Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g1783 ATGATGTTGGTAATGAGAAAAAGACTAGCTTGTTGTTCCAGAAAAACCAAAATTAGCATTGATTTTGATGGGCATGAAAATAGGATTGTGACATACAATGACATTGAGAGTAGCATTGTTGATAATCAATCTGACAAAGATGAAAACAGAACTAGTAGAGGAGATGGATGTATAACCGATTCGTTTAACGACGAAGACTCGAGTTGTTCATCTAGTAAAGATGCATTCGGATCATTCTCTTCGAAATGCATGACAATGAAAAGAGATGAACAAGAATTGGAAGAATGGGAACTTTCAGAAAGTCCTCAACATTTTTATGTCAAAGAGAAACCTGCTTATGCCATACAATATTCAGATTTCGAAGCAATGAAAGAAAAATTCGGAAAGTTGTTGCTTGGTGACGATGTTACCGGAGGAACTAAAGGCCTCAATACAGCTTTAGTTCTGTCTAATGCCATCACAAACCTAGCAGTAACGGTTTTCGGAGAGTTGTGGAAATTGGAACCACTATCTGAAGAAAGGAAGAGGAAGTGGTGTAGAGAAATGGATTGGTTTCTGTCTCCTACAAACTACATGGTTGAGTTAGTTCCTTCTAAGCAAAATGGTGCCAATGGTGGAATCTTTGAGATAATGACACCAAAAGCTCGTGCAGATATTGAGATGAATCTTCCAGCACTTCAGAAGTTGGACTCTATGCTTATTGAGACACTAGACTCAATGGTGAATACTGAGTTCTGGTATGCAGAGGGAGGAAGCCAGGGAGAAGAGAGGAATACAAGTGGAAAACAAAAGTGGTGGCTTCCATCACCAAAAGTACCAAGAACTGGTCTTTCTGATGCTGAAAGAAAGAGGCTGCTTCATCAGGGAAGGGTGGTACATCAAGTATTCAAGGCTGCGAAATCTATCAATGATAGTGTGTTGCTTGAAATGCCTGTGCCAACAGTTATTAAGGATGCGCTTTTGAAGTCCGGAAAGGCAAGCCTTGGAGAGGAACTGCACAAGGTTTTAATGGTCGAATTGAGCACCGGAGAAGAAATGCTTAAATATCTCAATTCGAAATCTGAACATAGTGCTCTAGAGACCATCAATAGATTGGAAGCTGCTACACTTTCATGGAAAGACAGAATAATTCAAGAAGATAATGGAAAGTCCCCGGTTCGAATCCCATGGTCATTCATGAAAGACCCTATGTCAGGTATGGATAAGATGGAAATATTGTTGGACCGTGCAGAAACGATTTTAAAGCTACTTAAAACCAGATTCCCGAACCTTCCTCAAACATTTTTGGATGCTGCGAAAGTTCAATATGGCAAGGATATCGGCCATTCGATTTTGGAAGCATATTCCCGAGTTCTTGGAAGTTTAGCCTTCAGCATACTGTCTAGATTAGGAGATATATTGCTAGAGGATTCTTTAAGCAATCCAAATTCACCTGTGGCTACAACTTCCTCTCCTTGGATAAATCTTTCTCACGCTTTGGTGGTTGATTCACGGATCAGGCGTTCATTAATCGATAAGATGAACAAGACAGATAGCCAGCATTGTGATTCTAGTTGTGGTAGTGCATCAGATTTAGAACATTCGTCTATTAAGGCCGAAGCCACCAATACAACTTCTACGCCAAGCCATAGTCGAGTTTGGTGCACTGGTAGAGAGGCTTGTAGAGGTGTGTCTCCTCAGAATTCCCCGTAA 1692 0.4066 MMLVMRKRLACCSRKTKISIDFDGHENRIVTYNDIESSIVDNQSDKDENRTSRGDGCITDSFNDEDSSCSSSKDAFGSFSSKCMTMKRDEQELEEWELSESPQHFYVKEKPAYAIQYSDFEAMKEKFGKLLLGDDVTGGTKGLNTALVLSNAITNLAVTVFGELWKLEPLSEERKRKWCREMDWFLSPTNYMVELVPSKQNGANGGIFEIMTPKARADIEMNLPALQKLDSMLIETLDSMVNTEFWYAEGGSQGEERNTSGKQKWWLPSPKVPRTGLSDAERKRLLHQGRVVHQVFKAAKSINDSVLLEMPVPTVIKDALLKSGKASLGEELHKVLMVELSTGEEMLKYLNSKSEHSALETINRLEAATLSWKDRIIQEDNGKSPVRIPWSFMKDPMSGMDKMEILLDRAETILKLLKTRFPNLPQTFLDAAKVQYGKDIGHSILEAYSRVLGSLAFSILSRLGDILLEDSLSNPNSPVATTSSPWINLSHALVVDSRIRRSLIDKMNKTDSQHCDSSCGSASDLEHSSIKAEATNTTSTPSHSRVWCTGREACRGVSPQNSP 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g1783 563 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 22 554 IPR038937 GO:0005085
Lal16g1783 563 ProSiteProfiles PRONE domain profile. 110 480 IPR005512 GO:0005085
Lal16g1783 563 Coils Coil 400 420 - -
Lal16g1783 563 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 14 22 554 - -
Lal16g1783 563 Pfam PRONE (Plant-specific Rop nucleotide exchanger) 118 474 IPR005512 GO:0005085
Lal16g1783 563 Gene3D PRONE domain, subdomain 1 344 479 - -
Lal16g1783 563 Gene3D PRONE domain, subdomain 1 113 343 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g1783 Lal-Chr16 16917285 16928527 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g1783 - - aprc:113860057 873.233
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g1783 16 16917285 16928527 Lal16g1783 16 16917285 16928527 ECH
Lal16g0394 16 2374601 2388926 Lal16g1783 16 16917285 16928527 PCT
Lal15g0335 15 2265107 2271543 Lal16g1783 16 16917285 16928527 PCT
Lal16g1783 16 16917285 16928527 Lal16g0394 16 2374601 2388926 PCT
Lal16g1783 16 16917285 16928527 Lal15g0335 15 2265107 2271543 PCT