Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g1334 ATGGATTTTTGGTCTTCTTCTTTGTCTATGGATGATGAATTTCAAAAGCTGGTTACTAGAATGAATCCTCCAAGAGTTACTGTGGATAACAATTCAAGTAGAGCAACCACTTTGATAAAGGTTGATAGTGCAAATAAGCGTGGAAGCTTATTGGAAGTGATTCAGGTTTTGACTGATATGAATCTGATTATAAGAAGAGCTTACATTTCCTCTGATGGAGGATGGTTCATGGATGTTTTTCATGTTACTGATCAAAATGGGAAGAAATTTCTTCAAGAAGATGTAGCTGACAAGATTCAACAGTCACTAGTTTCAAGAGGCCGTAATTTTCAGTCATTGAGAAGATCTGTTGAGGTACAGGCTGCTGCAGAACATACTACCATCGAATTAACCGGTCAAGACAGGCCGGGATTGCTTTCGGAGGTTTTTGCGGTTCTAACAGACCTTAAATGCAATGTGATAGCAGCCGAAGTTTGGACTCACAATTCAAGAATGGCATCGGTTGTTTACATTGCCGATGAGGCTACTGGACTATCAATTGACAATCTCGACCGCCTTGCTAAGATTAAGCAGCTTCTACTCTATGTCCTGAATGGAGACATAGACAATAGGAGTGCCAACACTGCTGTTTCTGTTGATTCTACTCACAAGGAAAGGAGGCTGCATCAAATGATGTACGCCGATCGCGATTATGACATATACAATGTAGATAATGGGTCAGCAATTGGCAAGAACAATCTCTATGTAACTGTTGATGATTGTGCAGATAAAGGATACACTGTTGTGAACTTGAGATGTCCAGACAGACCAAAATTAATATTTGATACTGTTTGCACAATCACAGACATGCAATATGTTGTATACCATGGAACTGTCAATGCTGAAGGACCAGAGGCATATCAGGAATACTATATAAGACATGTGGATGGTTGTCCTATAAATTCTCAAGCAGAAAGGCAAAGAGTAATTAACTGCTTAGAAGCTGCTGTTAGGAGAAGAAGTTTTGAGGGCATACAGTTAGAACTTTGTGGTGAAGACAGGGTTGGCCTTCTATCGGATATAACTCGCATTTTTCGAGAAAATGGTCTTTCGGTTAATCGTGCTGAGATTGCAACAAGAGGTTCCAAGGCCATGAATGTTTTTTATGTAAATGATGCATCTGGAATTCAAGTTACAAGTGAAACAATTGAGGCAGTTCGAAAAGAGATTGGGATGATCACAATGCACGTGAAGGGAGATGTCTGCTCAAAATCTCAATCTCAGGAGAATGGAGCATTCGGTTTGCGTAATCTGTTTCGATCAAGATCGGCGAAGCTTCTTTACAACTTAGGTATAATGAAGTCTTGTCCTTGGATCTAA 1359 0.3988 MDFWSSSLSMDDEFQKLVTRMNPPRVTVDNNSSRATTLIKVDSANKRGSLLEVIQVLTDMNLIIRRAYISSDGGWFMDVFHVTDQNGKKFLQEDVADKIQQSLVSRGRNFQSLRRSVEVQAAAEHTTIELTGQDRPGLLSEVFAVLTDLKCNVIAAEVWTHNSRMASVVYIADEATGLSIDNLDRLAKIKQLLLYVLNGDIDNRSANTAVSVDSTHKERRLHQMMYADRDYDIYNVDNGSAIGKNNLYVTVDDCADKGYTVVNLRCPDRPKLIFDTVCTITDMQYVVYHGTVNAEGPEAYQEYYIRHVDGCPINSQAERQRVINCLEAAVRRRSFEGIQLELCGEDRVGLLSDITRIFRENGLSVNRAEIATRGSKAMNVFYVNDASGIQVTSETIEAVRKEIGMITMHVKGDVCSKSQSQENGAFGLRNLFRSRSAKLLYNLGIMKSCPWI 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g1334 452 ProSiteProfiles ACT domain profile. 339 417 IPR002912 -
Lal22g1334 452 ProSiteProfiles ACT domain profile. 38 118 IPR002912 -
Lal22g1334 452 ProSiteProfiles ACT domain profile. 127 204 IPR002912 -
Lal22g1334 452 SUPERFAMILY ACT-like 35 93 IPR045865 -
Lal22g1334 452 CDD ACT_ACR_3 259 333 - -
Lal22g1334 452 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED 3 448 IPR040217 -
Lal22g1334 452 SUPERFAMILY ACT-like 124 183 IPR045865 -
Lal22g1334 452 SUPERFAMILY ACT-like 337 404 IPR045865 -
Lal22g1334 452 Gene3D - 121 196 - -
Lal22g1334 452 Gene3D - 337 411 - -
Lal22g1334 452 Pfam ACT domain 126 174 IPR002912 -
Lal22g1334 452 Pfam ACT domain 340 399 IPR002912 -
Lal22g1334 452 PANTHER OS08G0515400 PROTEIN 3 448 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g1334 Lal-Chr22 16259745 16264468 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal22g1334 - - lang:109356971 846.654
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal18g0582 18 4949605 4959326 Lal22g1334 22 16259745 16264468 LSH