Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g0335 ATGTACAACACACACCATTACCATTTCACCAAACAACAATGCTTTTTCACCTTCCTTCAACCAAGGGAACGGAAAATTAGCATTGATCTTGATCAGCATGAGAGAATTATGACATATAATGGCCTTGAGAGTTGCATCCTAAATAATCAGTCTTATGAAGATGAAAGCAGAACTAGCAGAGGAGATGGATGTATAACTGATTCATTTGATGATGATGATTCCACTTGTTCCTCCAGCAAAGATGCTTTAGGATCATTCTCTTCAAAATGTTTGACAATGAAAAGGGATGAACAAGGATTGGAAGAATGGGAACTCTCAGAAAGTCCTCAACACTTTTATGCCAAAGAGAAACCTTCTTATGCTACCCAACATTCAGATGTGAAAGCTATGAAGGAAAAGTTTGCAAAGCTCATGCTAGGTGAAGATGTTACAGGAGGAACTAAGGGTGTCAGTACAGCTTTCGCACTATCTAATGCCATCACAAGCCTAGCAGTAACTGTTTTCGGCGAGCTGTGGAAATTGGAACCCCTATCTGAAGAAAGGAAGAGCAAATGGCGAAGAGAAATGGACTGGTTATTGTCTCCTACCAACTATATGGTTGAGCTTGTCCCCGCTAAGCAGAGTGGTGCCAATGGTGGAATGTTTGAGATAATGACCCCGAAAGCTCGTGCAGACATCCACATGAATCTTCCAGCACTGCAGAAGTTGGACTCTATGCTTATTGAGGCGCTAGATTCGATGGTGGATACCGAGTTTTGGTATGCTGATGGAGGAAGCCGAGCAGAAAGGAGGGATACAAGTGCACGACAAAGTAAAAGATGGTGGCTTCCATCACCACAAGTACCGAGAACCGGGCTTTCTGACACTGAAAGAAAGAGGTTGCTTCAACATAGAAGGGTTGTATGTCAAGTATTCAAGGCAGCCAAATCTATCAACGAAAATGTGTTGCTTGAAATGCCTGTGCCAGCAAATATCAAGGATGCACTTGCAAAGTCTGGCAAGGAAAATCTCGGAGAGGAACTGCACAAGGTTTTGACTTCTGAATCAGGCTGTGGAGAAGATATGCTTAAATCTCTCAATTTGACATCTGAACATAGTGCCCTTGAGATAGTTAATAGATTGGAAGCTGCTATATTCTCATGGAAAGAGAGAATTGCAGAACATGTCAGTGTCAAATCCTCAGTTCGAGCATCATGGTCTTTTGTAAAGGACTCTATATCCGAAGTTGACAAAATAGAATCACTATTGGACCGTGCTGAAACACTTTTACAGCTGCTTAAAACCAGATACCCTAACCTTCCTCAGACATTTCTTGATGCCACTAAAGTTCAATATGGCAAGGATATTGGTCACTCTATCTTGGAAGCTTATTCCAGAGTCCTTGGAAATTTAGCATTCAGCATACTCTCTAGGATAGGAGATATAATGCAGGAAGATTCAATAAGCAATCCTAATTCACCAGTGGTGACAAGTTGCTCTCCTGGGATAAATCTGTCTGAAACTTGGGTGATTGGTTCACATATCAAACACTCTTTACTTGCTAAGATGAACATAGCTGATGGAAAGTATTGTGATTCTAGTTCTGCTAGTAATTCTGATATAGAACTCTCATCTATTGAGGCCAAAACTAGCTCTGTAATAGCTACACCAAGCCGAAGTCGAGTGTGTTGCATTGGTAGAGAGGCTTGTACAAGTGTGTCTCCTCAAAGTTCGCCATAG 1719 0.4154 MYNTHHYHFTKQQCFFTFLQPRERKISIDLDQHERIMTYNGLESCILNNQSYEDESRTSRGDGCITDSFDDDDSTCSSSKDALGSFSSKCLTMKRDEQGLEEWELSESPQHFYAKEKPSYATQHSDVKAMKEKFAKLMLGEDVTGGTKGVSTAFALSNAITSLAVTVFGELWKLEPLSEERKSKWRREMDWLLSPTNYMVELVPAKQSGANGGMFEIMTPKARADIHMNLPALQKLDSMLIEALDSMVDTEFWYADGGSRAERRDTSARQSKRWWLPSPQVPRTGLSDTERKRLLQHRRVVCQVFKAAKSINENVLLEMPVPANIKDALAKSGKENLGEELHKVLTSESGCGEDMLKSLNLTSEHSALEIVNRLEAAIFSWKERIAEHVSVKSSVRASWSFVKDSISEVDKIESLLDRAETLLQLLKTRYPNLPQTFLDATKVQYGKDIGHSILEAYSRVLGNLAFSILSRIGDIMQEDSISNPNSPVVTSCSPGINLSETWVIGSHIKHSLLAKMNIADGKYCDSSSASNSDIELSSIEAKTSSVIATPSRSRVCCIGREACTSVSPQSSP 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g0335 572 ProSiteProfiles PRONE domain profile. 117 489 IPR005512 GO:0005085
Lal15g0335 572 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 14 29 563 - -
Lal15g0335 572 Coils Coil 409 429 - -
Lal15g0335 572 Gene3D PRONE domain, subdomain 1 119 355 - -
Lal15g0335 572 Gene3D PRONE domain, subdomain 1 356 489 - -
Lal15g0335 572 Pfam PRONE (Plant-specific Rop nucleotide exchanger) 125 483 IPR005512 GO:0005085
Lal15g0335 572 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 29 563 IPR038937 GO:0005085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g0335 Lal-Chr15 2265107 2271543 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal15g0335 - - gmx:100778067 870.152
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal15g0335 15 2265107 2271543 Lal15g0335 15 2265107 2271543 ECH
Lal16g0394 16 2374601 2388926 Lal15g0335 15 2265107 2271543 LSH
Lal15g0335 15 2265107 2271543 Lal16g1783 16 16917285 16928527 PCT
Lal16g1783 16 16917285 16928527 Lal15g0335 15 2265107 2271543 PCT