVLRSMRPIRLEDVVVGQYKGHTRGGVTYPAYTDDKTVPKDSLTPTFAAAALFIDNARWDGVPFLMKAGKALHSKGAEIRVQFRHVPGNLYNRNIGSDLDRATNELVIRVQPDEAIYLKINNKVPGLGMRLDRSKLNLHYAARYSTEIPDAYERLLLDAIEGERRLFIRSDELDAAWSLFTPVLNELEEKHVIPEYYPYGSRGPVGAHYLAAKHKVRGRDETVRSVRMFHVVGNKSIPTMDFWCSSFSMDDEFKKLVIRMNPPRVTLDNNSSETATLIKVDSANKHGILLELVQILIDMNLIIRRAYISSDGGWFMDVFHVTDQNGNKILQDDVADRIQQSLGSKGHSFLSLRKSVDFQAAAEHTTIELTGRDRPGLLSEIFAVLADLKCNVIAAEVWTHNSRMASVVYIADEATGLSIVNPDRLAKIKQLLLYVLNGDIDKRSVNTAVSVGSTHKERRLHQMMYADRDYDIYDVDNRSSIDKNNLNLDVTVDDCADKGYTVVNLKCPDRPKLLFDTMCTITDMQYVVYHGTVIAEGPEAYQNRMVYDMGKGFVVDYISWFRLVSLFFNGIKAATNICQSCKLHAPDEYYIRHVDGCPINSQAERQRVIHCLEAAIRRRSSEGTQLELHGEDRVGLLSYVTRIFRENGLSFIRAEITTKDSKAMSVFYVTDASGIPVKSETIEAIRKEIGLTTMHVKEDIYSKSKSKEKGTFSFCNLFLSSSEKFLYNLGFFKSCS 1157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g0582 1157 PRINTS Glucose-6-phosphate dehydrogenase signature 298 311 IPR001282 GO:0006006|GO:0016614|GO:0050661
Lal18g0582 1157 PRINTS Glucose-6-phosphate dehydrogenase signature 322 350 IPR001282 GO:0006006|GO:0016614|GO:0050661
Lal18g0582 1157 PRINTS Glucose-6-phosphate dehydrogenase signature 374 391 IPR001282 GO:0006006|GO:0016614|GO:0050661
Lal18g0582 1157 PRINTS Glucose-6-phosphate dehydrogenase signature 392 408 IPR001282 GO:0006006|GO:0016614|GO:0050661
Lal18g0582 1157 PRINTS Glucose-6-phosphate dehydrogenase signature 479 505 IPR001282 GO:0006006|GO:0016614|GO:0050661
Lal18g0582 1157 PANTHER GLUCOSE-6-PHOSPHATE 1-DEHYDROGENASE G6PD 81 641 IPR001282 GO:0006006|GO:0016614|GO:0050661
Lal18g0582 1157 Pfam ACT domain 1046 1106 IPR002912 -
Lal18g0582 1157 Pfam ACT domain 786 834 IPR002912 -
Lal18g0582 1157 Gene3D Dihydrodipicolinate Reductase; domain 2 331 639 - -
Lal18g0582 1157 Gene3D - 156 330 - -
Lal18g0582 1157 ProSiteProfiles ACT domain profile. 698 778 IPR002912 -
Lal18g0582 1157 Hamap Glucose-6-phosphate 1-dehydrogenase [zwf]. 159 641 IPR001282 GO:0006006|GO:0016614|GO:0050661
Lal18g0582 1157 SUPERFAMILY Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 332 638 - -
Lal18g0582 1157 SUPERFAMILY ACT-like 694 765 IPR045865 -
Lal18g0582 1157 ProSitePatterns Glucose-6-phosphate dehydrogenase active site. 332 338 IPR019796 GO:0004345|GO:0006006
Lal18g0582 1157 Pfam Glucose-6-phosphate dehydrogenase, C-terminal domain 345 636 IPR022675 GO:0004345|GO:0006006|GO:0050661
Lal18g0582 1157 Gene3D - 785 856 - -
Lal18g0582 1157 CDD ACT_ACR_3 921 1040 - -
Lal18g0582 1157 Pfam Glucose-6-phosphate dehydrogenase, NAD binding domain 164 342 IPR022674 GO:0006006|GO:0016614|GO:0050661
Lal18g0582 1157 ProSiteProfiles ACT domain profile. 787 864 IPR002912 -
Lal18g0582 1157 PANTHER GLUCOSE-6-PHOSPHATE 1-DEHYDROGENASE 2, CHLOROPLASTIC 81 641 - -
Lal18g0582 1157 ProSiteProfiles ACT domain profile. 1046 1123 IPR002912 -
Lal18g0582 1157 TIGRFAM zwf: glucose-6-phosphate dehydrogenase 160 636 IPR001282 GO:0006006|GO:0016614|GO:0050661
Lal18g0582 1157 CDD ACT_ACR_1 696 767 - -
Lal18g0582 1157 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 158 345 IPR036291 -
Lal18g0582 1157 SUPERFAMILY ACT-like 784 853 IPR045865 -
Lal18g0582 1157 SUPERFAMILY ACT-like 1042 1111 IPR045865 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g0582 Lal-Chr18 4949605 4959326 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g0582 K00036 - gmx:100793694 981.859
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal18g0582 18 4949605 4959326 Lal18g0582 18 4949605 4959326 ECH
Lal18g0582 18 4949605 4959326 Lal8g1317 8 16284151 16287924 ECH
Lal18g0582 18 4949605 4959326 Lal22g1334 22 16259745 16264468 LSH