Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g1317 ATGGATGATGAGTATGCTAAGCTTATAAGAAGGATGAACCCACCCAGGGTTGTGATCGACAATAATGCATGTGAAGATGCTACTGTTATTCAGGTAGACAGTGTCAACAAACATGGGATTCTGCTTGATGTTGTGCAAGTTCTGTCAGATATGAATCTTTTAATAACAAAGGCCTATATCTCCTCTGATGGGTTGTTTTTCATGGATGTGTTTAATGTGATTGATCGTAATGGAGACAAGATCAGAGATACGGAAATCATTGATTATATTCAGAGGAGACTTGAAAACAATCCAGGCTTTGCACCCTCTATGAGAGAGTCTGTCGGGGTTGTACCTTCTGAAGAGCACACCTCGATTGAACTAACTGGTATTGACAGACCTGGTTTACTATCCGAAGTCTGTGCTGTTCTCACCGACCTTCACTGTAATGTGGTGAATGCTGAGATATGGACACATAATAATAGAGCTGCAGCTGTAGTTCATGTGACAGATGACTCCACCGGGCACGCTATCAACAATCCGTCCCGACTCTCCACAATAAGGGACTTGCTTTGTAATGTTCTTCGGGGGAGCAGTGATCTAAAGACAGCAAGAATGACACTATCACCACCTGGAGTTACAAATTGGGATAGAAGATTACATCAGATTATGTTTGCCGACAGGGACTACGAAAAAAGGGCTGAAAGAGCAGGACAAAGGGGAAGTAGAGATGGAGATACAAGTTCGTTCCCTCATGTCGCTGTCATAGACTGTATTGAGAAAGATTACACTGTGGTTACCATGAGAGCAAAAGATAGGCCGAAATTATTGTTCGATATTGTTTGCACTTTAACAGACATGGAGTATGTAGTATATCATGGTGTTGTCCAGACAATAAGGACAGAGGCATATCAGGAGTTTTATATTCGGCATGTTGATGGCTTTCCCATAAGCTCAGAGGCTGAGCGAGAACGTCTTATACAGTGTCTTGAAGCAGCCATTGAAAGGCGAGCATCTGAGGGGATGGAGCTGGAGTTGAGCACAAAAGATCGTGTCGGACTACTCTCAGATATCACAAGGATATTCCGAGAGAACAGTTTATGTATCAAAAGAGCCGAAATATCAACAGAAAATGGAAAGGCAAAAGACACTTTTTATGTCACAGATGTGACAGGTAACCCAGTTGATCCCAAGATTATTGATTCAATTCGCAGGCAGATCGGCGATATGGCACTGCAGGTGAAGCATAACTCAAATCTTTCACAGAAGGCCTCTCCATCCACAATTGGGTTTCTCTTCGGAAACCTTTTCAAGGCTGGATCTTTTCAGAATTTTAAGTTGAACAGATCTTATTCTTAA 1338 0.4223 MDDEYAKLIRRMNPPRVVIDNNACEDATVIQVDSVNKHGILLDVVQVLSDMNLLITKAYISSDGLFFMDVFNVIDRNGDKIRDTEIIDYIQRRLENNPGFAPSMRESVGVVPSEEHTSIELTGIDRPGLLSEVCAVLTDLHCNVVNAEIWTHNNRAAAVVHVTDDSTGHAINNPSRLSTIRDLLCNVLRGSSDLKTARMTLSPPGVTNWDRRLHQIMFADRDYEKRAERAGQRGSRDGDTSSFPHVAVIDCIEKDYTVVTMRAKDRPKLLFDIVCTLTDMEYVVYHGVVQTIRTEAYQEFYIRHVDGFPISSEAERERLIQCLEAAIERRASEGMELELSTKDRVGLLSDITRIFRENSLCIKRAEISTENGKAKDTFYVTDVTGNPVDPKIIDSIRRQIGDMALQVKHNSNLSQKASPSTIGFLFGNLFKAGSFQNFKLNRSYS 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g1317 445 ProSiteProfiles ACT domain profile. 29 113 IPR002912 -
Lal8g1317 445 ProSiteProfiles ACT domain profile. 336 415 IPR002912 -
Lal8g1317 445 SUPERFAMILY ACT-like 24 95 IPR045865 -
Lal8g1317 445 Gene3D - 334 409 - -
Lal8g1317 445 Gene3D - 116 189 - -
Lal8g1317 445 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR6 1 437 - -
Lal8g1317 445 Pfam ACT domain 118 166 IPR002912 -
Lal8g1317 445 CDD ACT_ACR_2 117 190 - -
Lal8g1317 445 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED 1 437 IPR040217 -
Lal8g1317 445 CDD ACT_ACR_3 256 330 - -
Lal8g1317 445 ProSiteProfiles ACT domain profile. 118 199 IPR002912 -
Lal8g1317 445 SUPERFAMILY ACT-like 332 406 IPR045865 -
Lal8g1317 445 SUPERFAMILY ACT-like 113 186 IPR045865 -
Lal8g1317 445 SUPERFAMILY ACT-like 254 328 IPR045865 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g1317 Lal-Chr8 16284151 16287924 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g1317 - - gmx:100818506 761.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal8g1317 8 16284151 16287924 Lal8g1317 8 16284151 16287924 ECH
Lal18g0582 18 4949605 4959326 Lal8g1317 8 16284151 16287924 ECH